Pleurodeles waltl (Iberian ribbed newt): 138292694
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Entry
138292694 CDS
T10800
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138292694 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138292694 (ABCA4)
Transporters [BR:
pwl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138292694 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
138292694
NCBI-ProteinID:
XP_069087520
LinkDB
All DBs
Position
4_2:347321738..348368307
Genome browser
AA seq
2363 aa
AA seq
DB search
MMFSKHTKLLLWKNWTLRKRQKLRFCVELAWPLSLFLVLVWLRNANPLYGQHECHFPNKA
MPSAGMLPWLQGIFCNMNNPCFRSPTPGESPGVVSNYNNSILARAYLDVQQVVLAKPEIQ
HMSRIWNELYTMSQFMDTLRTNPGRVAGKGIRIRDILKEDEILTVFLLKDLGLSDSVVFQ
LLNSRVRTEQFAFGVPDLALKDIACSQALLDRFIIFTSRRGMQSVQNALCVLSQQRLQRI
EDVFYANVDFFKLFRLLPTVLDSRSPGIDLQFWGNVLSNISESLQELSQKKSFEDLFYVL
QPILRDGGPSSFSQLMNSLSDLFCGYPEGGGTRVFSFNWYEDNNYKAFLGVNSTSKESTY
FYDTTTTPFCNALIQGLESNPATKIAWSAMKPLLMGKILYAPDSPAVRQILKNANSTFEE
LERLRQVGKTWEEVGPQFWHFFQNSVQMNVIRDTIKNPMVKDFLNRQLSDTSLSAEDVIN
FLYNGHEDDRPLGASNFDWRNVFNFTDRMVRMLNHYMECLTLDKFEGLADESHLAHEALY
LLEENKFWAGLVFLDMYPWTSKLPLHVKYKIRMDIDVVEKTNKIKDRYWDPGPRADPVED
LRYIWGGFAYLQDIIDQGIIKSQTSNGKAFGLYIQQMPYPCFVDDVFMITLNRCFPIFMV
LAWIYSVSMMVKSIVLEKELRLKETMKNMGVSSSTIWCTWFIDSFTVMSVSTLLLTVVIM
GGGVLHYSNPLILYLFLMAFTTATIMQGFLMSVFFSKANLAAACSGVIYFTLYLPHILCF
AWQDRMTFKLKTIMSLLSPVAFGFGTEYLSRYEEQGLGLQWGNIRASPVEADEYSFLFSV
VMMLIDAFLYWVLAWYIDHVFPGEYGIPKAWYFPLLADYWCTFDPPSLGEVDSVVTELSV
HEHTDDFRPGEGENEENKNEIAKEDEQNNAFEKATQKTENKEKHARDAAACKHIEKRVKE
EAREREEKQRRDEEEKERKDKDEVTNKANSFFEPEPPGMIAGVRVQELVKVFPNTYKPAV
DRMNITFYEGQITAFLGHNGAGKTTTLSIITGLYPPTHGTVFVRGRDIQTHMDTIRQSLG
MCPQHNILFQHLTVAEHILFYAQLKGKSKEQAEKEMEDMLGDVGIPQKRDEEAQYLSGGM
QRKLSVALAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYRQGRTIILSTHHMDEADLL
GDRIAIISQGKLYCSGSPVFLKNCFGTGFYLTMVRRMRNIKDPGRKETGSCKSDCSCLCP
SCSPKNKDVSLEQELDGDVSAITELVYHHVPDAKLIESIGQELVYLLPSKDFKHRAYASL
FRELEETLGDLGLSSFGISDTPLEEIFLKVTADSGAGTGNPEEWMLEQRKSRTSLGDNAA
TVVHVDQNKGTDITNAPQATAQKPSEKCPAEDLHQRAPGTDGKGSRQVKDSDLVHQQFRA
LFIKRFHHAMRSRKDFFAQIVLPASFVLLAMIFTLIVPPFGEYPSLTLHPWIYGQQFTFF
SNERPGSEQMAGLADAFLNKPGFGTRCMKDEPLLKYPCKNTTNEWTLPQVSASVTNLLLA
HQWTSDDPSPSCQCSTKNKLIMLPECPEGAGGRPPPQRVQSSTDILQDLTERNISDFLVK
TYPSLIRSSMKTKYWVNEQRYGGFSIGGKLPAVPFTGEQFNNVFSHIGQMLNVTGGSRTK
AVSGEIQNFLTELEKEDNIKVWFNNKGWHALPIFINVASNAILRVNLRDGQPSEEFGITT
MNHPLNLTKDQLSEVTVLTTSVDVVVAICVIFAMSFIPASFVLYLIQERVSNAKHLQFVS
GVTPTVYWLSNFAWDIANYSVSAIMVVAIFVGFNKKAYTSSNNLPAFIILLFLYGWSVIP
MMYPASYLFNVPSTAYVALSCLNLFVGINSSAITFILDLFENNRALLKFNERLKDVLIVF
PHFCLGRGLIDLAMNQAVTDVYAKFGEEHVSNPFQWEFLGKNVFAMAVEGVVYFAINLFI
QHQFFLTKWFSEPPKEPIIDEDEDVAQERQRITKGGGKTDILRLNDLSKTYTGKHSPAVD
RLCIGVRPGECFGLLGVNGAGKTTTFKMLTGDIDVTSGDATVAGYSILTNIAHAHQNMGY
CPQFDAIDDLLTGREHLQLYGRLRGIPAEEVDMVAAWGIEKLGLTKYADVIAGTYSGGNK
RKLSTAIALIGCPPVVLLDEPTTGMDPHSRRFLWNSIVSIIKDGRAVVLTSHSMEECEAL
CTRLAIMVKGSFKCLGTIQHLKYKFGDGYVVTMKVKAPKAGFAPDSASAEKFIQAHFPGC
VQREKHYNMLQYQISSSSLARIFQLLISNKENLNIEEYSVSQTTLDQVFVNFAKHQTEDE
DIRLHPRAAGASRAVKVTPSPAS
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcagcaaacataccaaactgcttctttggaagaactggaccctcagaaaacga
caaaagttacgtttttgtgtggagcttgcctggcccttgtcgctcttcctagtcctggtc
tggctgcgcaatgctaacccactctacggccagcatgaatgtcattttccaaacaaggcg
atgccttcagcgggcatgctgccttggctacaggggattttctgcaacatgaataacccc
tgcttccgaagcccgacccccggagagtcgcccggtgttgtgtcaaactacaataattcc
atactggctcgtgcatatctagatgttcaacaggtggtgctcgcaaagccggaaatccag
cacatgagccgaatctggaacgagctgtacacgatgtcgcagttcatggacacattaagg
acgaatcctggaagagtcgcaggaaaaggcattcgaatcagggatatcttgaaagaggat
gaaatcctgacggtcttcttgctgaaagacctgggcctctctgactctgtggtgttccag
ctccttaattcgcgagtgcgcactgagcagtttgcatttggagtgcccgacttggccctg
aaggacatagcctgcagccaggccctcctggaccgcttcatcatcttcaccagccggcgg
ggtatgcagtcggtgcagaacgctctgtgcgtgctctctcagcagcggctgcagcgcata
gaagacgtcttctacgcgaacgttgatttcttcaaactgttccgactgcttcccacagtg
cttgacagtaggtcccccggtattgatctacagttttgggggaacgtcttatccaacatc
tcagaatcactacaagagttatcccagaagaagagttttgaagacctgttctatgtgctc
caaccaatactacgagatggcggacccagctcattcagccagctaatgaactccctctct
gacctcttttgcggctacccagagggtggtggcacacgggtcttctctttcaactggtat
gaagacaacaactacaaggccttccttggcgtaaactccaccagcaaggaatcgacttac
ttctatgataccacaaccactccattttgtaacgcactaatccagggcctggaatccaat
cctgcgaccaaaattgcctggagcgccatgaagcctctgcttatggggaagatcttatac
gcgccggactcccctgcagtccgacagatactgaaaaatgcgaacagcacatttgaggag
ctagagcgtcttcgacaagtggggaagacctgggaggaagtagggccacagttctggcac
ttcttccaaaacagtgttcagatgaatgtgattcgcgataccataaaaaaccccatggtc
aaggacttcctgaacagacaactgtcagacacaagtttatcggcagaagacgtgataaac
ttcctttataatggccacgaggacgaccgtccactaggcgccagcaattttgattggcgc
aacgtcttcaatttcacggaccgcatggtgcgcatgttgaaccactacatggagtgtctg
actcttgataaatttgaaggcctcgccgatgagtcccatttggcacatgaagcactctat
ctgctggaggagaacaaattttgggccgggctggtattcctcgacatgtacccatggaca
agcaagctgccactacatgtgaagtacaagattcggatggatatcgatgtagtggagaaa
acaaacaaaatcaaagacaggtactgggatccaggccccagggctgacccggtggaagat
ctgcggtacatctggggtggcttcgcctacctgcaggacatcattgaccaagggattatc
aagagtcaaaccagcaatggcaaggcctttgggctttacatccagcagatgccgtacccc
tgctttgtggacgatgtgttcatgatcacattgaaccgctgcttccctatctttatggtg
cttgcctggatttactcagtgtccatgatggtgaagagcatagtgctggagaaagagctg
cgactgaaggagaccatgaagaacatgggtgtctccagttccaccatttggtgcacatgg
ttcatagacagcttcacagtgatgtcagtgagcaccttactcctcaccgtggtaattatg
ggtgggggggtgctccactacagcaacccacttattctctacctgtttttgatggccttc
accacggcaaccatcatgcaggggttcctgatgagcgtcttcttctccaaggccaacctg
gcggctgcctgcagcggggtcatttacttcaccctctacctgccacacattctctgcttt
gcctggcaagatcgcatgacattcaaactcaaaaccattatgagcttgctgtctcccgtc
gcttttgggtttggaacagagtatctgtctcgctatgaagaacaaggccttgggctgcag
tggggcaacatacgggccagcccggtagaggctgatgaatacagcttcctgttctccgtc
gtcatgatgctcatcgatgcctttctgtattgggtgctggcgtggtatatcgatcatgtc
tttccaggagagtacggcataccgaaggcttggtatttccctttattggccgactactgg
tgcacgtttgacccaccatcgctcggagaggtggactccgtcgtaactgagctttcagtc
catgaacacacagatgacttccggcctggtgaaggagagaacgaggaaaacaaaaatgag
atcgccaaggaagatgaacagaataatgcatttgagaaagcaactcagaagacagagaac
aaggagaaacacgcccgggatgcagcagcctgcaagcacatagagaagagggttaaggaa
gaggcacgagagagagaggaaaagcaaagaagagatgaagaagagaaagagcgaaaagac
aaagacgaggtgacaaataaagcaaactcatttttcgagccagagccaccaggtatgatt
gctggagtccgggttcaagagctggtgaaagttttcccgaacacctacaagccagctgtg
gacagaatgaacatcactttctatgagggccagatcacggccttcctgggtcacaatgga
gcagggaagacaacaaccttgtcgatcataacgggcttgtatccgcccacacatggcacc
gtattcgtccgaggtagagatatccaaacccatatggacaccatccggcagagcctggga
atgtgtccgcagcacaatatactcttccaacacctgacagtggcagaacacattctgttc
tatgcccagctaaaaggcaaatccaaggagcaggcggagaaggagatggaggacatgctg
ggagacgtgggcatcccacagaaaagagacgaagaggctcagtacctgtcaggtggaatg
cagaggaagctatctgttgccttggcatttgtgggcgaagcaaaggttgtggttttggat
gaaccaacatctggtgtagacccctattcccgaaggtctatctgggatcttttgctgaaa
tatcggcaaggccgcactattatcctttccacacatcacatggatgaagcagacctccta
ggtgatcggatcgctattatttcacaagggaagctctattgctctggttcccctgtcttc
ctgaagaactgctttggtactggtttctacctcacaatggttcgtcggatgaggaacatc
aaagatcctggcagaaaagaaacaggctcttgtaaatctgattgctcctgcctctgtccc
agttgctcgcctaagaacaaagatgtatccctggagcaagaactagatggtgatgtgagt
gctatcacagagctggtttaccaccatgtccctgatgctaagctgattgaaagcattgga
caggagcttgtctacctccttcccagcaaagacttcaagcaccgggcctatgcaagcctc
ttcagggagctggaggagaccttaggagacctagggctgagcagctttgggatttcagac
accccactggaagagattttcttgaaggtcacagcagattctggagctgggacaggaaat
ccagaggagtggatgctagaacagaggaagtccagaacaagcctgggggacaatgcagca
acagttgtccacgttgatcaaaataaaggcacagatattacaaatgcaccacaagcaact
gcacaaaagccttctgaaaagtgtcctgctgaagaccttcatcagagggctcctgggact
gatggcaaaggctcccggcaggtcaaggattctgaccttgtccatcagcagttcagagcg
ttgttcatcaagcgattccaccatgccatgcgcagccgtaaggacttctttgcacagatc
gttctcccagcaagttttgtgctgctagcgatgatatttacactcatcgtacctccgttt
ggagaatatcctagtctaacattacacccttggatttacggacagcagtttacattcttc
agcaatgaaaggccaggcagtgaacagatggctggccttgctgatgccttcttgaacaag
ccaggatttggaacacgctgtatgaaagatgaaccacttttgaaatacccttgtaaaaat
actaccaacgaatggacgcttccgcaagtctctgcaagtgtcaccaatctacttttggct
caccagtggacttctgacgacccctcgccgtcctgccagtgcagcaccaagaacaagctg
atcatgctcccagagtgccctgaaggtgctggggggcgccccccacctcagagagtacag
tcaagcacagatatacttcaagacctcacagaaaggaacatctcggatttcctagtgaaa
acataccccagtctcatacgaagcagcatgaagaccaaatactgggtgaatgagcaaagg
tatggcggtttttcgataggcgggaagctcccagctgtgcctttcaccggagagcagttt
aataacgtcttcagtcatattggacaaatgctgaatgtaacggggggttctagaacaaaa
gcggtgtccggagaaattcagaattttctcaccgagctggaaaaagaagacaatatcaag
gtgtggtttaataacaagggctggcatgcactgcccatttttattaatgttgccagcaat
gccattctgagagtaaacctcagagatgggcagccctcagaagaatttgggatcacgacc
atgaatcatccactcaacctcaccaaagaccagctttcagaagtcacagtgttgactact
tcagtggatgtggtggttgccatctgtgttattttcgccatgtctttcattcctgccagt
tttgtcctatatctgatccaggaaagggtttccaatgctaagcatctccagtttgtcagt
ggtgttactcccaccgtttactggctgagcaactttgcatgggacattgcaaattattct
gtgagtgctattatggttgtagctatattcgtcggatttaacaagaaagcttacacttct
tcaaacaacctcccagcgtttatcatattactctttctctatggatggtccgttatccct
atgatgtacccagcatcctacctcttcaacgtgcccagcactgcctatgtcgctctctcg
tgtcttaatctgtttgttggcataaacagcagcgccattacatttattctcgatttgttt
gaaaacaacagagctttgttgaaatttaatgaaagactgaaagatgtactaattgtcttt
ccacatttctgcctgggccgtggtctcattgacttagccatgaatcaagcagtaacagat
gtatatgctaaatttggtgaagaacatgtatcaaatccattccagtgggaatttcttggc
aagaacgtgtttgcgatggcagtagaaggagttgtttactttgcgattaatctctttatc
cagcaccaattctttctcactaaatggttttcagaacctcctaaggagccaatcatcgat
gaagatgaagatgttgcacaggagaggcaacgaataacaaaaggtggaggcaaaaccgat
attttgagactaaatgacttgagcaagacttatacaggtaaacacagcccagcggtggac
agactctgcatcggtgtccgtcctggagagtgttttggcctacttggggtgaatggtgca
ggcaagacaaccacattcaaaatgttgacaggcgatattgatgtgacatctggagatgcc
acagtggctggttatagtatcttgaccaacattgctcacgcccaccaaaacatgggctac
tgtcctcaatttgatgctattgacgatctgcttacaggccgcgaacaccttcagctttat
gggcgcctcagaggcattccagcagaggaagttgacatggtggcagcttggggcattgaa
aaactggggctcacaaaatatgcagatgtgatcgctgggacgtacagtggcggcaacaag
cgcaagctgtccactgctattgctcttataggatgtcctcccgtggtgctgctggacgaa
ccaacgacagggatggatcctcattcccgccgcttcctgtggaattcgatcgtcagtatc
atcaaagatggacgggcggttgttttgacatcacacagcatggaagaatgcgaagctctc
tgcacccgactggctataatggtgaaggggtccttcaagtgcctgggcacaatacaacat
ctaaaatacaaatttggagatggatacgtcgttacaatgaaggtcaaggcacccaaggcc
ggctttgctcccgactcggcctcagcggagaagtttatccaggcccacttccctggctgt
gtacaaagggagaaacactacaatatgttgcagtaccagatttcctcctcttcactggcg
agaatatttcagttgcttatctccaacaaggaaaacttgaacattgaagagtactctgtt
tcacagaccaccttggatcaagtttttgtgaactttgctaaacatcagactgaagatgag
gatatccgcttgcatccccgggccgcaggagccagccgagcagtgaaggtgactccatct
ccagcttcatag
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