Pleurodeles waltl (Iberian ribbed newt): 138292789
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Entry
138292789 CDS
T10800
Symbol
SEC16B
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138292789 (SEC16B)
Membrane trafficking [BR:
pwl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
138292789 (SEC16B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
138292789
NCBI-ProteinID:
XP_069087660
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All DBs
Position
4_2:397503817..397788642
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AA seq
1057 aa
AA seq
DB search
MDPGVTPWHSTPRGRPPAGIVPWRGRYLHRPIPVFNHSDSNYYQTADPRREYPHWPGDWG
EVRQQRQPAAYSRPQSRAEVYERDTYTYRPHSRQSYEDMYHAYPMPAPGGDYQAYYHMQP
RPTLEEQDWKQMECYRQQGHYWDPGYYGAHKVEQENSHLPSREGALYRTNNYEESYVRTT
EQERNGEDFKSNTQEDSGVLQNEFISPQAPSFAEHSLLQQYKESGLSSSSYELSQYMCDS
SDLCPPEPLNPVTTEETSLSASPQSFTPLKYCLPHVAVCFGAVGQMVRVCPNYPTEGQPA
IIEIHSLEVILHDTQEQEEMRAFLGPLIREDLHKGDILSFCQRKLELIKQLNAIRSRDTV
LLWQLLVLLCRQNGSMVGSDIADLLMKDCKREKYKKQDTNGNLINLNDDSWPAPAADTQD
LLTGEVPSCTETIKQAVEKFTKLLFYGRKKEALDWAMRSQLWGHALFLSSKMDLRTYSWV
MSRFTSSLAHNDPLQTLFQLMSGRIPQACTCCGDSKWGDWRPHLAVILSNQVADADLTRR
SILVMGDTLAMKGLTEASHFCYLVASVPFGFYSVKKDSLVLLGSNHSHSKTFKAFATTEA
IQCTEILEYCRQLGQAGYYIPSFQVYKLIYASRLADYGLVSQAFHYCEGIAGAILAQEGG
SVLLAELFKLADRLKFSDPCLEERPGLDPPWLVQLQIRWRHLQAECGFGDRTTGHLLIKD
APTEGCLDHKEPSHSHEHLQSDSRTQGDGHSQAADTYADHAAGTAICHLGTPYHPSEPWA
TEWQNSQVSGEGPVLSNSRKEARPGGYNEMKALPEKMAQDPSPAMYQPPGGAPLVGGIWE
SHARLAHGANAHVQQHMPVPRVRTVSECSTISVDEDATPPQNGGTTETTEQSHQTQDGNQ
ELTENKKASGSGWFSWFRSKSTKEETVPSSKAVSTGDSTPVSHPNATAVQGVTPNLPPPP
PTMSSVPPPPSALLSQSARNPFSRTAGNKPPSDGCDSRTFPLSPMEMRLDPAVSSGDLSP
PGAGSVPLYNPSQVSSVVGSTQNHQPKLSQRRYPIQS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaccctggagtaaccccatggcactccacaccacgggggcggcctcctgctggcatt
gttccttggagaggcaggtacctccataggcctattccagtcttcaatcacagcgacagc
aattattaccagactgctgatcccaggcgcgagtaccctcattggcctggtgactgggga
gaagttcgccagcagcgccagcctgctgcctactcaaggccacaatccagagctgaggtt
tatgaaagggacacttatacctacagaccacattcaaggcaaagctacgaggatatgtat
catgcttatccaatgccagcccctgggggagattatcaagcatattatcacatgcagccc
agaccaacactagaggaacaagattggaagcagatggaatgctacaggcagcagggtcat
tactgggaccctgggtactatggagctcacaaagtggaacaggagaacagccaccttccc
tccagggaaggtgctctgtacaggacaaacaattatgaagaaagctatgtcaggaccaca
gagcaggagagaaatggagaggattttaaatcgaacactcaggaggattctggtgttttg
caaaatgagttcatctctcctcaggctcccagctttgcggaacacagtttgcttcaacag
tacaaagagtcaggcctttcttccagcagctatgagctcagccagtacatgtgtgactcc
tcagacctgtgcccacctgagcccttgaatccagtgacaacagaagaaacttctctttct
gcctcccctcagtcgtttacacccctgaagtactgcctaccacatgtggcagtctgtttc
ggggcagtgggacaaatggttcgtgtatgccctaactatcccactgagggacagccagca
atcattgaaattcacagcttggaggtcattcttcatgacacacaggagcaggaagaaatg
cgggctttcttggggccactgatcagggaggatttgcacaaaggagacattctcagtttc
tgtcagcgcaaattggaactgataaagcagttgaatgctataaggagccgagacactgtc
ctgctctggcagctcctggtgcttctctgccggcagaatgggtccatggttgggtcagac
atcgcggatctcctaatgaaggactgcaaacgtgaaaagtacaaaaagcaggacacaaat
ggcaacctgatcaatctcaatgacgattcatggcctgccccggctgctgatacacaggat
ctgctcacaggagaagttccaagctgcacggagaccataaagcaagcagtagaaaagttt
actaaacttctcttttatggcagaaaaaaggaggcattggattgggcgatgcgaagccag
ctctggggtcatgccttgtttctgtcgagcaagatggatctgaggacctacagctgggtg
atgagtaggttcaccagctccctagcgcacaatgatccactgcagaccctgttccagctg
atgtctggccggatcccacaggcatgcacgtgctgtggggattcaaagtggggtgactgg
aggccacatctagctgtgattctttccaaccaagtggcagatgcagatctgacccgccgc
tccattttggtcatgggagacactctagctatgaaggggttaacagaagcgtctcatttc
tgctacttggtggccagtgtcccttttggcttctacagtgtgaaaaaagactctctggtt
ctcttgggctccaatcacagccacagtaagaccttcaaggccttcgctaccactgaagcg
atccagtgtaccgagatcctggagtactgtcggcagctgggacaggccggatattacatc
ccttccttccaggtgtataagcttatctatgcgtcccggctggcagactatgggctggtg
tctcaagcttttcattactgcgaggggattgcaggagccatcttggcccaggagggtggt
tctgtgctcctggcagaactctttaagctggctgacaggctgaagttctctgacccctgt
ctggaggagaggccagggctggaccctccgtggctagtacagctgcaaatccgctggagg
catctccaggcagagtgtggctttggtgacaggaccacgggtcacttactgatcaaggac
gcgccaacagaaggttgcctggaccacaaagagccatctcacagccacgagcatctgcaa
agtgattcaagaacccagggagatgggcatagccaggcagcagacacctatgctgaccat
gcagcaggcacagccatctgccatctaggaaccccctaccacccctccgaaccgtgggcc
actgaatggcagaacagtcaggtgtcaggggagggtcctgtgctgtctaattctcggaag
gaagctcgtccaggcggctacaatgaaatgaaagcactgccggagaaaatggcgcaggac
ccgagtccagcgatgtaccaacctccagggggcgccccacttgtggggggaatctgggag
agccatgcaaggcttgcacatggagcaaacgcccacgtacagcagcatatgccagtgccc
agagtaagaacggtgtctgaatgttccactatctcagtggatgaagatgccacaccacca
cagaatggaggcaccacagagaccacagagcagtctcaccagacacaagatggtaaccaa
gagctgacagaaaacaagaaggcctcaggatctggttggttcagttggtttcgctcaaaa
tctacaaaggaagaaacagtgccctcctctaaagcagtatccactggcgattctaccccg
gtatcgcaccccaacgcaacagcagtgcagggagtgactccaaacctgcccccaccacca
ccaacaatgagctcggttccacccccacctagtgctctgctgtcgcagtctgcaaggaac
ccgttctccaggactgcaggtaataaacccccatcagatgggtgcgacagtaggaccttc
cctctttctcccatggagatgcgactagatcctgcagttagcagcggggacctatctcca
ccaggagcaggcagtgtcccactgtataatccttcccaggtttcctctgtggttggcagc
actcagaatcaccaaccgaaactctctcaacgacgttatcctatacagtcttag
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