Pleurodeles waltl (Iberian ribbed newt): 138292793
Help
Entry
138292793 CDS
T10800
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04115
p53 signaling pathway
pwl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138292793 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
138292793 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138292793 (COP1)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138292793 (COP1)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138292793 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
138292793 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
zf-C3HC4_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Beta-prop_EML
Beta-prop_DCAF4
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
zf-rbx1
WDR90_beta-prop_4th
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
zf-RING_4
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
138292793
NCBI-ProteinID:
XP_069087666
LinkDB
All DBs
Position
4_2:402032152..402725581
Genome browser
AA seq
665 aa
AA seq
DB search
MSSSSAPAGSGGPPSSPPSSSSAPPRPGLGRLGGARGPSRKRPLLSPLCSGDSGFQEMPG
GGGGYQDKSSDFLCPICFDMIEEAYMTKCGHSFCYKCIHQSLDDNNRCPKCNYVIDNIDH
LYPNFLVNELILKQKQRFEEKRFKLDPSNGHRWQIFQDLLGTDQDNLDLANVNLMLELLV
QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMTGLYSPV
SEDSTVPQFEAPSPSPSSLIDSTEYSQSPGFSGSSQTKKQPWYNSTLASRRKRLTAHFED
LEQCYFSTRMSRVSDDSRTTNQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSS
IEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLL
ASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLD
NSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAK
FVNGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYL
YYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRAMPDGESNVLIAANSQGTIK
VLELV
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcggcccccgctgggtccggcggccccccgtcgtcgcccccctcgtcc
tcgtcggcgccccccaggcccggcctggggcggctcggcggggcaagaggcccgagtagg
aagaggccgctcctaagccccctttgcagcggcgacagcggctttcaggagatgccgggg
ggcggcgggggctaccaggataagagcagcgactttctatgccccatctgctttgatatg
attgaagaagcctacatgacaaagtgtggacatagcttctgttacaagtgcattcatcag
agtctggacgacaataaccgatgccccaaatgtaactatgtaatcgataacattgatcat
ctgtaccctaattttttagtgaatgaactcatcctgaagcagaagcagcggtttgaagag
aagagattcaagctcgacccttcaaatggccaccggtggcaaatcttccaagacttactg
ggaactgaccaggacaacttggatttggccaatgtgaacttaatgcttgagcttctggta
cagaaaaagaagcagctggaggcggaatcccacgctgctcagttgcaaatcctcatggag
ttcctcaaggtggcccggagaaataagcgagagcagttagagcagatccagaaggaacta
agtgtcctggaagaagacatcaagagagtggaggaaatgactggtttgtactcgccagtc
agtgaggacagcacggtgccgcagtttgaagcaccctctccttcaccaagcagccttatc
gattcgacagagtacagtcagtcccctggcttcagtggcagttcacagactaagaaacag
ccatggtacaacagcaccttagcgtcccggcggaagcggctcacagcacactttgaggat
ctggagcagtgctacttctccaccaggatgtcccgtgtctcagatgacagcagaacgaca
aaccagctggatgaattccaggagtgcctgtccaagtttacacgttacaactctgtccgg
cccttggccactttatcgtatgctagtgacctctacaacggctcaagcattgtatccagc
attgaatttgaccgggactgtgactactttgcaattgctggggtgacgaaaaagatcaaa
gtgtacgagtacggcacagtcatccaggatgcagtggatatccactacccagagaatgag
atgacttgtaattccaagatcagctgtatcagctggagcagttaccacaagaacctttta
gctagcagtgactatgaaggcacagtcatcctttgggacgggttcactgggcagagatca
aaggtgtatcaggagcacgagaaaaggtgttggagtgtcgatttcaacttgatggacccc
aaacttctggcttccgggtctgacgatgccaaagtcaaactctggtccaccaacctggac
aattccgttgcgagcattgaagcaaaggctaacgtctgctgcgtcaagttcagcccctct
tcacgttaccatctggccttcggctgtgcagatcactgtgtccactactacgacctgcgc
aatacgaagcaaccaatcatggtgttcaaaggccaccgcaaggcagtctcctatgcaaag
tttgtcaacggtgaagaaatagtttctgcgtccacagacagccagttgaagttgtggaac
gtggggaagcctcattgccttcgctccttcaagggtcacatcaacgagaagaactttgtc
ggccttgcctccaacggggattacattgcctgcggtagtgaaaacaactctctctacctg
tattacaagggactctcaaaaacgctgctcacttttaagttcgacacagttaaaagtgtg
ctggacaaggatcggaaggaggatgacaccaatgaattcgtcagcgccgtgtgttggcgg
gcgatgcctgatggggaatccaatgttctgatagctgctaacagccaaggtacaattaag
gtgcttgagctggtatga
DBGET
integrated database retrieval system
