Pleurodeles waltl (Iberian ribbed newt): 138292827
Help
Entry
138292827 CDS
T10800
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00310
Lysine degradation
pwl00514
Other types of O-glycan biosynthesis
pwl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
138292827 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
138292827 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pwl01003
]
138292827 (COLGALT2)
Enzymes [BR:
pwl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
138292827 (COLGALT2)
Glycosyltransferases [BR:
pwl01003
]
O-Glycan biosynthesis
O-linked Gal type
138292827 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
138292827
NCBI-ProteinID:
XP_069087729
LinkDB
All DBs
Position
4_2:complement(414761247..414969875)
Genome browser
AA seq
613 aa
AA seq
DB search
MVPGAPRLLLLALCLGGCPPCLSWSPPEPGPYPESAPQSPTVLVALLARNAAHTLPHQLG
ALERLDYPKGRMAIWAATDHNVDNTTAVLKEWIRNVQKLYHSVEWRPMEEPKLYPDEIGP
KHWPASRFGHVMKLRQAALKAAREKWADYILFVDADNFLTNPQTLKLMIAENKTIVAPML
ESRSLYSNFWCGITPQGYYKRTPDYVLIREWKRMGCFPVPMVHSTFLIDLKKEASTQLRF
HPPHKDHTWAFDDIIVFAFSSRQADVQMHICNREHYGYLSVPLKSHQNLLDDIENFIHVQ
TEAMIDRPPMEPSQYVYLPPKYSDSMGFDEIFMINLKRRKDRRDRMLRSLYEQEIKVQIF
DAVDGKALNSSQLRAMKIDMIPGYHDPYSGRELTRGEIGCFLSHYYIWKEMVDRNHEQVL
VIEDDVRFENQFKRKLMKVMNDIEEAQLEWDLIYIGRKRMQVQRPEKAVPNVMNLVEADY
SYWTLGYAISLQGAKKLLAADALNKMLPVDEFLPVMYNKHPVAKYMEYFEPRDLKAFSTE
PLLIYPTHYTGDEGYISDTETSTIWDNETVTTDWDRAHSWKTQQQGQINTDAQNTDALPP
QASMDTSSSRDEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtccccggagccccccggctgctgctgctcgccctgtgcctgggaggctgcccgccc
tgcctctcttggtccccgccggagccagggccctacccggagtcggcccctcagagcccc
accgtgctcgtcgcacttctggcgcggaacgctgcacacactctgccccaccagttgggg
gcgctggagcgcctggactaccccaaggggcgcatggctatctgggcagcaaccgatcac
aacgttgataacaccacggcggttctaaaggagtggatcaggaatgtgcagaaactgtac
cactctgtggaatggcgaccaatggaggagccgaagttgtatccagatgaaattggaccc
aagcattggccagcatcgcgatttggtcacgtcatgaagctgaggcaggctgcactgaaa
gctgcgagagaaaaatgggcagactacatattgttcgtggatgcagacaacttcctgacg
aacccccaaaccctgaaactgatgatagctgaaaacaaaacaattgtggctccgatgttg
gaatctcgcagcctgtactccaacttctggtgtggaatcacacctcagggatactacaaa
agaacacctgattatgtcctaattagagagtggaaaagaatgggctgtttccctgtccca
atggtacactcaacgtttctcattgacctgaagaaggaggcgtcaacgcagctccgattt
catccaccgcacaaggatcacacttgggcctttgatgatatcatcgtatttgcattctcc
agcagacaagccgatgtccaaatgcatatctgcaaccgagaacactacggatatctatct
gtgccattgaaatcacaccagaatctcctagacgatattgagaacttcatccatgtgcag
accgaagcaatgattgatcgtccacccatggagccatcacagtatgtgtacctacctcca
aaatactcagacagcatgggttttgacgagattttcatgataaacttaaaacgcaggaag
gatcgtagagatcgaatgcttcggagcctgtacgagcaagaaatcaaagtgcagattttt
gatgcagtggatgggaaggcactgaactcgagccagctaagagcgatgaaaatcgacatg
atacctggctatcacgacccctactcggggagagagcttacacgtggcgaaatcggctgt
tttctcagccactactacatatggaaagagatggtggacagaaaccatgagcaggtcctg
gtcatcgaagatgatgtccgctttgagaaccaattcaagagaaagctcatgaaagtgatg
aatgacattgaagaggcgcagctggagtgggacttgatatatattggtcgaaaacggatg
caggtacaacgccccgaaaaggctgttccaaatgtgatgaatcttgtcgaagcagattac
tcctactggacactggggtatgctatctctctgcagggggctaagaaactccttgctgcg
gatgcgctaaataagatgctgcccgtggatgagttccttccagtaatgtacaacaagcac
ccagtggcaaagtacatggaatactttgagccgagggacctgaaggcgttttccaccgag
ccgttgctcatctacccaacacattacactggagatgaggggtacataagcgacacagaa
acttccaccatctgggataacgagactgtgaccactgactgggaccgtgcccactcttgg
aaaacacaacagcaggggcaaataaacactgatgcccaaaacacggatgccctgcctccc
caggcgtctatggacacgtcttcctccagggatgaattatga
DBGET
integrated database retrieval system
