Pleurodeles waltl (Iberian ribbed newt): 138292930
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Entry
138292930 CDS
T10800
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04136
Autophagy - other
pwl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138292930 (ATG4D)
04136 Autophagy - other
138292930 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pwl01002
]
138292930 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138292930 (ATG4D)
03029 Mitochondrial biogenesis [BR:
pwl03029
]
138292930 (ATG4D)
Peptidases and inhibitors [BR:
pwl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
138292930 (ATG4D)
Membrane trafficking [BR:
pwl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
138292930 (ATG4D)
Mitochondrial biogenesis [BR:
pwl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138292930 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
138292930
NCBI-ProteinID:
XP_069087912
LinkDB
All DBs
Position
4_2:complement(473214830..473289751)
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AA seq
494 aa
AA seq
DB search
MNSVAPSALQYGNVGQEVTLHRSDEGTAPAVRSSLTERNCKGLFARPESPQSGELDEVDK
IKSKLMSAWNNVKYGWAVKTKTSFNKSSPLHLLGRCYSLDREDNIERFQKDFVSRVWLTY
RREFQALEGTLWTTDCGWGCMLRSGQMLLAQGLLVHILTRDWTWPEALFVNLVEMEPLLT
GSPSRSSTLNWSPGTTIPTDRTSTRWDIMTSVRKASPQDPAKEHLHRKILSWFSDHPRAP
FGVHHLVELGKSSGKKAGDWYGPSIVAHIIRKAVRSSSEVSNLAVYVSQDCTVYKADVQR
LLEGDGTSQLGPSAECCSVIILVPVRLGGENLNPVYISCVKEILKLEFCIGIIGGKPKHS
LYFIGYQDDFLLYLDPHYCQPFVDAEKDNFPLETFHCNFPRKLPFSKMDPSCTLGFYVRN
RKEFDTLCLELARVLTFSSSKDIYPIFSFVEGHAQDFALDELCSQIAEQTVHISRRTETR
GKVKRLSSDEFVFL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgtcgcccccagcgctctgcagtatgggaatgttggccaagaagtcaccctg
cacaggtccgatgagggcactgcacctgctgtacggtcgtccctcacagagaggaactgc
aaaggtctgtttgcccgcccggagagtcctcagtcaggagagctcgacgaggtggacaag
attaaaagcaagctaatgtctgcttggaacaacgtgaaatacggttgggccgttaaaacg
aaaactagtttcaacaagtcatcccctctgcatctcctggggcgttgctactctttagac
cgtgaagataacattgagaggtttcagaaggactttgtctccagagtctggcttacatac
cgacgggagttccaggcactggaggggacgttgtggacaacagactgcggctggggctgc
atgctacgcagtgggcagatgcttttggcacaggggctcctggtgcatatcctcacccga
gattggacatggcctgaagctttgtttgtgaacctggtggagatggagccgctgctgact
ggctccccctccaggtcctcaaccctgaactggagtcctggcaccaccattccgacagac
agaacaagtaccagatgggatatcatgacatctgtccgtaaggcaagtccacaagacccg
gcaaaggagcatctccaccggaagattctgtcctggttcagtgaccacccaagggctcca
tttggagttcaccaccttgttgagctcggcaaaagctcagggaaaaaagctggtgactgg
tatgggccatccatcgtagctcatataatcagaaaagcagtacgtagctcttctgaagtc
tctaacctagctgtgtatgtatctcaggactgtacagtgtacaaggcagatgtgcaaaga
ctactggaaggtgacgggacttctcagctgggccccagtgccgaatgttgctctgttatt
atattggtacctgttcgtctgggcggggagaacttgaatcctgtctacatcagctgtgtc
aaggagattcttaaacttgaattttgtattgggattatcggtggaaaacccaagcattca
ctctacttcatcggatatcaagacgacttcctgctgtacctggacccacactactgccag
ccttttgtggatgctgaaaaagataactttccgctagagactttccactgcaactttccc
aggaaactccctttcagcaaaatggatcccagctgcacgctgggcttctacgtccgaaac
cgcaaggagtttgatactctgtgtttggaactggcaagggtgttgaccttctcatcgtcg
aaggacatctatcccattttcagctttgtggagggacatgctcaggacttcgccttggac
gaactgtgctcacaaatcgctgaacagactgtgcacatctctcgccggacagagacacgg
gggaaagtcaagcggctaagctcagatgaatttgtctttttataa
DBGET
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