Pleurodeles waltl (Iberian ribbed newt): 138293115
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Entry
138293115 CDS
T10800
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138293115 (PTBP2)
Spliceosome [BR:
pwl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138293115 (PTBP2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_NFXL1
MSP1a
Motif
Other DBs
NCBI-GeneID:
138293115
NCBI-ProteinID:
XP_069088235
LinkDB
All DBs
Position
4_2:587019531..587154943
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AA seq
537 aa
AA seq
DB search
MDGIVSDVAVGVKRGSDELLSGSVLNGPNTNMSSIVVTANGNDSKKFKGDDKMDAAPSRV
LHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLEMGSEEAAITMVNYYTTMTPS
LRNQPVYIQYSNHKELKTDGPLNQRAQAVLQAVTSVHTSNSSLAGTTGDISVSSGQSPVL
RIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQ
NIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQPSLDPAIAAAFAKETSLL
GLPVTAVPGTLSPMGIPNAAAAAHAHAHAAGRAGMGGMTPGVYTVLLVSNLNEEMVSPQS
LFTLFGVYGDVQRVKILYNKKDSALIQMADANQSQLAMSHLNGQKMYGKIIRVTLSKHQT
VQLPREGLDDQGLTKDFANSPLHRFKKPGSKNFLNIFPPSATLHLSNIPSSVSEEDLRTL
FTNTGGTVKAFKFFQDHKMALLQMSTAEEAIQALIDLHNYNLGDNHHLRVSFSKSTI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtctccgatgttgcagttggtgtgaagagaggatcagacgaactacta
tcaggaagtgtgcttaacgggcccaatactaatatgagtagcatcgttgttacggctaat
ggtaatgatagcaagaaatttaaaggagatgataaaatggatgcagcaccttcccgtgtc
ctccacattcggaagttacctggtgaagtaacagagacggaagtaattgctttaggttta
ccttttggcaaagttaccaacatcctcatgctcaagggcaaaaatcaggcttttttggag
atgggtagtgaagaagcagcaatcacaatggttaattactacacaacaatgacaccgagt
cttcgtaaccaacctgtctatatccagtactctaatcataaggagttgaaaacagatggt
ccattaaatcagcgagctcaagctgttcttcaagctgttacatccgtacatacatcgaat
tcctctctagctgggacaacaggcgacatttcagtttcttctggccaaagtccagtttta
agaataattattgacaacatgtactatcctgtcacacttgatgttcttcaccagatattt
tcaaagtttggtgctgtcttgaagattattacctttaccaagaataaccaatttcaagct
ttgctgcagtacggtgatccagtaaatgcacagcaagcaaaattagctttggatggacaa
aatatatataatgcctgctgtaccctgaggattgatttttctaaattggtaaatttaaat
gtgaagtacaacaatgataaaagtagagactacactcgccctgacctaccatctggggat
ggacagccttcattggatcctgctattgctgcagcttttgccaaagaaacgtctctttta
ggtcttccagttacagctgttccaggaactctaagtcccatgggcattcctaatgctgct
gcggcagctcatgctcatgctcatgctgctggtcgtgctggtatgggtggaatgacacct
ggagtctatactgtcctcttggttagcaatctaaatgaagagatggtttcgccccaaagt
ctgtttaccctcttcggtgtttatggggatgtacagcgtgtgaagattttatacaataag
aaagacagtgctctcatacagatggctgatgcgaaccaatcacaacttgctatgagccac
ctaaacggtcaaaaaatgtatgggaagatcattcgagtaactctctccaagcatcagaca
gtgcaacttcctcgagagggtcttgatgaccagggacttacaaaagattttgccaattcc
cctctgcatcgcttcaagaaacctggctcgaaaaatttcctgaatatatttcctccttcc
gctactcttcatctatccaatattccctcttcagtatctgaagaggacttacgtacactt
tttacgaataccggcggcactgtgaaagcattcaaatttttccaagatcacaagatggct
ctacttcagatgtccacagcagaagaagcgattcaggccttgattgatctgcataattac
aaccttggagataaccaccacctgagagtttctttctccaagtcaactatttaa
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