Pleurodeles waltl (Iberian ribbed newt): 138293220
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Entry
138293220 CDS
T10800
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138293220 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwl03021
]
138293220 (GTF2B)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
138293220 (GTF2B)
Prokaryotic type
Archaeal type
TFB
138293220 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
Sigma70_r4
BRF2-like_C_cyclin_rpt
RB_B
KIF9
Motif
Other DBs
NCBI-GeneID:
138293220
NCBI-ProteinID:
XP_069088410
LinkDB
All DBs
Position
4_2:complement(709640974..709821156)
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AA seq
316 aa
AA seq
DB search
MASTSRVDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
AKDPSRVGDTQNPLLSGGDLTTMIGKGTGSASYDEFGNSKYQNRRTMSSSDRAIMNAFKE
ITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaagccgagtggatgcccttcctagagtgacatgtccaaaccatccggat
gccattttggtggaagattacagagctggggacatgatttgtcctgagtgtgggctagta
gtaggtgaccgggttattgatgtgggttcagaatggagaactttcagcaacgacaaagct
gccaaagacccttctcgagtgggagacacccagaatcctcttttgagtggtggtgatttg
acaacaatgattggcaagggtactggttcggcaagttatgatgaatttggaaattcaaag
taccagaaccgcagaacaatgagtagttcggaccgtgctataatgaatgctttcaaggaa
attactactatggccgaccgaattaacctccctcgtaacataattgatcggactaataac
ttattcaagcaagtgtatgagcagaaaagcctgaagggaagaagtaacgacgcaattgca
tcggcatgcctttatattgcctgtaggcaagagggtgttccaagaacgtttaaggaaatt
tgtgcggtgtctagaatttcaaagaaagaaattggacggtgctttaagcttattctaaag
gcgctggaaactagtgtggatttaattacaacaggggacttcatgtcaagattctgttcg
aacttaggccttcctaagcaagtacagatggcagctactcacatcgcacgtaaagctgtg
gaactggacctagttcctggaaggagccccatttctgtggcagcagcagccatttatatg
gcttcacaagcatcggcagagaaaaggactcaaaaagaaattggagacattgctggtgtc
gctgatgttaccattcgacaatcatacagactcatctacccacgagccccagacctcttc
cctgcagacttcaaatttgataccccagttgacaaactaccacaactgtaa
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