Pleurodeles waltl (Iberian ribbed newt): 138293225
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Entry
138293225 CDS
T10800
Symbol
LRRC8C
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138293225 (LRRC8C)
Ion channels [BR:
pwl04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
138293225 (LRRC8C)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_5
LRR_LRWD1
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
138293225
NCBI-ProteinID:
XP_069088424
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Position
4_2:711378713..711547198
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AA seq
802 aa
AA seq
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MIPVTEFRQFSEQQPAFRVLKPWWDVFTDYLSVAMLMIGVFGCTLQVMQDKIICLPKRVH
PAQNHTSVVNSSSAISSAAQLPQVKPSTTPATVEMRGLKTDLDLQQYSFINQMCYERALH
WYAKYFPYLVLIHTLVFMLCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGE
DPEEKDNRKNNLSKANANLSMVEGTLVKTQSLKSIPEKFVVDKATAGALDKKEGEQAKAL
FEKVKKFRLHVEEGDLLYAMYVRQTILKVIKFLIIIGYNSALVSEVQFTVDCNVDIQDMT
GYKHFSCNHTMAHLFSKLSFCYLCFVSVYGLTCLYTLYWLFYRSLKEYSFEYVRQESGID
DIPDVKNDFAFMFHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNNEWTPEKLRQRLQTN
SNNRLEMQLFMLSGLPDTVFEITELQSLKLEIINNVMIPATIAQLDNLQELSLYQCSVKI
HTAALAFLKENLKILRVKFDDIRELPPWMYGLRNLEELYLIGSLSPDISKNITLESFREL
KSLKILYIKSNLSKVPQPIVDVSSHLQKLSIHNDGTKLVMLNNLKKMVNLTELELVHCDL
ERIPHAVFSLLTLQELDLKENNLKSIEEILSFQHLRKLTILKLWYNSITYIPEHIKKLSC
LERLYFSHNKIEVLPSHLFLCNKLRYLDLSYNDIRFIPPEIGVLQSLQYFSIACNKVESV
PDELYFCKKLKTLKLGKNNLCSLSPKISNLVFLSYLDIKGNHFETLPPELGVCKALKRNG
LIVEDTLFETLPCEVREYMKTE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtaactgaatttcgtcagttttcagaacagcagcctgctttccgtgtgttg
aaaccatggtgggacgtgtttacagattatttatctgtagcaatgttgatgattggtgtc
tttggatgcacattacaggttatgcaggacaagataatttgtcttccaaaaagagtacac
cctgcgcaaaaccacacatctgttgtcaattcttcaagtgccatttccagtgccgcacag
ctgccacaagtgaagccatccaccacacctgccactgtggaaatgcgggggctgaagact
gacctcgacctgcagcagtacagctttataaatcaaatgtgttatgagcgtgccctgcat
tggtacgcaaaatatttcccctatcttgtccttatccatacactggttttcatgctttgc
agtaatttctggttcaaattcccaggatcaagctccaaaattgagcacttcatttcaata
ctggggaaatgttttgactctccgtggaccacaagagctttatctgaggtatctggtgag
gacccggaagaaaaagacaacaggaagaacaatttaagcaaagccaatgcaaacttatct
atggtcgaaggcacgttggtgaagacccagtcattaaaatcaatacctgagaagtttgtg
gttgataaggcaacagctggtgctctggataagaaggagggagagcaagcaaaggcgtta
tttgagaaggtgaaaaaattcagacttcatgtcgaagaaggggatctgctatatgccatg
tatgttcgacaaactatacttaaagttataaaatttctcatcattattggatacaacagt
gcactagtttcagaggttcagtttacagtggactgcaatgttgatatacaagatatgact
ggatataaacatttttcctgcaatcataccatggcacatttgttttccaaactttccttc
tgctatttatgctttgtgagtgtatatggcttaacatgcctttataccttatactggctc
ttctatcgctctctaaaagaatattcctttgaatatgttcgccaagagtcaggaattgat
gatattccagatgtcaaaaatgactttgccttcatgtttcacatgattgatcagtatgat
cccttgtattccaaacgatttgcagtattcttgtcagaggtaagtgaaaacaagttgaag
cagttgaatctaaacaatgaatggacacctgaaaagctgagacagagactacagacaaat
tccaacaaccgccttgagatgcagctattcatgctatctgggcttccagacacagttttt
gaaattacagaacttcaatctttaaagcttgaaatcattaataatgttatgataccagcc
acaatcgctcaacttgacaatttacaggaactctctttgtaccagtgctctgtaaaaatc
cacactgcagctttggcattcctgaaagaaaacctgaagatcttaagagtcaagtttgat
gacataagagaacttcctccttggatgtatgggctaagaaatttagaagagctgtacctt
attggctcattaagtccagatatttcaaaaaacattacacttgagtcttttcgagagctg
aaaagcctgaaaattttgtatatcaaaagcaacttatcaaaagtaccccaacccattgtt
gatgtttccagtcacctacaaaagctttcgatacataatgatggcaccaaattagtgatg
ctgaacaacctgaagaaaatggtaaacctaactgagctagaactagttcactgtgatttg
gagcgcatacctcatgctgtcttcagtctacttactctccaggaactagatttgaaagaa
aataatctcaaatcaattgaagaaatactaagttttcaacatttgcgaaaactaaccatc
ctgaagttgtggtacaatagcataacctacatccccgaacacattaaaaaactgagctgc
ttggaacgattatattttagtcacaacaaaatagaagttcttccctctcacctgttccta
tgcaacaaactaagatacctggatttgtcttataacgacattagattcattccaccggaa
ataggcgtgctacaaagtttgcagtatttttccattgcgtgcaacaaagtggaaagtgtg
ccagatgaactctatttttgtaagaaattgaaaactttgaaactaggaaaaaataacctg
tgctcactgtcacccaaaatcagtaacttggtattcctttcctacttggacattaaaggt
aatcattttgaaactcttcctcctgaacttggagtctgcaaagctctgaagcgaaatgga
ctgatagtggaggacactttgtttgaaaccttgccatgtgaagtccgtgaatacatgaaa
actgagtag
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