Pleurodeles waltl (Iberian ribbed newt): 138293514
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Entry
138293514 CDS
T10800
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138293514 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwl03400
]
138293514 (RAD54L)
DNA repair and recombination proteins [BR:
pwl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
138293514 (RAD54L)
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
138293514
NCBI-ProteinID:
XP_069088859
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Position
4_2:complement(946452906..946565467)
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AA seq
744 aa
AA seq
DB search
MRRSLAPSQLAKRKQGSSSDDEDWHPDDAPKRRKPGTHSGVQSWESFISPFRKPLAPLTN
QPICLDSSKHEAFIRSILSKPFKVPIPNYKGALGLRALGIKKAGVRRALHDPFEDGALVL
YEPPPLSAHDLLKVDKEKLPVHVVVDPVLCRILRPHQREGVKFLWECVTGRRIPGSHGCI
MADEMGLGKTLQCISLMWTLLRQSPDAKPEIEKAVVVSPSSLVRNWYNEVGKWLGGRIEP
LAIDGGSKDEIDRKLVGFMNQHGTRVPSPILIISYETFRLHAEVLHKGSVGLVICDEGHR
LKNSENQTYQALNCLNTTRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIP
ILKGRDADASPSDRLKGEEKLKELISVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
TELYRRFLKQATPAEELNEGKISVSSLSSITSLKKLCNHPGLIYEKCVEEEEGFEGAVNL
FPPGYSTKSVEPQLSGKMLVLDYILALTRSSSNDKVVLVSNYTQTLDLFEKLCRTRRYLY
VRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQTHKKALSSCVVDEEQDVERHFSIGE
LKELFTLNEATTSDTHDKFKCRRCVNGHQVRPPAEGSDCTSDLSQWNHCADKRGLQDSAL
YSAWDAAISFVFHHRSHEEQRGVL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtctggcgcccagccagttggcgaagaggaagcaaggaagttcttctgat
gatgaagactggcaccccgatgatgctccaaagaggcgtaaacctggtactcactctggg
gtgcagagctgggaaagtttcatatcacctttccgaaaacccctggccccactgaccaat
caacccatttgtctggatagcagcaaacatgaagcatttatccgaagtattttgtcgaag
cctttcaaggttcctattcctaattataaaggagccctgggattacgggcattgggtatc
aaaaaggctggtgtcaggcgggcactgcatgacccctttgaagacggggcgctagttctt
tatgagcctccccctctcagcgcccatgacctgctcaaagttgacaaggagaagctgcca
gtccatgttgtggttgatcccgtactgtgtcgaattttacgcccacatcaaagagaagga
gttaagtttctttgggagtgtgtaacgggcagaaggatccctggtagccatggttgcatc
atggctgacgagatgggtttaggaaagaccctgcagtgcatctcactcatgtggacctta
ctacgccagagtccagatgcaaaacctgaaattgagaaggctgttgtggtgtcaccatct
agcctggttagaaactggtataacgaagttggaaaatggttaggaggaagaatagagccc
ctggcaatcgatgggggatcaaaggatgagattgatcgcaaattagttggatttatgaac
caacatggaacaagagtaccatctcccatcctgataatttcttatgagactttccgtctt
catgccgaggtgctgcacaagggaagtgtcgggctggtcatctgtgatgagggacatcgg
ctgaaaaactctgaaaatcagacataccaggcacttaactgcttgaatactactcgccgt
gtgctcatttctgggacacctattcagaatgatcttcttgagtattttagccttgtgcac
tttgtcaatgcaggcattcttgggacagcccaagagtttaaaaaacgctttgagattcct
atcctaaaaggaagagatgctgatgcgagtcccagtgatcgattaaagggagaagaaaaa
ctgaaggaattaattagtgtagttaacagatgtctgattcggcgaacatcggatattctc
tctaaatacttacctgtgaaaattgagcaggtggtgtgttgcaggctcacccctctgcag
accgagctgtacaggcggtttttgaaacaagccacgccagcggaagagctcaacgagggg
aagataagcgtgtcttcattgtcatccataacatcactgaaaaagctttgcaaccaccca
ggtctcatatatgagaagtgtgttgaggaggaggaaggatttgaaggagcagtgaattta
tttccacccggatacagcaccaaatctgtggagccacaactctcagggaagatgttggtt
ttggattacattctggcacttaccagaagcagcagtaatgataaagttgtactggtatcg
aactatacccagacgttggacctgtttgagaaactctgtaggacaaggaggtacctttat
gtccgattggatggcaccatgtccattaagaagagagcaaagatagttgagcgtttcaac
agtccgtctagcccagaatttattttcatgttgagcagtaaggcaggaggatgtggcttg
aacttgattggtgccaacaggcttgtgatgtttgacccagattggaatccagcaaacgat
gagcaggcaatggctcgtgtatggcgtgatgggcagaagaagacctgttacatttaccga
ctgctttcgactgggaccattgaggagaagatactccagaggcagacacacaagaaggca
ctgagcagctgtgtagtagatgaggagcaggatgttgagcgccacttctccatcggggaa
ctgaaagagctattcacgctgaatgaggccacaacaagtgacacccatgacaagtttaag
tgtcgccgatgtgtcaatggccaccaggtgaggccccctgcagagggctcggactgcaca
tctgacctctcacagtggaaccactgtgctgataagcgcggcctgcaggattccgctcta
tactcagcctgggatgctgccatcagctttgtattccatcatcggtcgcacgaggagcag
cgcggagttctctga
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