Pleurodeles waltl (Iberian ribbed newt): 138293560
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Entry
138293560 CDS
T10800
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138293560 (PTCH2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
138293560
NCBI-ProteinID:
XP_069088924
LinkDB
All DBs
Position
4_2:981999227..982073610
Genome browser
AA seq
1429 aa
AA seq
DB search
MASDLRAPPAPPGGFGGQPPGYSAPAPPTVNPDLQRRPSYCHAAYALKQISKGKAVGQKA
PLWLRARFQALLFSLGCRIQRHCGKVLFIGLLVFGAMAVGLRVASIETDIEQLWVEAGSR
VSHELRYTKEKLGEEAVYTSQMMIQTPRVAGENVLSQSALLMHLKAALAASKVQVSLYGK
SWDLNKLCYKSGVPIIENTMVERMIEKLFPCLIVTPLDCFWEGALLQGGSAYLPGRPEIQ
WKNLNPMQLMEELGQFTSVDGFKEMLDKADVGQAYMERPCLDPADPQCPESAPNKQKRRV
PNIAQELAGGCYGFSKRFMHWQEELILGGTVKDSQDRLLSAEALQTMFLLMSSRQLYEHF
RDNYEIHDINWNEEKAAAILETWQRKFVELAQQSAPENSSQSIHAFSTTTLNDIMKSFSD
ISVIRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFN
AATTQVLPFLALGIGVDDMFLLAHAFTETGLSTPFKERTGECLRRTGTSVTLTSVNNMIA
FFMAALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLQRREDKRLDILCCFYSPC
SNRVIQIQPQEYADANDNCTYHASSYGGPTITTSTHITTTVQAFTQCDPSGQHIVTILPP
TSQIRTSPSVIVDPLGSQVFTPSSSTRDLLAQVDETKAGRECVPLPFVKWNLSDFAREKY
APLLLKTQTKGIVVVLFMALLGLSLYGTTMVHDGLYLTDIVPRDTKEYGFIAAQFKYFSF
YNMFIVTKGGFDYPRLQKPLHELHQSFSSIKFVVRGEDRALPKMWLQYFQDWLRDLQAKF
DQDWEAGRITRDSYRNGTENGVLAYKLLIQTGDKKVPFDYNQLTTRRLLDENGLIHPDTF
YIFLTVWVSNDPLGYAASQANFYPQPPEWIHDKYDTTGENLRIPAAEPLEFAQFPFYLNG
LRQTSDFIEAIESVRALCEEFAAQGVISYPNGYPFLFWEQYIGLRHWFLLAISIVLACTF
LVCAILLLNPWTAGIIVFVLAMMTVELFGIMGLIGIKLSAIPVVILIASVGIGVEFTVHV
ALGFLTAIGNRNLRSALALEHMFAPVMDGAISTLLGVLMLAGSEFDFILRYFFAVLTILT
ILGLLNGLVLLPVLLSVIGPPAEMVPADNSNHLPPPSPEPIPPPLNHHGLYMQRPPARHS
SFMDSDSEYYSETTTTATSGVGDEDLHLYEQRSPYIIPPPPSHILLENSKDPSFPKITVV
KSCNENEDLTPKKDPLTQQQPQPKVNTFASQIVCQDLKHFQQLELGERRPQPPSHRLHRP
GRPHIVGSRTQPRALPSHTAHNHPRTALPAYSTTVTATASVTVAVHPRLPGSVLGYAHEG
FEDTEADSCRDSSHPPNMTHKNRRKHQLEELELQDLEQDRRAEDTSARH
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggatctccgggccccccctgcgcccccaggagggtttggggggcagcccccc
gggtacagcgcccctgcaccgccgactgtcaacccggacctgcagaggagacccagctac
tgccacgctgcctatgctctgaagcagatctccaaggggaaagcagtgggtcagaaggcc
cctctctggctccgggcccgcttccaggcgctgctcttctccctgggctgccggattcag
cgacactgtggaaaggtgctcttcatcggtttactagtcttcggcgctatggccgttggg
ctgcgggtggcatccatcgaaacggacatcgagcagctctgggtggaagcgggcagccgg
gtcagccacgagctgcgctacaccaaggaaaagctgggcgaggaggccgtgtacacgtcg
cagatgatgatccagacgcctcgggttgctggcgagaatgtcctgagccaaagtgccctc
ctgatgcacctcaaggcagccctggccgccagcaaggtgcaggtgtctctctacggaaag
tcttgggatttgaacaagctctgctacaagtctggagttcccatcatcgagaacacaatg
gttgagcggatgattgaaaagctttttccgtgcctcatcgtcactcctctggactgtttc
tgggaaggtgccctgctgcagggcggctctgcctacctccctgggaggcccgaaatccag
tggaaaaacctaaatcccatgcagctgatggaagagcttgggcagttcacctccgtcgat
ggcttcaaggagatgctggacaaggcggacgtgggccaggcatacatggagcggccgtgc
ctcgaccccgcggacccccagtgcccagagagcgcgcccaacaagcagaagagacgggtt
cccaacatcgcccaggagctggctgggggctgctacggcttctccaaaaggttcatgcac
tggcaggaggagctgatcctggggggcaccgtgaaggactcccaggacaggctgctgagc
gccgaagctctccagacgatgttcctgctcatgagctcgcgacagctgtatgagcatttc
agggataactacgagatccatgacatcaactggaacgaagagaaggcggcggccatcttg
gaaacatggcagaggaagtttgtcgagctggctcagcagtctgctccggaaaactcctcg
cagagcatccacgccttctccaccaccaccctcaatgacatcatgaagtctttctccgac
atcagcgtgatccgggtagctggcgggtacctcctgatgcttgcctacgcctgtgtgacc
atgctgcgctgggattgctccaagtcacagggggctgtggggctggccggtgtgctgctc
gttgccctgtcggtggcatctggcctcgggctctgctccttgctgggcatctctttcaac
gcggccaccacccaggtgctgccctttctggctcttggcattggggtggatgacatgttt
cttctggcgcatgccttcacggaaacaggcctgagcacccccttcaaggagaggacgggc
gagtgtcttcgacgcacggggaccagcgtcaccctgacctccgtcaacaatatgattgcg
ttcttcatggcagcgctggtgcccatccctgctctgagggcgttctcactccaggcggcc
atcgtagtggtcttcaactttgccatggtgctgctcatcttcccggccatcctgagcttg
gaccttcagcggcgcgaggacaagaggctggacatcctctgctgcttctacagcccttgc
tccaatcgtgttattcagatccagccacaggagtatgcggacgccaatgacaactgcaca
taccacgcttcatcctatggtgggcccaccatcaccaccagtacccacatcaccaccacg
gtgcaggccttcacacagtgtgacccctcaggccagcacattgtcaccattctgccgccc
acctcgcagatccgtacctcaccctctgtcattgtggaccccctgggatcccaagtcttt
accccttccagctccacacgagaccttcttgcgcaggtggatgagacaaaggcggggcga
gagtgtgtaccgctgccctttgtaaagtggaacctgtcggattttgctcgtgagaagtac
gcccctctgctgctgaagacgcagaccaaaggtatcgtggtcgtactcttcatggctctc
ctgggtctgagcctgtatggcaccaccatggtccatgacgggctctacctgacagacata
gtgccccgtgacaccaaggaatatggcttcatcgcggcccagttcaagtacttctccttc
tacaacatgttcatcgtcaccaagggcggctttgactaccccaggttgcagaagccgctg
cacgaactgcaccagagcttcagctccatcaaatttgtggtgcgaggcgaggacagggcc
ttgccaaagatgtggctgcagtacttccaggactggctcagagatctgcaagccaagttt
gatcaagactgggaagcgggacgcatcacccgtgacagctaccgcaatggcacagaaaat
ggggtccttgcctacaagctgctgatccagacaggtgacaagaaggtccccttcgactac
aaccagcttaccacacgtcgcctgttagatgagaatggtctcattcatccagacactttc
tacatcttcctgacagtgtgggtgagcaacgaccctttggggtacgctgcctctcaggcc
aacttctaccctcagccaccggaatggatccatgacaagtatgacactacgggcgagaac
ttaagaattcctgctgcggaacctctggagtttgcccagttcccattctacctcaatggc
ctacgccagacctctgacttcattgaagccatcgagagtgtccgtgctctctgcgaggag
tttgctgcccagggcgtcatcagttaccccaacggctaccccttcctgttttgggagcag
tatatcggtctgcgccattggttcctcttggccatcagcattgttttggcttgcaccttc
ctggtctgtgccatcttgctgctcaatccctggacggcaggcatcattgtttttgtcttg
gccatgatgacagtggagctctttggaatcatggggctgatcggcatcaagctcagcgcc
atccctgtggtgatcctcattgcctctgtgggcatcggagtagagttcactgtccatgtg
gctctgggctttcttacggccattggcaacaggaacctgcgatcagccctggcactcgag
cacatgtttgcgccagtgatggatggtgccatttccaccctcctgggagtgcttatgctg
gccggctctgaatttgacttcatcttgaggtacttctttgcagtcctgacaattctaacc
atactgggtctcctgaacgggctggttctgctgccggtcctgctgtctgttatcgggccc
cctgcagagatggttccagcagacaatagcaaccacttacctccaccgtcgccagaaccg
atcccgccacctctcaatcaccatggcttgtatatgcaacggcctcctgcccgacacagc
tctttcatggactcagactccgagtactactcggaaaccaccaccactgccacctccggg
gttggagacgaggacctgcacttgtatgaacagcgcagcccctacatcattccaccaccc
ccttcgcacatcctgctggaaaacagcaaggaccccagctttccgaaaatcaccgttgtg
aaatcttgcaatgaaaatgaggacctgacgcccaagaaggaccctctgacacagcagcaa
cctcagcccaaggtgaacacgtttgcatcgcagatcgtctgccaggacctaaaacatttt
cagcagctggagctcggcgagaggaggccgcagccccctagccacagactgcacaggccc
ggcaggcctcacattgtgggttctaggactcaaccgcgggccctgcccagccacactgct
cacaaccacccccggactgcactgccagcctacagcaccacagtgaccgccaccgcctcg
gtcacagtggccgtgcaccccagactgccggggtcagtcctggggtacgcccatgagggc
tttgaggacactgaggcagactcttgtagggactcttctcacccacccaacatgactcac
aagaacaggaggaagcaccagctggaagagttggagctgcaggacctggaacaagacagg
agagcggaagacacttctgcaaggcactag
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