Pleurodeles waltl (Iberian ribbed newt): 138293619
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Entry
138293619 CDS
T10800
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138293619 (RNF20)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138293619 (RNF20)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
138293619 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
Docking
zf-RING_5
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
138293619
NCBI-ProteinID:
XP_069088997
LinkDB
All DBs
Position
4_2:complement(1026058823..1026166688)
Genome browser
AA seq
964 aa
AA seq
DB search
MSGIGSKRSSSDGGTSGPPEKKAAVEDSGTKVETIKLGGVSSTEELDIRTLQTKNRKLAD
MLDQRQAIEDELREHIEKLERRQATDDASLLLVNRYWSQFDENIKIILKRYDMEQGLADL
LSEGKKTLVVPEPEPDSDSNQERKDERVEGHLEPAFSFLATLASSSSEEIETQLQERVES
SRRAVAQIVAVYDKMQARVETLSLNLNSKEPGVEELTVKELNALLMHENGRLQELTDLLQ
EKHNGMKQEFSNLQEKVETAESRVSVLETMIEDLQWDIDKIRKREQRLNRHLAEVLERVN
SKGYKVYGAGSSVYGGTITINARKFEEMSVELEENKELAENRLTELEKLRQDLEEVTSHN
DGLKAELRMAVDEVVKESPEYRCMQSQFSVLYNESLQLKTQLDEARTLLHATRLTHQRQV
DLIERDEVTLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQGDLNKIRLRNSSQFLQSQSSTEDVKEEALEIKADP
DEPFTAPGAAAKPSDDVPEVKVKEEDRDRDKREKEREKEREKHREKQKEPDKERESSSKE
KSKHEDGKRREADVIKQLKADLKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSK
AELEELRQRLRELEDKEKKESKKMADEDALRKIRAVEEQIEHLQKKLAIAKQEEEALLSE
MDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTL
KTQVDAQLQVVRKLEEKEHLLQSNINAGEKELGHRTQALEMNKRKATEATQQADDLKAQL
EIQQKKLRSIREEISENSVSKEKDTFNYKRAQEDISRLRRKLETTKKPDTGPKCDEILME
EIKEYKARLTCPCCNMRKMDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHR
IYIG
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggattggtagcaagcggtccagcagcgatgggggcacctctggtccccccgaa
aagaaagcagcggtcgaggactccggtaccaaagtggaaactatcaaacttggtggagtc
tcatccacggaagaactggacatccgcactttgcaaaccaagaaccggaagttggccgac
atgctggatcagcgtcaggcaattgaggatgagttgcgtgagcacattgagaaactggag
aggcgccaggctacggacgatgcttcacttctgcttgtgaatcgctactggagtcagttt
gacgagaacattaagatcatcctgaagcggtatgacatggagcagggactggctgacctg
ctgtctgagggcaagaagacccttgtggtgcctgagcctgagccagactcggacagcaac
caggagcgaaaagatgagcgagtcgagggacacctggaaccagcattctccttcttggcc
acgctcgcaagcagcagcagtgaggagattgaaacgcagctgcaagagcgtgtggagtcc
tctcgtcgggctgtggcacagattgtagctgtgtatgacaaaatgcaggccagggtagag
accctgtctctcaaccttaacagcaaagagcccggcgtggaggagctgactgtgaaggag
ttgaatgcgctcctgatgcatgagaacggccgtctgcaggagctgacagaccttctgcag
gagaagcacaatggaatgaagcaggagttctctaacctgcaggagaaggtggaaactgca
gagtcccgcgtgtccgtgctggaaaccatgattgaagatcttcagtgggacattgacaag
atccgaaagagggaacagagactcaatcgccacttggcggaagtgctggagagggtaaat
tccaaaggttacaaggtttacggagcagggagcagtgtgtacggtgggaccattactatc
aatgctcgaaagtttgaggagatgtcagtggagctcgaggagaacaaagagctggcagaa
aaccgcctcactgagctggagaagttgcggcaagatctggaggaggtgacctcacataac
gatgggctaaaggcagagctacggatggctgtagacgaggtggtgaaggagtctcctgaa
taccgctgcatgcagtctcagttttctgtcctgtacaacgagagcttgcagctcaagact
cagctggatgaagcacgcacactcctgcatgccactcgactcacccaccagcgccaggtc
gatctcatagagagggatgaggtcaccttgcaaaaaaagctacgcactgaagtgatacag
ctggaggacaccctagcccaggtgcgcaaagagtacgagatgctgcggattgaattcgag
cagacacttgctgccaatgagcaagccggtccaataaacagggagatgcgacacctgata
agcagcctccagaatcacaatcaccagctgaagggagaggtgctgagatacaagaggaaa
ctgagagaggcccagggggatttaaacaagatccgtctgcgcaacagcagtcagtttctg
cagtctcagtccagtacggaagatgtgaaggaggaagcacttgagatcaaggcggatccc
gatgagcccttcacagcccctggggcagcagccaaaccttctgatgatgtccctgaggtg
aaagtgaaggaggaggaccgtgatcgggacaagcgggagaaagagcgggagaaggagcgg
gagaagcaccgcgaaaagcaaaaagagccagataaggagagggagtcgtcctcgaaagag
aagagcaaacatgaggacgggaagaggcgggaggctgatgtcatcaagcagctgaaagca
gaccttaagaaagctcaggaaagtcagaaggagatgaagcttcttctggacatgtaccgc
tcagctcccaaggagcagagagacaaagttcaactcatggcggctgagaagaaatccaaa
gctgagcttgaagagctgaggcagagactgagggagctggaagacaaagagaagaaggaa
agcaagaagatggctgatgaggatgcactgcgcaaaatccgggcggtggaagagcagatt
gagcacttgcagaagaaactggccatcgccaagcaggaggaggaggcactgctctcagaa
atggatgtcacaggacaagccttcgaggacatgcaggagcaaaacatccgccttatgcaa
cagctgcgcgagaaggatgatgccaactttaaactgatgtctgagcgcattaagtccaac
cagatccacaagcttcttaaagaagaaaaggaagagctggccgatcagcttcttacactc
aaaacacaggtggatgctcagttacaggtggtgcggaagctggaagagaaagagcacctg
ctgcaaagcaacattaacgctggggagaaagagctggggcaccgcacacaagccctggag
atgaacaagaggaaggcaacggaggccactcagcaggcagatgacctgaaggctcagtta
gaaatccagcagaagaagcttcgaagtatccgtgaagagattagtgagaacagtgtctca
aaggagaaggacaccttcaactacaagcgagcacaggaggatatctcgcgtctgcggcgg
aagcttgagaccaccaagaagccagacacaggaccaaaatgtgacgagattttgatggag
gagatcaaagaatacaaggcacgcctaacctgtccttgctgcaacatgcgcaagatggat
gctgtcctgaccaagtgtttccatgtcttctgcttcgagtgtgtgaagacgcgctacgac
acccgccagcgcaaatgccccaagtgcaatgccgcctttggagccaacgacttccaccgc
atctacattggctga
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