Pleurodeles waltl (Iberian ribbed newt): 138293912
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Entry
138293912 CDS
T10800
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04010
MAPK signaling pathway
pwl04020
Calcium signaling pathway
Brite
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
138293912 (CACNA1E)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
138293912
NCBI-ProteinID:
XP_069089299
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All DBs
Position
4_2:complement(543795975..545175168)
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AA seq
2344 aa
AA seq
DB search
MARFGETVVGRPSSADGSSERSKSLPTVAPATATGSQAAFKQSKAQRARTMALYNPIPVR
QNCFTVNRSLFILGEDNALRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTP
MSRRLEKTEPYFIGIFCFEASIKVVALGFVFHKGSYLRNGWNIMDFIVVMSGILATAGTH
FNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHRACYTNNTGEYEELDPPQPCGVPQCPPGYECVKWIGPNDGITQFDNILFAV
LTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE
RVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNAGTSALEVLRRATIKRSR
PEVVNRDSSDDHCADISSVGTPLARASIKSAKVDGASYFRHKERLLRISVRHMVKSQVFY
WLVLCVVALNTGCVAIVHHNQSLLLSSCLYYAEFLFLGLFLLEMAFKMYGMGPRLYFHSS
FNCFDCGVTVGSIFEVVWAFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNS
MKSIISLLFLLFLFIVVFALLGMQLYGGRFNFRDGTPSANFDTFPAAIMTVFQILTGEDW
NEVMYNGIRSQGGVRSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKEEQEE
EEAFQEKHAQQKAKEVSPMSATNAAGMEKDRRKRHTMSVWEQRTSQLRRHMQMNSQEAIE
SEEPAGLNPQSSLYRKTHVLHGPVTEKGEGPVLKEDLPTEKASDDPLNIHPSLSTSEGLG
SPSIRTKKEHWRHKSYHGNCEGREQEGTTVEEVVRRRQSQRRSRHRKAREGREVSGGTSD
STSASRERGLDEVSPAEGVQEGLERRNEEKPGMVQEQGEQDGPLSRKPEWPVPSSGCAGA
STEIKLLEMPQLQEMDETQNGCCSTNDMDSSKQALLSRLHTESGNGNPEKRLTDATSSTA
ITEGSTESTSVIINIGREGVPADSTVVQSAGHDSKSCSLSAKNNKEAICDHETKVAISEL
IKLKIRPRLKSMARLSRLRVMNHSGSRGHSHDQSSTKSVSEKMDGEASPLKERLTKEEEE
EEDEGDARVMKIKEKGLESPKAIVPYSSMFIFSSTNPLRKVCHYIVNLRYFEMSILLVIA
ASSIALAAEDPVLTNSERNRVLRYFDYVFTGVFTFEMVIKMIDQGLVLHEGSYFRDLWNL
LDFVVVVGALIAFALANVLGTSKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVT
SLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCIGSYVDHEKSRLEVK
RREWKRHDFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYV
VYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNR
HTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPYTYELALKYLNIAFTMLFSLE
CILKIIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSSFNMSFLKLFRAARLI
KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDENSHINRHN
NFRTFLSSLMLLFRSATGEAWQEIMLSCLGDKGCEPDTTAPSGPTSNDRCGTDLAYVYFV
SFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWAEYDRAACGRISYKEM
YTVVRVISPPLGLGENCPYRVACKRLVLMNMPVTEDMTVHFTSTLMALIRTALDIKIAKG
GADRQQLDVELQKDILAIWPHLSQKMLDLLVPMPRASDLTVGKIYAAMMIMDYYKQSKVK
KLRQQLEEQKNAPMFQRMEASSLPQEIISNAKALPYHQQDTLSGLSGFPSLSPLTPQELF
QPACLDRRPGPFQEKLSLEPEVREFHRTQPSNCGNYLPVDTQERTASLRASSMPRLAVDP
QVLTEASAMRRSFSTTGGKRPHTSWLDELSMERCNEHSYKSRRRSYHASLRMSGHRLNAD
SGHRSDTHRSGGRERGRSKERKHLLSPDVSRCNSEERSPQPNSEMRERRQSRSPSEGRPH
TPYMQGVSSLSESSIPSDTSTPRRGRRQLPPVPPKPRPLISYASMVRRPGNTSPTLSGNE
DGSPLPDKVLDLDDTGLTGSTSSLQGKVSRHSTPSHYISEPYLALHDELQGSDCGGEEEE
TLTFEAAVATSLGRANTIGSANPMRHGWHLPNGHYRRRRRGGATQMISGAGCGVLSDTDE
DDKC
NT seq
7035 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagagacggtggtcggccggccgagctccgcggacgggagctcggag
aggagcaagagcctgcccacggtggccccggcgacggccacgggctcgcaggccgccttc
aagcagtccaaggcgcagcgagcgcgcaccatggcgctctacaaccctatcccggtccgg
cagaactgcttcacagtcaacaggtcccttttcatcctgggcgaggacaacgcgctgcgc
aagtacgcaaagaagctcatcgactggcctccctttgagtacatgattctggctaccatc
atcgcaaactgcatcgtcctggccctggagcagcacctaccagaagacgacaagaccccc
atgtcccggagactggagaaaaccgagccctacttcattggaatcttctgctttgaggct
agtatcaaggtggtggccttggggtttgtgttccacaaaggatcctaccttcggaacggt
tggaatataatggactttattgtggtgatgagcggtatcctggccactgctggaactcac
ttcaacactcatgtggacttgcgcaccctgcgcgccgtgcgagtactgcggccattgaag
cttgtctctgggattcctagtttacagatagtgctaaagtccatcatgaaagccatggtg
cctcttctgcagattggtctactgctcttctttgccattctaatgttcgccattataggt
ctggagttctacagcggcaaactgcacagggcctgctacaccaataacacaggtgagtat
gaagagttagacccgcctcagccgtgtggagtgccacagtgccctcctgggtacgaatgt
gttaaatggattggccccaacgatggcatcacccagtttgacaacatcctcttcgctgtc
ctcacggtcttccagtgtattaccatggagggatggaccaccgtactgtacaataccaat
gatgccttaggagccacatggaactggctttacttcattcctctcatcatcatcggatcc
tttttcgtactcaatcttgttctgggagtgctgtctggagaatttgccaaagaaagagaa
agagtggagaaccgccgagctttcatgaaactgcggagacagcagcaaattgagagggag
cttaatggatacagggcctggattgacaaagcagaggaagtgatgctggcagaagaaaat
aagaacgcaggtacttcagccttggaagtgctcagacgtgcaacaataaaaagaagcagg
ccagaagtagtgaacagagattccagtgatgatcactgtgcagatatctcctctgttggc
acgcctctagctcgtgccagcatcaagagtgccaaagtggatggagcctcctacttcaga
cacaaagagcggctactacgcatttccgtccgccacatggtcaaatctcaagtgttctac
tggctggtcctctgtgtggtggccctcaacacgggctgtgtggccattgtacatcacaac
cagtcgttgctgctctccagctgtctttactatgcagagttcttgttcctggggcttttt
ctcttggagatggcctttaagatgtatggaatgggccctcgtctctacttccactcttct
ttcaactgcttcgactgtggggtcaccgtgggaagtatctttgaagtggtctgggccttt
ttcagacctgggacttcctttgggatcagtgtcctgcgagcccttcgacttctaagaata
ttcaagataacaaagtactgggcctccctgaggaatctggtggtgtccttgatgaattca
atgaagtccatcatcagtctgctttttctccttttcctcttcattgtagtatttgccctc
ctggggatgcagctatacgggggcaggtttaacttcagagatgggactccctctgccaac
tttgacacttttcctgcagccattatgacggtgttccagattctgaccggggaggattgg
aatgaggtgatgtacaatgggatccgctctcagggtggagttcggtctggcatgtggtct
tctatctactttattgtactcaccttgtttggaaactacacactgctgaacgttttcctt
gccatcgctgtggataaccttgccaatgcacaagaattaacaaaggaggagcaggaggaa
gaagaagcatttcaagagaagcatgctcaacagaaggccaaggaagtcagcccgatgtca
gccacaaatgctgcaggaatggagaaagatcgacgaaagagacacacaatgtctgtttgg
gaacagcgcaccagccagctgcgccgccacatgcagatgaacagccaggaggccatagag
agtgaggagccagctggcctgaacccacagtccagcctttaccggaagactcatgttcta
catggccctgttactgagaagggtgaagggccggtgctgaaggaagatttgccaacagag
aaggcctcagatgaccccttaaacatccatcccagtctgagcacctctgaaggcctgggg
agtccctcaatcagaaccaagaaagagcactggcgccacaaatcctatcatgggaactgt
gaaggccgagagcaagaaggcacaacagttgaagaagttgtacgacgtagacagagccaa
agacgtagtcgtcatcgaaaagcgagagaaggccgagaggtctctggcggtacctcagat
agcacctcagctagtcgagaaagaggtctggatgaggtgtcaccagctgaaggagtacag
gagggtctcgagagaagaaacgaagagaaacctggcatggttcaggagcaaggcgagcag
gacggtcctttgagcagaaaacccgaatggccagtccccagttccgggtgtgctggtgca
agcacggagataaaacttctagagatgccccaacttcaagagatggacgagacgcaaaac
ggctgctgctcaacaaatgatatggacagcagtaaacaagcactgctgagtcgattgcac
actgagtctggaaatggaaatcctgagaagaggctcacggatgccacctctagcactgcc
atcactgaggggtccacagagagcacaagcgtcatcatcaacattggtcgtgaaggcgtg
cctgccgactccaccgtggtacagagtgcaggccacgactcaaagtcatgttcgttgtct
gcgaagaataacaaagaggctatttgtgaccatgagacaaaggtagcaatctcagagctc
attaagttgaaaatccgtcctagattgaaatccatggcgcgactgtcccggttgagagtg
atgaatcactctggttccaggggtcattctcatgaccagtcttccaccaagtcagtgagt
gagaagatggacggagaggcgagccccctgaaggagagactgacaaaagaggaggaagaa
gaggaagatgaaggcgatgccagggtgatgaagataaaggagaaaggcttggagtctccc
aaagccatcgtgccttacagctctatgttcatcttcagctcaaccaacccattacggaaa
gtgtgccactacattgtgaacctacgctactttgagatgagtatcctgcttgtgattgca
gctagtagcattgcactagcagctgaagatccagtgttaacaaactcagagagaaacagg
gttctcagatactttgattatgttttcactggtgtgtttacctttgagatggtgataaag
atgattgaccaaggtcttgtcctacatgaagggtcatacttccgtgacctttggaaccta
ctggatttcgtagtggttgttggggccctgatagcatttgctttggcgaatgttctaggg
accagtaaggggcgtgacatcaagaccatcaagtctttgcgtgttttgcgggtgctacgt
ccattgaaaaccatcaagaggcttcccaagctgaaggccgtgtttgactgtgtggtgacc
tctctgaagaacgtattcaacattctcatcgtctacaagctgttcatgttcatctttgcc
gtaatcgcagtgcagcttttcaagggcaaattcttctactgcaccgacagttccaaagac
acagaaaaggattgcataggaagctatgtggatcatgagaagagtagattggaagtgaag
cgccgagagtggaagcgccatgacttccattatgacaacatcatctgggcacttttaacc
ctcttcactgtctcaacaggcgaggggtggccacaggtactgcagcattcagtagatgtg
actgaggaggaccgggggcccagccgcagcaaccgaatggagatgtccattttttatgtg
gtctactttgtggtttttccatttttctttgtcaacatctttgtggctctcatcatcatc
acttttcaggagcaaggggacaagatgatggaggagtgcagtttggagaagaatgagaga
gcatgtatcgactttgccatcagtgccaaaccactgacccgctacatgcctcagaaccgt
cacacttttcagtaccgggtttggcatttcgttgtttcaccttcttttgagtatactatc
atggctatgattgctctcaacactgtggttctgatgatgaagtactattctgctccatat
acatatgagctggcattaaaatatctgaacatcgcatttacaatgcttttctctcttgaa
tgcatattgaagataatcgcttttggtttcctgaactatttccgagacacatggaacata
tttgacttcatcacggtgattggcagtataacagaaataatccttactgacagcaagctg
gtgaacacgagcagcttcaacatgagttttctgaagctcttccgggccgcccgcctcatc
aagttgctgcgccaaggctataccatccggatcctgctgtggacctttgtgcagtccttc
aaggccttgccctacgtctgcctcctgattgcaatgctcttcttcatatacgccatcatt
gggatgcaggtttttggaaacataaaactggacgagaacagccacatcaaccgtcacaac
aatttccgcaccttcctcagctcccttatgcttcttttcaggagtgccacaggcgaagcc
tggcaggagatcatgctctcatgtctaggtgacaagggctgtgagccagacacaactgca
ccttctgggccgacttccaatgaccgctgcggaacagatcttgcatatgtctattttgtc
tccttcatcttcttctgctcctttctgatgttgaacctcttcgttgctgtcattatggat
aactttgagtatctgacacgggattcctccattttgggacctcatcacttggacgagttt
gtccgaatttgggccgaatatgaccgagctgcatgcggcaggatctcctataaagagatg
tacacagtagtacgagtgatatctcctccactgggcctgggagagaactgcccctacagg
gtggcgtgcaagaggctggtcctgatgaacatgccggtgactgaagacatgaccgtgcac
ttcacctccaccctcatggcactcatccgcacagctctggacatcaaaattgcgaaaggg
ggtgcagaccgccagcaactggatgtggaactgcaaaaggacatattggccatttggcca
cacttgtcacagaagatgctagacctgcttgtacctatgccaagagcgtcagacctgacg
gttgggaagatctatgctgctatgatgataatggattactataagcagagcaaagtcaag
aagttgaggcagcagctagaggaacagaaaaacgctcctatgttccagcgcatggaggct
tcctctctaccacaggagatcatatccaatgctaaagccttgccgtaccaccagcaggac
accctctctggcttgagtggattcccatccctgagccctcttacacctcaggagttgttc
cagccagcgtgtttggataggcgaccaggacccttccaggaaaagctatctctggagcca
gaggttagagagtttcacagaacacagccctctaactgtggaaactatctccctgtggac
acgcaggagcgtaccgcatctctgagggcctcctccatgccacgactggccgtggatccc
caggttctgactgaggccagtgcaatgcgaaggtcattctccaccacaggtggcaaacgc
cctcatacttcctggttggatgagctgtcaatggaacgctgcaatgagcactcttacaaa
tcccgcaggcgcagttatcatgcctcgttgcgcatgtctggacaccgtctgaatgctgat
tcaggccaccgatccgacacacatcgctccgggggcagagagcgtggtaggtcgaaggaa
cgcaaacatttactctccccagatgtctcccgttgcaactctgaggagagaagtcctcaa
ccgaacagtgagatgcgggagaggcgtcagtcaaggtcaccaagtgagggcaggccacac
acaccttatatgcagggtgtcagctcattgagtgaaagctccatcccttcggacactagc
actccaagaagaggtcggcggcagctccctccagtacccccaaaacctcggccacttatc
tcatatgcttccatggtgcggcgtcctggcaacacctcacccacactgagtggtaatgag
gatgggtctccccttcctgacaaggttctggacctcgatgacacaggtctaactggatct
acaagctcactgcaagggaaggtcagtcggcactctactccctcacactatatttcagag
ccttacctggccctccatgatgagctacaggggtcagactgtggtggggaagaagaggag
acactcaccttcgaagcagctgtagccacgagcctgggcagggccaacaccatcggatca
gcaaatcctatgcggcatggttggcatctgcccaatggccactaccggcgaaggaggaga
ggcggtgccacccagatgatctctggggctggctgtggtgtactgagtgacacagatgaa
gatgacaagtgctag
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integrated database retrieval system
