Pleurodeles waltl (Iberian ribbed newt): 138295641
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Entry
138295641 CDS
T10800
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138295641 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138295641 (NRXN1)
Membrane trafficking [BR:
pwl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
138295641 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
138295641
NCBI-ProteinID:
XP_069090146
LinkDB
All DBs
Position
5:complement(318914317..320388564)
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AA seq
1513 aa
AA seq
DB search
MTSLGFTRKIHTFRRTLRTHRLQAMAGLVRQGGLLIWAALMLGCVVDLGHSLEFPGTEGQ
WTRFPKWNACCESEMSFNMKTKSSSGLVVYFDDEGFCDFLELILHEGRLRLSFSIFCAEP
AILLSDTLVNDNDWHSVVIRRNFKNTTLILDKEAKWVEVKSKRRDMTVFSSLFIGGIPPE
LRAATLKLTFSAVKDHEPYRGWISDVRVNYTDSAPLESKEVKVADEKDPCGGASKEVTCL
NGGVCKVVNDEAMCDCAHTGYQGKDCSEEDNYVEGLAHLMMGDQGKDEYIATFKGSEFFC
YDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEA
LVEPVNGKFNDNAWHDVKVTRNLRQHSGVGHAMVTISVDGILTTTGYTQEDYTMLGSDDF
FYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDAKMKVHGVVAFKC
ENVATLEPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRRQRDAKHP
QMVKVDFFAIEMLDGHLYLLLDMGSGTNKIQALQKKVNDGDWYHVDFQRDGRSGTISVNT
LRTPYTAPGESEILDLDDDLYLGGLPENKLGLVFPTEVWTALLNYGYVGCIRDLFIDGQS
KDIRQIAETQSTAGVKSACSRETAKPCLSVPCKNNGACRDGWNRYVCDCSGTGFLGRSCE
REATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDA
GRVKLTVNLDCIRINCNSSKGPEILFDGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAVTG
QMAGDHTRLEFHNIESGIITERRYLSAVPSNFIGHLQSLTFNGMPYIDLCKNGDIDYCEL
NARFGFRNIIADPVTFKTKASYVALSTLQAYTSMHLFFQFKTISPDGLILYNSGDGNDFI
VVELVKGYLHYVFDLGNGANLIKGSSNKPLNDHHWHNVMISRDTNNLHTVKIDTKITTQS
TAGARNLDLKSDLYVGGVSKDMYKSLPRLVHAKEGFQGCLASVDLNGRLPDLISDAVLCN
GQIERGCEGPSTTCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFTKGGG
QITYTWPPNDRPSTRADRLAIGFSTSQKEAVLVRVDSSSGLGDYLELNIHQGTVGVKFNV
GTDDIAIEEVNAIINDGKYHVVRFTRSGGNATLQVDNWPVIERFPAGNNDNERLAIARQR
IPYRLGRVVDDWLLDKGRQLTIFNSQATIKIGGKDRGQPFQGQLAGLYYNGLKVLNMAAE
SDANIVIEGNVRLVGDVPSPMTTESTATAMQSEMSTSVMETTTTLATSTARKGKPSTREP
IGQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRPGGGSFPGSAEVIRESSSTTGMV
VGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSS
NKNKKNKDKEYYV
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttaggctttacccggaagattcacacctttcggaggaccctaagaacccac
agattgcaagccatggctggcttggtgaggcaagggggcctccttatttgggcagccctg
atgctgggctgcgtggtggacctggggcatagcttggagttcccagggactgaaggccag
tggacacgattccccaagtggaatgcctgctgcgagagtgaaatgagcttcaatatgaag
accaaaagttccagtggtttggttgtctactttgatgatgagggattttgcgacttcttg
gagctgattctgcacgagggccggctgcgactcagcttctctatcttctgtgctgagccg
gctatcctgctcagcgacactttagtcaatgacaatgactggcattcagtagtaattcga
cgtaacttcaagaacaccacactaatcttggacaaggaggccaagtgggtggaggtgaaa
tctaagcgtcgtgacatgacggtcttcagcagcctttttattggcggcatcccacctgag
ctgcgtgctgctactctcaagcttactttctcagcagtcaaggaccatgagccataccgg
ggctggatctcggacgtcagggttaactatactgactctgctcctcttgagagtaaagaa
gttaaagtggctgatgagaaggacccatgtgggggggcaagcaaggaggtgacatgcctg
aatggcggtgtctgcaaggtggtgaacgacgaagccatgtgcgattgtgcacacaccggc
tatcaaggcaaggactgcagtgaagaagacaactatgtcgaaggtctggcgcacctgatg
atgggcgaccaaggaaaggatgaatatattgcaaccttcaaagggtcggaattcttctgc
tatgatttgtcccagaaccctatccaaagcagcagtgatgaaatcacactttcatttaaa
actcttcagagaaatggactaatgcttcacacaggaaaatcagctgattatgtcaatctg
gcactgaaaaatggagcagtctcgctggtcattaatttggggtcaggtgcctttgaggcc
ctggtggaacctgtgaatggaaaatttaatgacaacgcctggcacgatgtgaaggtcacc
agaaatctgcgtcagcactcaggcgttggacacgctatggtgacaatatcagtggatgga
atactgaccacaacaggctacacgcaagaagactacaccatgctgggatcagacgacttt
ttctatgttgggggcagtcccagtacagcagacctcccagggtcaccagtcagtaacaac
ttcatgggctgcctcaaagaggttgtgtacaaaaacaatgatgtcagacttgagctgtct
cgacttgccaagcagggagatgctaagatgaaggtccacggtgttgttgcattcaaatgt
gagaatgtggcaaccttggaaccaatcacatttgagacccctgaatcatttatttcattg
ccaaagtggaatgccaagaaaactggctcgatatcctttgatttccgcaccacagagcca
aatggactgatactgtttagccatggcaagccaaggcgacagagagatgccaagcaccct
caaatggtcaaggtggacttttttgctatagagatgcttgatggtcacctctaccttctg
ttggacatgggatcaggtacaaataaaatacaggcgttgcaaaagaaggtgaatgatgga
gattggtatcatgtggactttcaaagagatggtcgatcaggtaccatttctgtcaacact
cttcgaacgccctacactgcacctggagaaagtgaaatcctagatcttgatgacgacctg
tatctgggaggcctaccagaaaacaaactaggactggtattcccaacagaggtgtggact
gctctgctgaactatggttatgttggctgcatcagagacttgttcattgatggccaaagc
aaagatattcgacaaatagctgaaacacaaagtacagctggtgtgaagtcagcatgctcg
agagaaacagcaaaaccttgcctgagcgtcccttgtaaaaacaatggagcctgcagggat
gggtggaaccgatatgtctgtgattgttctggtactggatttctgggaagatcttgtgag
cgagaggcaacggtgttgagctatgatggaagcatgtttatgaagatccagctcccagtt
gtcatgcacacagaggcagaagatgtgtctttgcggttcaggtcgcaacgggcgtatggc
attttgatggccaccacctccagagattcagcggacacccttcgcttagagcttgatgca
ggacgcgtgaaactgacggtcaacctagactgtatcaggattaactgtaattccagcaaa
ggcccagagatactgtttgatggctataacctcaatgataatgagtggcacacagtgcgt
gtggttcggcgtggaaagagtttaaaactcatggttgacgaccagcaagctgtgacaggt
caaatggcaggtgatcatacaagactggagttccataacattgagtctggaataataaca
gagcgtcgatatctgtctgctgtcccttccaatttcattggccatctacagagcttaaca
ttcaatggcatgccatacattgacttgtgtaaaaatggtgacatagactattgcgaactc
aatgcccgctttgggttccgtaatatcatagctgacccagtcacatttaagacaaaagca
agctatgttgcattgtccacacttcaagcctacacatccatgcaccttttcttccagttc
aagacgatatcaccagatggtctcatcctttataacagcggcgatggcaatgattttatt
gtagtggaattggtgaaagggtatctgcattatgtttttgacctcggtaatggtgccaac
ctcattaaaggaagctcaaacaaacccctgaatgaccatcactggcacaatgtaatgatt
tccagggacaccaacaaccttcatactgtaaagatagacaccaaaataaccactcaaagc
acagcaggagctagaaatctggaccttaaaagtgacctctacgtaggaggagtatccaaa
gatatgtataaatctttacccaggctggtccacgctaaggaaggattccaaggctgcctg
gcatcagttgacctgaacgggcgtcttcctgacctgatctccgatgcagtgctctgcaat
ggacagatagaaagaggatgcgaaggacccagcacgacgtgtcaagaggattcatgcgca
aaccagggagtgtgtttgcaacagtgggacggcttcagctgtgactgcagcatgacctcg
ttcagtggcccactgtgcaatgaccccggaacaacatatatttttaccaaaggcggagga
caaattacatatacatggcccccaaatgataggcccagcacacgtgctgacaggttggct
ataggattcagcaccagccaaaaagaagctgtgttggtccgagtggatagttctagtgga
cttggcgactacctagaactaaacattcaccagggaacggttggggtgaaattcaatgtt
ggaacagatgacattgcaattgaagaagtcaatgcaatcatcaacgatgggaagtaccac
gtagtacgcttcacaagaagtgggggtaatgcaacattgcaggtggacaactggccggta
attgaacgcttcccagcaggaaacaatgataacgaacgcctggcgattgctagacagcga
attccatatcgacttggtcgagtagttgatgattggctactcgacaaaggacggcagtta
acaatcttcaatagccaagcaactataaaaattggaggcaaggacagaggtcagccattc
cagggccaacttgctggtctttattacaatggcttgaaagttctaaacatggctgctgaa
agtgatgccaacattgtgatagaaggaaacgtgagacttgttggagatgtgccttcccct
atgacaacagagtcaacagctacagcaatgcagtctgagatgtctacatctgtcatggaa
accacaacaactttggccaccagcactgccagaaaaggaaaaccatctacacgagaacct
attggacagaccactgatgacattttggtggcctcagctgaatgcccgagtgatgatgaa
gacattgatccgtgtgagccaagctcaggtgggttagcaaatccaactagaccaggtgga
ggatcttttcctggctcagctgaagtcattcgagagtcaagcagtacaacaggcatggtg
gttgggattgtggcagcagcagcattgtgcatcctcatcctactttatgccatgtacaag
tacagaaacagagatgaaggctcctaccatgtcgatgagagtcgaaactacatcagtaac
tcagcacagtctaatggggctgtaatcaaggaaaaacagcccaatagtgctaaaagttcc
aacaaaaacaagaaaaataaggataaagaatattatgtctga
DBGET
integrated database retrieval system
