Pleurodeles waltl (Iberian ribbed newt): 138295723
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Entry
138295723 CDS
T10800
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04517
IgSF CAM signaling
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138295723 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138295723 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138295723 (SPTBN1)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138295723 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
138295723 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
TPR_24
Motif
Other DBs
NCBI-GeneID:
138295723
NCBI-ProteinID:
XP_069090289
LinkDB
All DBs
Position
5:complement(425074909..425577219)
Genome browser
AA seq
2361 aa
AA seq
DB search
MTAVATDYDHMEIQQQYTDVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFTK
WVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQF
LKEQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLW
CQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAE
QHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEK
MIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNL
EVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKLEQ
LARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVV
AVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKVFQEMLYIMD
WMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFAMEGEGYK
PCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILS
SDDYGRDLTSVVRLLSKHNAFEDEMSGRSGNFRQTIREGEEMIKEDHFGSEKIRERINDI
EEQWASLEQLSAIRKKHLKEAASLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSL
VKKHKDVAEEIASYRAIIDSLHEQAQALPAEHVDSPDVQGRLSGIEERFKEVAELTRLRK
QALQDALALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQA
SRVAVVNQISRQLIHSGHPSEKEIKVQQDKLNTRWGQFRELVDKTKDALSSALSIQNYHL
ECNETKSWIREKTKVIESTQELGNDLAGVMALQRKLTGMERDLAAIEAKLSDLQKESEKL
QAEHPDQAQAIGERLGEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQ
TAIASEDMPNTLAEAEKLLTQHENIKNEIHNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQ
RLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTELPTTLE
AAEAAIKKQEDFMTTMDASEEKINAVIETGRRLVSDGNINTDKIQEKVDSIDSRHRKNRQ
AASELLMRLKDNREMQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAE
LASNKEWLDKIEKEGMLLVAEKPETEEIVKEKLTSLHEMWEILESTTQTKAQRLFDANKA
ELLTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELESQ
AKALSQEGKSTDEVDGQRVIVEKRFVQLLAPLNERKDYLLASKEIHQFNRDVEDEILWVE
ERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQHRNDDIFERSQNILKDSSLNAEAI
KQRLADLQRLWNLLIEETEKRHRRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKD
EQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSQVDKLYAGL
KDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREF
ARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAA
SYELHKFYHDAKEIYGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQL
QEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRATLVDTGDKFRFFSMVRDL
MLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHY
ASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSSR
EIGQSVDEVEKLIKRHEAFEKSVATWDERFSALERLTTLELLEVRRLQEEEERKRQPPSP
EPSPKASEESESPQQWDGVKEGEHISQNGLPSDQDSPRVSENIEGNEMVNGASEQRSSSK
ETSPVPSPTSDRKSKTIIHGQSASTLPAKTQDSPPSQMEGLLNRKHEWETHNKKASNRSW
HNVYCVINNQEMGFYKDSKNAASGIPYHNEIPVTLKDGVCEIAIDYKKRKHVFKLKLLDG
NEYLFQAKDEEEMNSWIQAITTAITSDKTEVSTSTQSTPATSRAQTMPASVTLTTESSPG
KREKDKEKDKEKRFSLFGKKK
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggtagcaacggattacgaccacatggaaatccagcaacaatataccgatgtc
aacaaccgctgggatgacgagtgggacaatgagaacagctccgcgcgcttgtttgagcga
tcgcgcatcaaggctttagcagatgaacgtgaggcggtgcaaaagaagaccttcacaaaa
tgggtcaactcgcacttggcacgcgtctcatgcagaattacggacttgtacacagacctc
cgtgacggacgaatgctcatcaagctgctggaggtgctctctggagagaggcttcccaaa
cccaccaaggggaggatgcgcatccactgcctggagaacgtggacaaagccctgcagttc
ctgaaagagcaacgggtgcatttggagaacatggggtcgcatgacatagtggatgggaac
cacaggctgatcctgggtctgatctggaccatcattctccggttccagatccaagacatc
agcgtggaaacggaggacaataaggaaaagaaatctgccaaggatgccttgctgctgtgg
tgccagatgaagacagctggttatcccaacgttaacatacacaacttcaccactagctgg
agggatggaatggccttcaacgcactgatacacaaacacaggccagatttaattgatttt
gataaattaaaaaaatctaacgcacactacaatctgcaaaatgccttcaaccttgcagag
cagcatcttggcctgaccaagcttcttgaccctgaagacatcagcgttgaccatcctgat
gagaaatccatcattacgtatgtggtgacatattaccactacttctccaagatgaaggcc
ttagcagtggaaggcaaacgtattggaaaagtcctcgataatgccatagaaacggaaaaa
atgattgaaaagtatgaatcgctggcttctgaccttcttgagtggattgaacaaaccatc
atcattttgaataatcgcaaattcgccaactcgttggttggtgtgcaacagcagcttcag
gcgttcaacacttaccgcactgtggagaaacctcccaaatttacagaaaaaggaaactta
gaggtgctgcttttcacaattcaaagtaaaatgagggcgaataatcaaaaagtgtatatg
ccacgcgagggcaaactcatctcagacataaacaaggcctgggaaagactggaaaaagca
gaacatgaacgtgaactggcactgcgaaatgagctcataaggcaagagaaactggaacag
ctggcacgcaggttcgatcgcaaggcagctatgagggaaacgtggctcagtgaaaatcag
cgactagtttctcaggacaattttggttttgacctaccagcagtggaagctgctaccaaa
aaacacgaagcaattgaaacggatattgcagcgtacgaggagcgcgtacaagcagtggtt
gctgtggccagagaactggaagcagagaactatcatgacatcaagcggattactgcaagg
aaagacaatgtcatccgcctttgggaatacctactggagttacttagggcacgaagacag
cgactggaaatgaaccttggcttgcagaaagttttccaggaaatgctctacattatggat
tggatggatgaaatgaaggtgctgctgttgtctcaggactatggaaagcatctcttggga
gtggaagacctgctacagaaacatgcgttggttgaggcagacattgcaattcaggcagaa
cgtgtgcgaggtgtcaatgcttctgcccagaaatttgctatggaaggagaaggttacaag
ccttgtgaccctcaagttatacgcgatcgtgtggctcacatggagttttgttatcaagag
ttgtgtcagctggcagcggaacgtcgtgctcgtttagaggagtcaaggcgcctttggaaa
ttcttctgggaaatggcagaggaagagggctggatacgtgaaaaagaacagatcctgtca
tcggatgattatggcagggacttaaccagtgtggtccgtcttctcagcaaacataatgca
tttgaggatgaaatgagtgggcgcagtggtaattttaggcaaactattagagaaggtgaa
gaaatgattaaagaggaccattttggatctgagaaaattagagaaagaatcaatgacatt
gaggaacagtgggccagtcttgagcagctctctgccatcaggaagaaacatctaaaggag
gccgccagccttcatcaattccaagcagatgcagatgatattgatgcttggatgttggac
atcctcaaaattgtatccagcaatgatgttggccatgatgaatattccactcagtctctg
gtcaaaaaacacaaagacgttgccgaagagattgcaagctatcgagcaattattgactca
ctacatgaacaagctcaagctcttccagcagagcatgttgattcaccagacgtgcagggc
agattgtcaggcattgaggagaggttcaaggaggttgctgagctgacacgacttcgtaag
caagctttgcaggatgctcttgctttgtacaagatgttcagtgaagcagacgcttgtgag
ctttggattgatgagaaggagcagtggctgaataatatgcagattccagagaaactggaa
gatcttgaagttatacagcacagatttgaaagcttagagcctgaaatgaacaaccaggca
tcccgagtggctgttgtaaaccagatttctcgccagttgatacacagtgggcatccaagt
gagaaagaaatcaaagtacagcaagataagctgaatacaagatggggtcagtttagagaa
ctggtggacaaaaccaaagatgctctcagctccgccctaagtatccagaactaccatctt
gaatgtaatgaaacaaagtcatggattagagagaagaccaaagtgattgaatcaacacaa
gaactcgggaatgaccttgctggagtaatggccctgcagaggaagctgactggcatggag
cgggacttggcagccattgaggcaaagttaagtgatctacaaaaagaatcagagaaactt
caagctgaacatcctgatcaggcccaggcaattggtgagcgtcttggtgaaatcaatgat
gtatgggaagaaatgaaaaccacccttaaaaatcgtgaagaatctctgggagaagccagt
aaacttcaacagttcttgcgtgacttggatgacttccagtcctggctttctagaacgcaa
acagcaattgcttcagaagacatgccaaacacattggctgaggccgaaaaacttcttact
cagcatgagaacattaaaaatgagattcacaactatgaggaggactatcagaagatgagg
gacatgggtgaaatggtgacccagggtcagactgatgcccagtacatgtttctgcggcag
cgtcttcaggcattggacaccggatggaatgagcttcacaaaatgtgggagaacaggcag
aatctcctgtctcaatcccatgcctaccagctgtttctcagagacactaagcaggctgaa
gcatttctcaacaaccaggaatatgttttggcacacactgaattgcccactacattggaa
gcagctgaagctgcaattaaaaagcaggaggacttcatgaccacaatggatgcaagtgaa
gaaaaaataaatgctgtcattgagacaggcagacggctggtcagcgacggcaacataaac
acagacaagatccaggagaaagtggactcaattgacagcaggcacagaaagaatcgtcag
gcagccagcgagcttctgatgaggcttaaagacaacagagaaatgcagaaatttctacag
gattgccaagagctctccctctggatcaatgagaagatgctcacagcccaagacatgtcc
tacgacgaagccagaaatctgcacagtaaatggttgaaacaccaagcctttatggcagaa
cttgcatccaacaaggagtggctggacaaaattgagaaggaagggatgttgcttgttgcg
gagaaaccagaaactgaggagattgtgaaagaaaagttgacatccctccatgaaatgtgg
gaaatactggagtccaccacccagaccaaggcccagcgtctttttgatgccaataaagca
gagctactcacccaaagctgcgctgacctagacaaatggctgcatgggctggaaagccag
attcagtcagatgactatggaaaggatctgactagcgtaaacatcctcctcaagaagcag
cagatgctagaaaatcagatggaagtgcgaaagaaggaaatagaagagttggaaagccag
gcaaaagcgctgagtcaggaggggaagagcactgatgaggttgatgggcagcgtgtaatc
gtggagaagaggtttgtacaattactggcccctctgaatgagagaaaggattacctactg
gcctccaaagaaatccatcagttcaacagggatgtggaagacgagattctgtgggttgaa
gaaagaatgcctattgcaacatctactgatcatggtcataaccttcaaaccgtgcaacta
ctaatcaagaaaaatcagacccttcagaaggagatccaaggccatcagcaccggaatgac
gatattttcgagaggagccaaaatattctcaaagatagcagccttaatgcagaagctatt
aagcaaaggcttgctgatctccagaggctgtggaacctcttgattgaggaaactgagaag
cgccacaggaggctggaggaatcgcacaaggctcagcaatattactttgatgctgcagag
gctgaagcatggatgagtgaacaggaactgtacatgatgtccgaggagaaagcaaaggat
gaacagagtgcagtgtctatgttgaagaagcatcagattttggagcaggcggtggaagat
tatgcggagacggtgcatcagctctcgaagacgagtcgagcgttggtggcagacagccac
ccagagagtgagcgcattagcatgcgacagtcccaggtcgataaactctatgcaggtctg
aaggatttgtcagaggagcgaagaggcaaactagatgaacggcatcgactcttccagctc
aaccgtgaggtggatgacctggagcagtggatagcagagagggaggtggtggctggatca
catgagctgggacaggactatgaacatgtgacaatgttacaggagagattccgtgaattt
gcccgtgacactggaaacatcggtcaagagcgggtggacacagtcaaccacatggcagat
gaactcatcaattctggacattctgatgcagccacgatcgctgagtggaaggatggtctg
aatgaagcctgggcagacctccttgagctaattgatacaagaacacaaattctcgctgcc
tcatatgaacttcacaaattttaccatgatgcaaaggaaatttatggacgcattcaggac
aaacacaagaaactgccagaagagcttggcagagaccaaaatacagtggaaacactacag
cggatgcacacaacatttgagcatgatatccaggcattagggacacaggtgaggcagctg
caagaggatgctgcacggcttcaggctgcctatgctggagacaaggctgatgacattcag
aagagggagaacgaagttttggaggcctggaaagcattattggatgcctgtgagggtcgc
agagctacattggtagacacaggggacaaattccgtttcttcagtatggtgcgtgatctc
atgctttggatggaggatgttattcgtcagatagaggcccaagaaaagccaagggatgtt
tcatcggttgaattactgatgaacaatcatcagggcatcaaagcagaaattgatgctcgt
aatgacagttttaccacctgcattgaacttggcaagtctctactggcaagaaaacactac
gcatcggaggagatcaaggagaagttattgcagctgacagagaagcgaaaagaaatgatt
gacaagtgggaagatcgatgggagtggcttagactgattctggaggtgcaccagttttcg
agagatgccagtgtagcagaagcctggctgctgggacaggagccgtacttgtcaagtcgt
gagattggtcaaagtgtggacgaagtagaaaagctaatcaagaggcatgaagcttttgag
aaatctgtagctacatgggatgagagattttcagctctggaaagattgactacattggag
ttattggaagtgcgtagactgcaagaggaagaagagagaaagaggcagccaccgtctcca
gaacctagtccgaaggcttcagaggagtctgaatctccacaacagtgggatggagtaaaa
gaaggggagcatatctcacaaaatggattgccatcggaccaggattctccacgggtgtcc
gaaaatattgaaggtaacgaaatggtcaatggagcatcagaacaaagatccagttcaaaa
gagacaagcccagttccttcaccaacttccgatcgcaaatccaagacgatcattcatggt
cagtctgcttcaacccttcctgccaaaacccaagactcccctccatctcaaatggaaggc
ttgcttaatcgtaaacatgagtgggaaacacacaacaagaaagcctcaaacaggtcttgg
cataatgtgtattgtgtgatcaacaatcaagagatgggcttctacaaagattccaaaaat
gctgcctctggtattccctaccacaatgagatcccggtcaccctgaaagatggtgtctgt
gaaattgcaatagactacaaaaagaggaaacacgtgtttaagctcaaattattggacggt
aatgagtatcttttccaagccaaagacgaagaggaaatgaattcctggattcaggcgatc
acgactgcaatcacctctgacaaaacggaagtgtccacaagcacacaaagcaccccagcc
acgagccgggcacagacaatgccagccagcgtgaccctgaccaccgagtccagccctggc
aagcgggagaaagacaaggaaaaagacaaggagaagaggttcagccttttcggcaaaaag
aagtga
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integrated database retrieval system
