Pleurodeles waltl (Iberian ribbed newt): 138295741
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Entry
138295741 CDS
T10800
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Protein phosphatases and associated proteins [BR:
pwl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138295741 (VPS54)
Membrane trafficking [BR:
pwl04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
138295741 (VPS54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138295741
NCBI-ProteinID:
XP_069090327
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Position
5:complement(440572410..441127865)
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AA seq
976 aa
AA seq
DB search
MASSHTSSAVTHTNSKDDFCRKEVAKRLRPVLSLPDVCPKEPTGKPSSLCDGPSVVADQH
RWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVETEVMPSFYLPVITKESFALYKQ
DIIMREKVHERCKNVCPPKDEFDRNALSRNNVDKSRTDLEQVPKIFMTPDFALEDSSTFN
AVLPWSHFSSAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKMLRDKISQIDKVMCEGSFNILRQTMTRNNCVKVYNKLKLMATVHQTQ
PTVQLLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSG
YARSDLNRPLEEDFQILEEERLVSLVFGLLKQRKLNFYEIYGEEMSTTAKNIIKQCVIST
VSQIEEIDAETCSLADQMRMMNFPHWFDLIQTIFSKFTVFLQRVKATLSVIRDVVLMVLD
KNQRSKDLQGMLVQKGSGKDKNMDTELAYLTHEGLFISDAFTDGPLSSMSEHAISQRNTS
PISEVCGSNSVSDPECTTDSSSSKDHTSSSVTTGGVEIIISDDIKITDLELGKLANNIQE
LLYNASDICHDRCVKFILARAKDGFLEKLNSSEFVALSRLVESFVLDTEKVCGRRSMSLR
GALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSITDGKILLPEKRTG
VAEERKPSDFLIVEGQKFAVVGTVLLLIRIILEYCQCVDDIPSITTDMLTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYVPIIRAHFEARMQPKHYSMLR
HFDHITKDYHDHVAEISAKLVAIMDGLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHFKRQLAHLNVVNDGGPQHGLVAADVAFYTGNVQGLKS
LNYLDLNMAEIWEQKR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagccacacttcttcagcagtgacgcacacaaacagcaaagatgatttctgt
agaaaagaggttgcaaaacgtttaagaccagtgttgtccttgcctgatgtgtgtcctaag
gagcccacaggcaaacccagcagtttgtgcgatggcccatctgttgttgcagatcagcac
agatggacaatttatcattccaaagtgaacctcccagctgcactaaacgatcctaggtta
gcaaaaagagaatctgatttctttacgaaaacatggggactagactttgtggagaccgaa
gtcatgccttcattctacctccctgtgattaccaaggaaagttttgctttgtacaaacaa
gacattattatgcgagaaaaggttcatgaacgatgcaaaaatgtttgtcctcctaaggac
gagtttgataggaacgctctgtctcgtaataatgtagataaatccaggactgatctggag
caagtacctaagatttttatgacaccagattttgccttggaagattcctcaacatttaat
gcggttttaccttggtcccattttagttctgctggagggaaaggaaaccgtgacgcagct
tcatcaaagttacttcaagaaaagctgagccattacctggatattgttgaagtgaacatt
gcacaccagatttctttacgttcagaagcattttttcatgcaatgacgtcccaacatgaa
cttcaggactacctcaggaaaacctctcaggctgttaaaatgcttagagataaaatttct
caaattgacaaagtaatgtgtgaaggatccttcaatattctcagacaaacaatgaccaga
aataactgtgttaaggtgtacaataaactcaagttaatggccacagtgcatcagactcaa
cccacagtacaattattgctatcaacttctgaatttgttggtgcattggacttgatagcc
actacgcaggaggtgctgcaacaggagcttcaaggcattcacagtttccggcatcttgga
tctcagctctgtgaactggaaaagcttattgataaaatgatgattgcagagttttctgga
tatgccagaagtgatttgaacaggccgctggaagaagattttcagattttggaagaggaa
aggctagtatccttggtgtttgggcttttaaaacaaaggaagctcaatttctatgagata
tatggtgaagaaatgagcacaacagcaaagaatatcattaaacagtgtgtgattagtaca
gtatcgcagatagaagaaattgatgcagaaacatgtagccttgctgatcagatgagaatg
atgaacttcccacattggtttgacctaatacaaactattttttctaagtttactgtattt
cttcaacgggtgaaggcgacattaagtgtcattcgtgatgttgttctgatggtcctagac
aagaaccaaagaagtaaagacctacagggaatgttggtacagaagggctcaggaaaagat
aaaaatatggacacagaactggcatatttgactcatgaaggactatttataagtgatgca
ttcactgatggcccattatcttcaatgtcagagcatgctatctctcaaaggaatacttca
cccattagtgaggtgtgtggcagcaactctgtgtccgatccagaatgcaccacagactct
tcttctagcaaagatcacacctcctcttctgtcacaacaggaggagtagaaataataatc
agtgacgacataaagataactgatttggagcttggaaaacttgcaaataatatccaagaa
ctactttacaatgcctcagatatatgccatgatcgatgtgtcaaatttattttggcaaga
gcaaaagatggatttcttgagaagctgaactcttcagaatttgttgccctttcacggtta
gtggagtcctttgtgctggacactgagaaggtttgtgggcgaagaagtatgtcattgcgt
ggagcgctccaaagtcaagctaacaaatttgtaaacagattccatgaagagcgaaaaaca
aaactaagcttgctgttagataatgagcgctggaaacaagctgatgtccctgcggagttt
caggatttagttgactctataacagatggaaaaatcttgttgcctgagaaaagaactgga
gttgctgaagagcgaaagccgtctgatttccttattgtagaaggacaaaaatttgcagta
gttggaaccgtgttgttgctgataagaataattctcgaatactgccagtgtgtggatgac
attccttccatcactactgacatgctaacacgcttgtcggatttactgaagtactttaac
tcaagaagctgtcagctagttcttggtgcaggagcactgcaagttgttggtttaaaaaca
ataacaacaaagaacttggctctttcctcacgctgcttgcagctgattgtacactatgtt
cccattattagagcacattttgaagctcgaatgcagcctaaacactacagtatgctcagg
cattttgaccacattaccaaggactatcatgaccatgtagcagaaatttcagctaagcta
gtagctataatggatggcttatttgacaaactcttgtcaaagtatgaagtgaaagcccca
gtgccctcggcctgtttccgaaatatctgcaaacagatggcgaagatgcatgaggcaata
tatgatcttcttcctgaggagcaaacgcagatgctgtttttaagaattaatgcaagttat
aagcttcattttaagaggcagctggcacacctgaacgtagtcaacgatggtggaccacag
catgggttggtggcggcagatgtagcgttttacactggaaatgttcaaggcttgaaaagc
ctcaactacttggaccttaacatggctgagatttgggaacagaagaggtga
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