Pleurodeles waltl (Iberian ribbed newt): 138295818
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Entry
138295818 CDS
T10800
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138295818 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138295818 (PNPT1)
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138295818 (PNPT1)
Enzymes [BR:
pwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
138295818 (PNPT1)
Messenger RNA biogenesis [BR:
pwl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
138295818 (PNPT1)
Transfer RNA biogenesis [BR:
pwl03016
]
Prokaryotic type
tRNA degradation factors
138295818 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
138295818
NCBI-ProteinID:
XP_069090465
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All DBs
Position
5:complement(537964946..538322710)
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AA seq
810 aa
AA seq
DB search
MPVTLAVQTVMAASSQCRCRAGMLLLLLQRGISASAPRYRVGNGASVFLSQFRAAQSRAW
SNKHAASVQVDVGGRKLEISSGKLARFADGCAVVQLGDTSVMVTAVSKTKPSPSQFMPLV
VDYRQKGAAAGRIPTNHLRRELGSTDNEILTGRIIDRSIRPLFPSGYFYDTQILCNILAV
DGVNEPDILAINGASAALALSDIPWNGPIGAVRIGLVDGEFIVNPTRKEMVSSTLNLVAT
GAPQSQIVMIEAGAENVLQQDFCHAIKLGVKHTQQIIQGIQQMVKEYGPEKRALQKSFSA
PEHIVECARRLATQRIHAVFSDYTHDKISRDEAINKIRLETEETLKEQFPEADPYETMES
FSIVSKEVFRNIVLNEYRRCDGRDLTSLRDINCQVDLFKPLHGSGLFQRGQTQVLCTVTF
DSLESSMKSDPVTAALSGVKDKNFMLHYEFPPFATNEIGRVTGTNRRELGHGALAEKALK
PVIPKDFPFTIRITSEVLESNGSSSMASACGGSLALMDAGVPISAPVAGVAVGLVTKFNP
EKYGEIVDYRLLTDILGIEDYNGDMDFKMAGTSKGITALQADIKIPGLPLKIVMEAIQQA
TVAKKEILQIMSKTIAKPRPNRKENGPVVETVQVPLSKRIRFVGPGGYNLKKLQAETGVT
VSQLDEETFSVFAPTPGAMHEAQEFIIEACKDDQDHQLEFGAVYTATITEIRDIGVMLKL
YPNMTPVLLHNSQLDHRRIKHPSALGLEVGQQIQVKYFGRDPTDGRMRLSRKVLQSPAAT
VVKTLTDRNSIVLGSTSPVTDTSSFSGTVD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacactggctgttcagactgtcatggcagcctccagtcagtgtcgctgccgt
gccgggatgttgctgttgctccttcagagaggaattagcgccagcgcacctcgataccgg
gtggggaatggtgcctctgtttttctgagtcagtttagagccgcccagagcagagcttgg
agcaacaaacatgctgcgagtgtgcaggttgacgttgggggaagaaaattggaaatctct
tctggaaagttagccagatttgcagatggatgtgcagtagtgcagttaggtgatacgtcc
gtcatggtcacagctgtcagcaaaacaaagccatcaccctctcagttcatgcccttagtg
gttgactatcgccagaaaggagctgcagctggaaggattccaacaaatcatttgaggaga
gagcttggctcaacagataatgaaattcttacaggcagaatcatagaccgatcaattagg
ccattgtttccatcaggttacttttatgacacacagatactttgcaatatcttagcagtt
gacggtgtcaatgaaccagacatacttgcaattaatggagcttctgcggcgcttgcacta
tctgatattccatggaatgggccgattggtgctgtcaggataggactcgtcgatggagaa
tttattgtgaatccaaccagaaaagagatggtttcaagcacattaaatttagtggccacc
ggagctcctcaaagtcagattgtcatgatagaagctggggcagaaaacgtgctgcagcag
gacttctgccacgccatcaaattgggggtgaagcacacacagcagattatccaaggcatc
caacagatggtaaaagaatatggaccagaaaaaagagctcttcagaaatccttttctgct
cccgaacatattgttgaatgtgcaagacggcttgccacacaaaggatacatgcagtgttc
tcggattatacacatgacaaaatttccagagatgaagctattaacaagataagacttgaa
actgaagaaaccttgaaagaacagtttccagaggctgatccgtatgaaacaatggagtcg
ttcagtattgtttcaaaggaggtgtttagaaacattgtattgaatgaatatagacgatgt
gatggtagagatctgacatcacttcgagatataaattgtcaagttgatttatttaaaccc
cttcatggatcagggttatttcagaggggtcagactcaggttctttgcactgttacattt
gactcccttgaatcaagtatgaaatctgatcctgttactgccgctctaagtggtgtgaag
gacaaaaatttcatgctacattatgagttccctccatttgcaacaaatgaaattggacga
gttactggaaccaatagaagggaacttggtcacggtgctcttgcagagaaagcattaaag
ccagttattcctaaagatttccctttcactataagaataacgtccgaagtcctggaatcg
aatggatcatcatcaatggcttctgcatgcggaggaagtttggcattaatggatgcaggt
gtgccaatttcagcaccagtggcaggcgttgctgtgggactagttaccaagttcaatcct
gaaaaatatggagaaatagtagattaccgtttgctaacagatatcctgggaattgaggat
tacaatggcgatatggacttcaaaatggcagggactagtaaaggaataactgcattacag
gcagacatcaagatcccaggtcttcccctaaaaattgtgatggaagccatccaacaagcc
acagttgcaaagaaagaaatattacagattatgagcaaaactattgcaaaacccagacca
aacagaaaagagaatggaccagttgtagagactgttcaggtaccattatctaaaaggata
cgatttgtgggtcctggtggttataatttaaaaaaacttcaagctgaaacaggagtgact
gtaagtcaattggatgaagagacattttctgtatttgcaccaacccctggtgctatgcat
gaagctcaggagttcatcattgaagcctgcaaagatgatcaagatcatcagttggaattt
ggagcagtttatacggctaccatcactgaaatcagggatattggagttatgctgaaacta
tatccaaacatgactccagtgctacttcataattcacagctggatcatagaaggattaaa
catcctagcgctctaggactagaagttggccaacaaatccaggtgaaatactttggccgt
gatccgacagatggcaggatgagactttcacgcaaagtgcttcaatctccagccgcaact
gttgttaaaaccttaacagacaggaacagtattgtactgggaagcaccagccctgtaact
gacacttcctccttttctggaacagtagactag
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