Pleurodeles waltl (Iberian ribbed newt): 138295979
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Entry
138295979 CDS
T10800
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138295979 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138295979 (ARID1B)
03021 Transcription machinery [BR:
pwl03021
]
138295979 (ARID1B)
03036 Chromosome and associated proteins [BR:
pwl03036
]
138295979 (ARID1B)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Helix-turn-helix
ARID
138295979 (ARID1B)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138295979 (ARID1B)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138295979 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
138295979
NCBI-ProteinID:
XP_069090767
LinkDB
All DBs
Position
5:complement(707844256..708608905)
Genome browser
AA seq
2313 aa
AA seq
DB search
MAAQVVTAAAVAAAAAQTNNKGKNPGLSPSISPERGPGKAGITMPAGEHGTSGSGGVSGS
INNNNNNGEHHHHLQLHHHHLQHHHEQLSMANARSASPSRDPSSTSNSSSIGSSDAMEGG
SSALSSPSAGLETSVLPNHKLKSGRGGNDDGDQHPAHHQLHHHPVQHLHHHSHLHHPHPQ
QLHQQHHHHLQSLHRQQQHPYQQGGGQQAPDMDPHPHGAGRTKECATTGHLEQRTKPPTV
IRGPLVKEEEEDPLGELGSGGGPYSEQQQPVLTPVSGTGGPHSNNNGTGHQHHQGGSGRA
SSHSSGSSSSSSSDYNNHYYGGGGCSPAPVTGSRAVGPSFDQHVGQQSPGVGLMQHPESG
SHNSTNNTNSHEAYSNHSGPAYNHYPGSYPVRPSRGGGGAAPMESRAGSYGGYGVVGSPR
HQQGSSTSGGTPSSLNKAGGFQRFAGQQSQHPSGATPTLNQLLTSPSPMMRSCGSGYPDY
SSSSPHAPQQQPPAGMGKDMGSPQYGNTGNQVWGGPQRSHPAMSPGSSVHSHGRAQGSPM
DPMVMKRPHYGMGTNPYSPAPTQQNNPYSGQAYAPSVPQRYPVVMPGRPGAIGGMQYPPQ
QMPPQYGQQGVSGYCQQSYYSQQPQPQYLSQAQQRYQAQQELPQEAYGNRSQPPMISGKP
NHEDLNLLQQERPSSLPSLCHDLPSLKEYVCGKLANRKEGTDLSGSIDDLPTGTEATHSS
AVSASGSTSSQGEQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPAS
IPGSQMPPQTPNVQSESNSHPALSQSPMPQERGFLSSIQRSSQMPQYGPQPTGPSMSPHP
SPGAPMHPGAASFQQSNSSGTYGPQMNQYAPQGNYSRPSTYSGMPNTNYSGPGPGMGMNV
NSQMHGQGPSQACGTIPVGRIPSAGMQNRPFPGHMSGMTPNSPSMTSQGGPGMGPPMPSV
NRKAQEAAAAVMQAAANSTHGRQSNFPGTSHSGMMGSSSPYSQSMNNNSNIMNPQGSPYS
MAATMVNNSAGPMGLPDMMSPGDSKHSSSLKMDGKEDLPLRPQPKPKKANSSTTTGEKIT
KLYEMGNELERKIWVDRYLSFMEERGTPVAMLPAVGKKPLDLVRLYFCVKEIGGLAQVNK
SKKWRELSTNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFATAESKKQAKI
QPPSPANSGSLQGPHTPQSTGSNSMAEMPGDLKPPTPASTPHGHMQPMPSGRNSAVSVQD
PFSDAGDAPYQKRNSMTPNTPYHQGMNMPDMMGRMPYEPNKDPFAGMRKVSGNSEPYMPS
GQMPNSGMQDMYNQAPPTAMPNMAMGQRQQYPYGPGYDRRSEHSMGPESSMGPPGQSNMP
PSNNDPSMYSPTRYPGQQRHEPYGQQYPGPGAASGQPPYGVHQPGMYPQQQNFKRHMDGM
YGPPAKRHEGDMYNMQYGNQQQEMYNQYGNTYTGPDRRPMQGQYLYPYNRERMPGSGQMP
QHPTPPQMMSGHIQPNSSESPQPSMWPTRNDMPYPYPSRQGPGVPPQSPAYPSMNRTDET
LTPDQRINHEGQWPAHVSPRQPSYMSPSTNMPPTRPPPSSYQTPPAMANHISRASSPASF
QRSLENRMSPSKPSFLPAGKMQKALPTAPLSQVAAPPPQPPPVRREITFPPGSVEATQPV
LKTRRKITSKDIVSPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGF
LELLVEYFRKCLMDIFGILKEYEVGDPSQKALGHNREKLKDSLSLAEEYEEIDYGEYEED
EDEEDEAGENKEEEMTEQDGEDEKSITTSSICDTVEKPRQASKYDKFPIKIVKKNSLYVI
DHSDRLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMDIPFHKRAAPTLNSPSKKRKDV
DDERVRESDEQTEKRIIATIDDVLSARPGALPEDSHSPCSQADNTKFLFGIHQAQSHRNF
KLLEDEPRSRDETPLCKIAHWQDSLSKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILG
KLILLHHEHPERKRAPQTYEKDEEEDKGVSCSKDEWWWDCLEVLRENSLVTLANISGQLD
LSAYTESICLPILDGLLHFMVCPSSEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDSNV
DLILATPPFSRQEKLYATLVRYIGDRKNTVCREMSVAFLSNLAQGDTLVARAVAVQKGSI
GNLISFLEDGVTIAQYQQSQHNLIHMQPPPLEPPSVDMMCRAAKALLAMARVEENRSEFL
LHEGRLLDISISTVLNSLVASVICDVLFQIGQL
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaagtggtaacggcggcggcggtggctgcggcggcagcccagacgaacaat
aaggggaagaaccctggtctgtcacccagcataagcccggagcggggccctgggaaggca
ggcatcacaatgcccgcaggagagcatggaactagcggcagcggcggagttagcggcagc
attaataacaacaacaataatggggaacaccaccatcacctccagctccaccatcaccac
ctccaacatcaccacgagcagctcagcatggccaatgcgagatctgcttccccttccagg
gaccccagctccactagcaacagtagcagcattggctcatcggatgccatggaaggaggt
agttctgctttgtcttctcctagtgctggcttggagactagtgtcctacccaaccacaag
ctgaagagtggtcgaggaggaaacgatgatggagaccagcaccctgcccaccaccagctt
caccaccacccagtccagcaccttcaccaccacagtcaccttcaccatccacatccccaa
caactccaccagcaacaccaccaccatttgcagtccctccaccgacagcagcaacacccc
taccaacaaggtggtgggcagcaggcacctgacatggacccccatcctcatggagcaggc
cgcactaaagagtgtgccacaacgggtcatctggagcagcgtaccaagccaccgactgtt
atccggggccctttggttaaggaggaagaggaggacccactgggggagctgggtagtggt
ggcggcccctactctgaacagcagcagccggtcttgacacctgtgtctggaacaggtggg
ccgcacagcaacaacaatggtactggccaccagcaccaccaaggtggcagtggccgcgct
tcctcgcacagctctggctcctcttcatcatcctcctcggactacaataaccactactat
ggtggtggcggctgcagtcctgcccctgttactggaagtagagctgttgggccttccttt
gatcaacatgttggacaacaaagccctggagtagggctgatgcagcacccagagtctggg
tcacacaactctaccaataacaccaactctcatgaggcctactctaaccacagtggcccg
gcttacaaccactacccaggaagctacccagtgcggcccagccgtggaggaggtggggct
gctcccatggaaagtagggcaggaagttatggtggctatggggtggtgggatcccctcga
catcagcaaggcagcagcacttctggtgggactcccagcagcctaaataaggctggaggc
ttccaaaggtttgcagggcagcagagccagcacccatccggggccactcctactttgaac
cagctgttgacctcccctagtcccatgatgaggagttgtggcagtggctaccctgactac
agcagcagcagtcctcatgccccccagcagcagccgccagcaggcatggggaaggacatg
ggctcaccacaatatggcaacaccggcaaccaagtctggggaggaccacagaggagccac
cctgccatgagcccaggaagctcagtacacagtcatggcagagcacagggcagtccaatg
gatccaatggttatgaagaggccgcattatgggatgggcaccaacccgtattccccggca
ccgacacagcagaataatccgtactctggccaggcatatgcaccttcagttccacagaga
tatcctgttgtaatgccaggaagaccaggtgcaataggaggaatgcagtatcccccgcaa
cagatgccgcctcagtatggtcagcaaggtgtaagtggctactgccaacagtcatattac
agccaacagccgcagccacagtacctgtcgcaggcccagcagcgttaccaagctcagcag
gaactgcctcaggaagcctatggaaacaggtcgcaacctcctatgatctcaggaaagcca
aaccacgaggatttgaacctgctgcagcaggaaaggccgtcaagcctaccgagcctttgc
catgacctgccttccctaaaagaatacgtttgtgggaaattagcaaatcgcaaggaggga
actgacttgtcgggctccattgatgatttacctacagggactgaagcaacgcacagttca
gctgttagtgcatcggggtctacaagcagtcaaggggagcaaagcaacccggcgcagtct
cctttctctccccacgcatctccacacctctccagcatccctggtggtccttcaccctct
cctgtgggctcgcctgttggaagtaaccagtctcgctctgggcctatctcgcctgcaagt
attcctggaagccaaatgccacctcagacgcctaacgtgcagtctgaatccaactcccat
cctgctctgagccagtcgccaatgccgcaagaaagaggatttctgtccagcattcagagg
tctagtcagatgccacagtatggacctcagccgacagggccttcgatgtcacctcaccca
tcccctggggctcccatgcaccctggagctgcaagttttcagcagagtaattccagtggc
acatatggaccccagatgaaccagtacgcaccgcaaggcaactactcaaggccatctaca
tacagcggtatgcccaacaccaactacagcggcccagggcctggcatggggatgaatgtg
aacagccagatgcatggccaggggccaagccaggcctgtggcactataccagtaggacgc
attccatccgccggtatgcagaaccgaccttttcctggacacatgagtggcatgacccct
aattctcccagcatgacatcgcagggaggccctggcatggggccacctatgccatctgtg
aatcgcaaggcacaggaggcagctgctgcagtaatgcaagcagcagcaaattctacgcac
ggcaggcagagcaattttcctggcaccagtcacagtggcatgatgggctccagctctccg
tacagccagtccatgaataacaactctaacataatgaacccgcaaggctccccgtacagc
atggccgcgaccatggtgaacaactctgcagggcctatgggtctgcctgacatgatgtct
cctggcgactcaaaacactcctcttcactcaaaatggatggcaaggaagacctacccctg
cgccctcaacctaagccaaagaaagccaactcgtctaccaccactggagagaagatcaca
aagctatatgagatgggcaatgagctggaacgcaagatatgggtggaccgctacttatcc
ttcatggaggagagggggacgcctgttgccatgctgcctgctgtgggaaaaaagccactg
gacttggtcaggctctacttctgtgtgaaggaaatcggaggtctagctcaggtcaataaa
agcaagaagtggcgcgagctgtcgaccaacctgaatgttggcacctcaagcagcgctgcc
agttccctgaagaagcagtacatccagtacctgttcgcttttgagtgcaagattgagcgt
ggagaggagcctccaccagaagttttcgctactgcagagtccaagaaacaggccaaaatc
cagcctccctcacctgcaaattctggctcactgcaaggcccccatactccccagtccaca
ggcagtaattccatggccgaaatgcccggtgacctgaagcccccaaccccagcgtccact
cctcatgggcacatgcaaccaatgccaagcggaagaaacagtgcggtcagtgttcaagat
cccttttctgatgcgggtgacgcgccataccaaaaacggaactctatgaccccaaacaca
ccctaccaccagggaatgaacatgccagacatgatgggaaggatgccctacgaaccgaat
aaggacccatttgctggcatgagaaaagtctctggaaatagtgagccatacatgccctct
ggccaaatgcccaacagtggaatgcaagatatgtacaaccaggctccacccacagccatg
ccaaacatggccatgggtcagcggcaacagtacccgtacggccctggctatgacagacga
tcggagcacagtatgggcccggagagcagcatggggcctcctggtcagagtaacatgccg
ccttccaataatgatccgagcatgtattcccccacccgttacccaggacagcaaaggcat
gagccgtatgggcagcagtatccaggtccaggagcagcttcgggacagcctccatatgga
gtacatcagccagggatgtacccgcagcaacaaaacttcaaacgtcacatggatggtatg
tatggccctcctgcaaaacgtcatgaaggcgacatgtacaacatgcagtatggcaatcaa
cagcaagaaatgtataaccagtatggcaacacctacactggacctgatcgaaggccgatg
caaggacaatatctctatccttacaacagggagaggatgccaggttcgggacagatgcca
caacatccaacgcccccccaaatgatgtctggacacattcaacccaacagcagtgaaagc
cctcaacccagtatgtggcctacacggaatgatatgccttatccgtatcctagcagacaa
ggtcctggtgtccctccacaatctccagcctatccatcaatgaaccgcacagatgaaaca
ttaacaccagaccagcggatcaaccatgaaggccagtggcctgctcatgtcagcccacgc
caaccttcgtacatgtctccgtcgacaaatatgccacctacccggccacctccatcttcg
taccagacacctccggcaatggcaaaccacatctctagggcttcaagtcctgcctctttc
cagcgctccttagagaaccgaatgtctccaagcaagccttcctttttgccagctggaaag
atgcaaaaggccctaccaactgctccgctctcccaagtcgctgctccgccaccacagcct
ccaccagtcaggcgagaaattacttttcctcctgggtcagtggaagcaacgcaaccggtc
ttgaaaacaaggcgaaaaattacctcaaaagatattgtgtcccctgaagcctggagagtg
atgatgtcccttaagtctggtcttttggctgaaagcacgtgggccttggacaccattaat
attcttctgtatgatgacagcactgttgctactttcaacctctcccagttatctggattt
cttgaacttctggtggaatattttagaaaatgccttatggacatttttggaattttgaag
gagtatgaagtaggagacccaagtcaaaaagcacttggccataacagggagaagttgaaa
gacagtctttccttggcagaggagtatgaagaaattgattatggagaatacgaggaggat
gaggatgaagaggacgaggcaggggagaataaggaagaagaaatgactgaacaggatggt
gaagatgagaaaagtataacaacatccagtatttgtgatacagttgaaaagccaagacaa
gccagtaaatatgacaagtttcccataaagattgttaaaaagaatagcctgtatgtcatt
gaccattctgacagacttggacgtgtacaggagtttgatagcggactcctccattggcaa
ttgggtgggggtgacacaactgaacacatccaaactcattttgagagcaaaatggatata
ccattccacaagagggcagctcctaccttgaactccccaagcaaaaagaggaaagatgta
gatgacgaaagggtgagggaatcagatgagcagacggaaaaaagaataattgcaactatt
gatgatgtcctctcagctcgacccggggcactgcctgaagactctcacagcccctgttca
caggcagacaataccaaatttctctttggaattcatcaagcccaaagtcacagaaatttt
aaactactggaggatgaacctagaagtcgagatgagactcctctgtgcaaaattgctcat
tggcaggactcgttatctaagcgctgcatttgtgtgtcaaatattgtccgtagtttgtcc
tttgtgcctggcaatgatgctgagatgtccaagcatcctggtttggtgctgatactgggg
aagcttatccttcttcatcatgagcatcctgagagaaaacgagcaccacaaacatatgag
aaggatgaagaggaggacaagggggtttcctgcagcaaggatgagtggtggtgggactgc
ctcgaagtcttgagggagaattctttggtcacattagccaacatttctgggcagctagac
ttgtctgcttatacagaaagcatctgtttgccaattttggatggcttgctacattttatg
gtatgcccgtcttctgaggcacaggatccgtttccaactgtggggcccaactcagttctg
tcacctcaaagactggtgctggaaactctgtgcaaactcagtatccaagatagcaatgtg
gaccttatcttggctactcctccattcagccggcaagaaaaactctatgctactttagtt
aggtacattggggaccgtaagaacaccgtatgcagagaaatgtctgtggcattcttatca
aaccttgctcaaggggacacattagtggcaagggcagtagctgtgcagaaaggaagcatt
ggcaacttgattagtttcctggaggacggggtcaccattgcccagtaccaacaaagccag
cataacctcatacacatgcaacctccacctctggagcctcctagtgtagacatgatgtgc
agggctgccaaggccttgctcgccatggctagagttgaagaaaatcgttctgagttcctt
ttgcatgaaggccgcttactggatatctcaatatcaactgtcctgaactctctagttgcc
tctgtgatctgtgatgtactttttcaaattggacagttatga
DBGET
integrated database retrieval system
