Pleurodeles waltl (Iberian ribbed newt): 138296177
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Entry
138296177 CDS
T10800
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03020
RNA polymerase
Brite
Enzymes [BR:
pwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138296177 (POLR1B)
Transcription machinery [BR:
pwl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
138296177 (POLR1B)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138296177
NCBI-ProteinID:
XP_069091172
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Position
5:951980496..952275017
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AA seq
1135 aa
AA seq
DB search
MEPAKKWRSLSNAPSLKHLTDPCYGLPKETQCGALQELTRAHIDSINQALGEGLSRAAQA
IPPLEFVFKNERITLAIVDAMISPPVVPKGSICRELKVYPAECRGRRSTYRGKLTADVSW
SVNGMPRGIIKQPLGFVPIMVKSKLCNLYGLSPKALIEHHEEEEEMGGYFIINGIEKVIR
MLIMPRRNFPVAMVRPKWKNRGPGYTQYGISMHCVREEHSAINMNLHYLENGTVMLNFIY
RKELFFIPLGFALKALVNLTDYHIFNELIKGREDNSFYKNCISQMLRMVMEERCTNQKQV
LSYLGERFRVKLNLPDWYTEEQAAEFLLDQCICIHLKSNTEKFYCLCLATRKLFALAKEE
CTEENPDSLMNQEVLTPGRLYLMFLKEQMEAWLLSVRLALEKKSQKSTITITSDNLMRVF
SMGKDITRYSEYLLATGNLRSKTGLGMLQDTGLSVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTMVRRLLPESWGFMCPVHTPDGEPCGLMNHMTVICEIVTRTTNTVALTALLCSLGVT
PVDGTPGRQYSDCYPVVLDGAMVGWVEKDLAPAVADSLRTFKVMQEKKVSPWMEVVLIPM
TGKAGLYPGLFLFSTPCRMVRPVQNLTLGREEMIGTLEQVFMNIAIFEGDIVPGTTTHQE
LFPHSMMSVVANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYAMDNYPVGTNAIVAVISYTGYDMEDAMVLNKSSWERGFAHGSVYKTEQID
LSEKVKQGDDSLVFGVKAGDPRVMNKLDDDGLPFIGSVLQYGNPYYSYLNLNTGENFVVY
YKSTESCVVDNIKVCSNDNGSGKFKSICITMRIPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCIKCGSLLSPL
LEKPPPSWSAMRHRKYNCTLCDRSDTIDTISVPYVFRYFVAELAAMNIKVTLDVK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagccagcaaaaaagtggcggagtctgtctaacgctcccagtttaaagcacctcacc
gacccatgctatgggctgccgaaggaaacccagtgcggggccctgcaggagctgacccgc
gcacacatcgattccatcaaccaggcgctgggagaaggtcttagccgcgcggcacaggcg
ataccacctctggagtttgttttcaagaatgagcgtattacattggctattgttgatgcc
atgatcagccctccagttgtaccgaaagggagtatttgcagagagctgaaggtgtaccct
gctgagtgcagaggccgcagaagcacctatcgcgggaagctcacagctgacgtcagctgg
tctgtgaatggtatgcctcgtggaataattaagcagcccttaggttttgttccaatcatg
gtaaagtcaaaactctgcaatctttatggcctttctcctaaggctcttatcgaacatcat
gaggaggaagaggaaatgggtggatattttataatcaacggaattgaaaaagttatccga
atgctgatcatgcctaggagaaacttccctgttgcgatggtgaggccaaaatggaaaaat
cgtggaccaggttacacccagtatggtatttcgatgcattgcgtgagagaggagcattct
gcgattaacatgaaccttcactatcttgaaaatggcacagtgatgttgaacttcatctat
cgcaaggagcttttctttattccactgggctttgctctcaaagcgttggttaatttaaca
gactaccacattttcaacgagctcatcaaaggaagagaagacaactccttctataaaaac
tgcatctcacagatgttaaggatggtaatggaggaacggtgcacaaaccaaaagcaggtg
ttaagctatctgggggagcgcttcagagttaaactcaacttgccggattggtacactgag
gaacaggctgcagaattcctcttggaccaatgcatatgcatacatcttaaatcaaacacc
gagaagttctactgcctttgcttagcaacccgtaagttgtttgcccttgccaaggaagag
tgtactgaagaaaacccagacagcttgatgaatcaagaggtgctaacgcccggacgtttg
tatcttatgtttttaaaggaacagatggaagcctggttgttgtctgtgaggttagcctta
gaaaagaagtctcagaagagcacaatcaccatcacgtctgataatctcatgagggtgttc
agtatgggaaaagacattacaagatacagcgaatatcttcttgcaactggaaatcttcgc
tcaaaaacaggtctgggtatgctgcaggacactggtctgtcggtggtggctgacaaactg
aactttatccgctacctctcccatttccgctgtgtacacagaggggctgcgtttgctaag
atgagaactaccatggtgcgacggttgctgccagagtcctgggggttcatgtgtccagtc
catacgcctgatggagagccctgcggcctgatgaaccacatgacagtcatctgtgaaata
gtgacacggacaacgaacacagttgccttgactgctctgctatgttccttaggggtcact
cctgttgatggaacaccaggccgtcaatactctgactgctatcctgttgttctggatgga
gccatggtaggctgggtggagaaagacctagcacctgctgttgcagattcccttcgcacc
ttcaaggtaatgcaagaaaaaaaagtgtcaccatggatggaggtggttctcatcccaatg
actgggaaagcaggtctgtacccaggattattccttttcagtaccccatgcaggatggtg
cggcctgtgcaaaacctcacccttggaagagaagaaatgattggcaccttggaacaggtt
ttcatgaacattgctatcttcgaaggagatattgtaccaggaactaccacccaccaagaa
ctttttcctcacagcatgatgagtgtagtggctaatttcatccctttttcggaccacaac
cagagtcccagaaacatgtaccagtgccagatgggaaagcaaaccatgggattcccactg
ctaacttaccaagaccgatcagataacaaactctaccgtcttcagactcctcagagtccc
ctggtccggccatacatgtatgattactatgctatggacaattatccagttggtaccaat
gctattgtagcagttatctcttacacaggctacgatatggaagatgccatggtgttaaat
aaatcctcttgggagcggggttttgctcatggaagtgtctacaagacagagcagatagac
ctcagcgagaaggtcaaacaaggagatgacagcttagtctttggagtcaaagctggtgat
cccagagtgatgaacaagcttgatgacgatggtcttccattcattggatctgtcctgcag
tatggaaacccgtattacagctacctgaatctcaatacaggggagaactttgtggtgtac
tataagagcacggaaagctgtgttgtggataacattaaagtatgcagcaatgacaacggg
agcggaaagttcaaaagcatctgcattaccatgaggatccctcgcaatccaaccattgga
gacaagtttgcaagtagacatgggcagaagggtattttgagccgcctgtggcctgcagaa
gatatgccttttacagaaagtggcatggtaccagacattcttttcaaccctcatggtttc
ccctcccgaatgactattggaatgctgattgagagcatggcgggaaaatctgctgcactg
catggactctgtcacgatgccactcccttcaccttttcagaagaaaactctgccctggaa
tactttggtgaaatgctgaaggctgctggctataacttttatggcacagagagattgtac
agtgggatcagtgggcttgaactcgaagctgacatttttatcggcgttgtttactatcag
cgtttacgtcacatggtctctgacaagttccaagtgagaacaactggagcccgggataaa
gtcaccaaccagcccatcggtggacgaaatgttcaaggtgggataagatttggtgagatg
gaacgggatgctctgctggctcatggtacttccttcttgctccacgaccggctctttaac
tgctcagaccggtctgtggcgcacgtgtgcatcaagtgtggcagcctgctctctcctctg
ctggagaagcctcctccttcctggtcggccatgcgtcacagaaaatacaactgcaccctg
tgtgaccgaagtgataccattgacacaatctctgtaccttatgtcttccgctatttcgtt
gctgaactagctgccatgaatataaaagtgacacttgatgtaaaatag
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