Pleurodeles waltl (Iberian ribbed newt): 138296435
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Entry
138296435 CDS
T10800
Name
(RefSeq) desmin-like isoform X1
KO
K07610
desmin
Organism
pwl
Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04519
Cadherin signaling
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138296435
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138296435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138296435
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
138296435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF3450
DUF8221
Taxilin
CLIP1
GAS
Baculo_PEP_C
CENP-Q
SPC25_N
DUF4164
Phage_scaffold
TPR_MLP1_2
Tuftelin_like
WXG100
ZK652
CCDC122
Bap31_Bap29_C
CCDC39
CCDC89
DUF7603
CEP89
TMF_TATA_bd
Plectin_PPL
Hormone_1
CLZ
FKBP15
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
138296435
NCBI-ProteinID:
XP_069091652
LinkDB
All DBs
Position
5:1309939072..1309988245
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AA seq
458 aa
AA seq
DB search
MSRSPERMSSYRRHFEDFSSSSVVRLRVCSPSPPRRPRSASFGRSSRGQSLASAPRASRR
STAGSRRPFSASMANLCFGPALGAVVDLEAASAANQEFLSTRISEKREMVGLNDRLAKYI
EKARDLEQQNKSLEAEIETLQNRYTRPSGLRALYEEQLRDLHRTAEQIKVQRDMSLAAKT
GVADQLESIKKRFEDAVEERKKAEKDIDAFRPDVDAATAGRITLEKQLESLEAEIVFLQR
VHTEEIEDLMQQIYSATTSVDIAFSIPDLAASLRDIQSEYEGIAAKNLQEVDEWYKTKFV
DFNQASTKHAENVRRFREEMGDCKRSIKCKELELEALKNKNAALEAQIKDAQEKNNVEIE
ELQDKIKKLQEDLKTMKEKIALHLREYQSLLNVKMALDVEIATYRKLIEGEDSRLSTSVS
AHHLLSRMTGCHGEASTIQSISKEQALEVTERKTLLIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcccggagaggatgtcttcgtaccgccggcacttcgaggacttcagcagc
tcctcggtggtgaggctgagggtgtgcagcccgtccccgccgcgccggccgcgctcggcc
agcttcggccgcagcagcagggggcagagtctggcctcagcgccccgggcgagcaggagg
agcaccgccggcagccgaagacccttcagcgccagcatggcaaatctatgctttgggccg
gccttgggggcagtagtggatctggaagcagccagtgcagcaaaccaggaattcctcagc
acaaggatcagtgaaaagcgtgagatggtcggcctgaacgacagactggctaagtacatt
gagaaggcacgcgatttagagcagcagaacaaatcactcgaggcggagatcgaaaccctt
caaaaccgttacacgcggccttctggactgcgggccctgtacgaggagcagctgagagac
ctccacagaaccgccgagcagataaaagttcaaagggacatgtccttggcggcaaaaact
ggagtggcagatcagctggaatcaataaagaagcggtttgaagacgcggtggaggagcgg
aagaaggctgagaaagacattgacgctttccgccctgacgtggacgccgccacagctgga
cgcatcaccctggagaagcagctggagagcttggaagcagaaattgtgtttctgcaaaga
gttcacactgaggagatcgaggacttgatgcagcagatatacagcgccaccaccagcgtg
gacatcgctttctccatcccagacctggctgcctctctgagggacattcagtcggagtac
gaagggattgccgccaagaacctgcaggaggtagacgagtggtacaaaaccaaatttgtg
gacttcaatcaagcttccacgaaacacgcggagaacgtgagacgtttcagggaagaaatg
ggagactgcaaaagaagtattaagtgtaaagagctggaactggaagcccttaaaaataaa
aatgcagctttggaagcccaaattaaagatgctcaggaaaagaacaatgttgaaattgaa
gaactacaggataaaattaagaaactccaggaggacttgaaaacaatgaaagagaaaatt
gcccttcatctacgtgaataccaaagtctgcttaatgtgaaaatggcattggatgttgag
atcgccacctacaggaagctgattgaaggcgaagacagtcgtctctccacctccgttagt
gcacatcaccttttgagcagaatgacaggatgtcatggagaggccagcaccattcagagt
atctccaaagagcaagctctggaggtaactgaaagaaaaactctcctcatcagttaa
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