Pleurodeles waltl (Iberian ribbed newt): 138296597
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Entry
138296597 CDS
T10800
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138296597 (RNF180)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138296597 (RNF180)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138296597 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
138296597
NCBI-ProteinID:
XP_069092031
LinkDB
All DBs
Position
1_1:354840067..355100795
Genome browser
AA seq
333 aa
AA seq
DB search
MDLSSQQWRTLLLAVGSQGLEQPPHAPQDPTVTPGIQKRTKDLDVQMIIPPQRNIQLQCL
KTHTEKNKCNIFETRMKKSENKKLKFVMVDEAIFVEHKLFGVQCIKCNCPQKRSLKYSAM
QTETWTFNNSSRLPVFSLADNDALLGSCETSNSNLSTDDENDNSREKESHICAVCLDVFF
NPYMCYPCHHIFCEPCLRTLAKDNPSSTPCPLCRTTITKVLFQTALNKSTIAFFPNEYFK
RKHSFQRTSCARWPLPCCEKVFRVFGGFSRLRDPFTRRQFPHSTHRLDSTDFEDNSHWWR
FDVDVLIIYIFSVNWVIGFIIFCFLLYFFFPSF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtcgagccaacagtggaggacgcttcttctcgcagttggcagtcaaggcttg
gaacaacctccccatgcacctcaggaccccaccgtcactccagggattcagaagagaact
aaagacctggatgttcaaatgatcattcctccacagagaaacatacagctccagtgcctc
aagacccacacagaaaaaaataagtgtaatatatttgaaaccagaatgaaaaagagcgag
aacaaaaaactaaagttcgtcatggtggatgaagctatatttgttgagcacaaattgttt
ggagtccaatgtatcaaatgcaactgtcctcaaaaaagatcattaaaatattctgccatg
cagactgaaacatggactttcaacaacagcagcagactgccagttttctccctggcggac
aatgatgcacttctcggtagttgtgagacatcgaactcaaacttaagtacggatgatgag
aacgacaacagcagagagaaagaaagccacatttgtgctgtgtgccttgatgttttcttc
aatccatacatgtgctatccctgccatcacattttttgtgaaccctgcctacggacactt
gccaaagacaacccttcaagcactccctgtcccctctgtcgtacaaccattacaaaagtc
cttttccagacagcactgaacaaatctaccatagcatttttccccaatgaatatttcaaa
agaaagcatagctttcagagaacaagttgtgcaaggtggccgttaccctgctgtgaaaaa
gtattccgcgtttttggaggtttcagcagactgagagatccctttacaagaaggcaattc
ccacatagtacacacagactggattccacagactttgaggataacagccattggtggcga
tttgatgtggacgtgttgatcatctacattttctctgtcaactgggttattggattcatc
attttctgctttctcctctatttttttttcccttcgttttag
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