Pleurodeles waltl (Iberian ribbed newt): 138296607
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Entry
138296607 CDS
T10800
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138296607 (YTHDC1)
Spliceosome [BR:
pwl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138296607 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
138296607
NCBI-ProteinID:
XP_069092012
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Position
1_2:40623377..40932033
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AA seq
745 aa
AA seq
DB search
MADDSRDEKGRLPTEMRMALQVLDDALRFAKEDGEHNVLDDILTEAPDHDDELYNPESEQ
DVNEKKAAKRKSERSESMEIKRQRPSAHSSRQPPQRSVSSSASNSGRRSSSTKGKHVVEY
KRDEFHRPERSKHADSDRKSRVANTSSREPYKSHPDKSGSRKREADRRTKSITPDGSSEQ
QNRQDMERRTSRSSHSSKAGDSDDYGSDQDSGSSGSSDDDPGSNNENEEGMEDENGDEDD
DGEEAQYVQEREQREGNDYDTRSEATDSDSDSGSFTDGDSVRSGSGSDLSDQKKKERKRA
RSISPIVFDRSGSSASESYAGSVKKHEKLSSSVRAVEKDQTSKLKYIIQDARFFLIKSNN
HENVSLSKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGHFQGFARLSSESHHGGS
PIHWVLPPGMNAKMLGGVFKIDWICRRELPFTKSSHLSNPWNENKPVKIGRDGQEIENVC
GTQLCLLFPPDESIDLYPVIHKLRHKRRANSQPRTRGRPSRREPVRDVGRRRPEEYDIHN
RKKPRIDYPPDFHQRPGYVKDPRYQEVDRRFTGVRRDVFLNGSYNDYVREFQNMGPPPPW
QGMPPYPGMEQPQHHPYYQHHAPPPQAHPPYSAHHPVQHDARYRDKRVVQGGHSRQHEDF
HFNSSQYAKQHDYDMRVDDFLRRTQAVVSGRRSRPRERERERERERPRERENRRERERDR
GRDRERERERIRDRERDRDRGRYRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcagggatgagaagggcaggttaccgacagagatgcggatggccttg
caggtgctggatgacgcccttcgcttcgcaaaggaagatggtgaacacaatgtcttggat
gacattttgactgaagctcctgatcatgatgatgagttgtacaacccggaaagtgaacag
gatgtgaatgagaaaaaagcagccaaaagaaaaagtgagagatctgaatcaatggaaatc
aagaggcagagaccctctgcacactcgtcaaggcaaccacctcagagatcggtcagttcg
tcggctagcaacagtggaaggcgaagctccagtactaaagggaagcatgtcgttgaatat
aaacgtgatgagtttcatcggcctgaaaggagtaagcatgctgatagtgacaggaagagc
cgtgttgcaaatactagttccagagaaccctataaaagtcatcccgacaagagtggctca
agaaaacgcgaagcagatagaaggaccaagtccatcacaccagatggatcatctgagcag
cagaacaggcaggatatggagagaaggacaagtcggtcaagccattcctccaaagcagga
gattcagatgattatggttcagaccaagattctggcagcagtggatcatctgatgacgat
ccaggaagcaataatgagaatgaagaaggaatggaagacgaaaatggggatgaagatgat
gatggtgaagaggcccaatatgtgcaagagagagagcagagggaggggaatgactatgat
actagaagtgaagcaacagattctgactccgattctggatctttcacagatggagattca
gtccggtccggctcaggatcagatctttctgatcagaaaaagaaggaaaggaaaagggct
agatctatttctccaattgtgtttgatagaagtggaagttctgcatcagaatcctatgca
ggttcagtaaagaagcatgaaaagttatcctcatctgttcgtgctgtcgaaaaagaccag
accagtaagctgaaatatataattcaagatgcaagattttttctcatcaagagtaataac
catgagaacgtatctctgtccaaagctaagggcgtctggtcaactttgccagtaaatgag
aagaaattaaatgctgccttcagatcggcaagaagtgtgattttgatattttctgtgagg
gaaagcggtcactttcaaggatttgcaagactctcgtctgaatcacatcatggtggctca
cccattcactgggtactgccaccgggtatgaatgcaaagatgctcggaggtgtttttaaa
atagactggatttgcaggcgagaattgcccttcaccaaatcctctcaccttagcaatcct
tggaatgagaataaaccagtgaagataggacgtgatggacaggaaattgaaaatgtatgt
ggaacccagctttgccttcttttccctcccgatgaaagtattgacttgtatccggtcatt
cataaattgcgtcataaaagaagggctaattctcaaccacgaacaagaggccgtccttca
cgtcgtgaaccagtgcgggacgtgggaaggcgtcgacccgaagagtacgatatccataac
cgaaagaaaccaaggattgactacccccctgactttcaccagaggccagggtatgtcaag
gatcctcgatatcaagaagtagacaggcgatttactggagtccgacgagatgtgttcctg
aatgggtcttacaatgattatgtgagggaatttcagaacatgggaccacctccaccgtgg
caaggaatgcctccatatcctggaatggaacagccacaacatcatccatactatcaacat
catgcaccaccacctcaggctcacccaccttattctgcgcaccatccagtacagcatgat
gcaagatacagagacaagcgagtcgtacagggtggccacagcaggcaacatgaagatttc
catttcaacagctcacagtatgccaaacagcatgactatgacatgagagtggatgacttt
ttacggcgtactcaagctgtcgtaagtggaagaaggagccgacctcgggaaagagaacgg
gagcgagagcgtgaacgtcccagagaacgggagaaccggagagagagagaacgcgacagg
ggacgtgacagagaaagagaacgagagcggataagggacagggagagagatagagacagg
ggaagatacagaagataa
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