Pleurodeles waltl (Iberian ribbed newt): 138296634
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Entry
138296634 CDS
T10800
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138296634 (DDX1)
Spliceosome [BR:
pwl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138296634 (DDX1)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138296634 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138296634
NCBI-ProteinID:
XP_069092064
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Position
5:1632866922..1633059862
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AA seq
739 aa
AA seq
DB search
MAAYGELGVMPEIAKAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDHQEGKKGKTTVKTGATVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATRGINKGKYYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTVGCYLDIEKSSIKFSKNGKDLGLAFDIPSHLKNQAFFPSCVLKNAELKF
NFGEEDFKFPPKDGFVAICKASDGHVVKSQHSGSAQVAQTKNLPNAPKALIIEPSRELAE
QTLNNIKQFKKHVTDPKLRELLIIGGVAAKDQLSVLEQGVDIVVGTPGRVDDLVSTGKLN
LSQVRFLVLDEADGLLTQGYSDFINRIHGQIPQITSDGKRLQVIVCSATLHSFDVKKLAE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKNDKVWERLKSHIRTDEVHAKDNTRPGTNS
AEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEEYFIQQGGGPDRKGHQFS
CVCLHGDRKPQERKQNLEKFKKAEVRFLICTDVAARGIDIRGVPYVINVTLPDEKQNYVH
RIGRVGRAERMGLAISLVASEKEKVWYHTCSSRGKSCFNTRLKDDGGCTIWYNEMQLLSE
VEEHLTCTITQVEPDIKVPVDDFDGKVVYGQRRAAGGGQYKGHVDILAPTVQELAALEKE
AQTSFLQLGYLSNQLFRAF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttacggagagttgggtgtgatgcctgaaatagccaaggcggtggaggagatg
gattggcttctccccacagacatccaggctgagtcgattcctctaattttaggtggtgga
gatgtgctaatggcagcagaaaccggcagtggaaaaactggcgcattcagtataccagtc
attcagattgtttatgaaactctaaaggatcatcaagaaggaaaaaaaggaaaaaccaca
gtaaagacaggcgcgacagtgctgaataagtggcagatgaatccatatgacagaggatct
gcatttgcaatcggctctgatgggttgtgttgtcaaagtcgggaaataaaggaatggcat
gggtgcagggccaccagaggaataaataaaggaaaatactactatgaggtatcttgccat
gatcagggattgtgcagagttggatggtcatccatgcaggcttctttggacctaggaact
gacaaatttggatttggctttggtggaactggaaaaaagtctcacaacaaacaatttgac
agttatggggaggaattcactatgcatgatactgttggatgctatctggatattgaaaaa
agcagcatcaagttttcaaaaaatgggaaagacttgggtctagcgtttgacattccgtca
catttgaaaaaccaggcattttttccatcttgtgttttgaagaatgctgaactgaaattc
aattttggagaagaagattttaagttcccaccaaaagacggttttgttgcaatctgcaag
gcttctgatggccatgttgttaaatctcagcactctgggagtgctcaagtagctcagact
aagaatcttccaaatgcacccaaagctttaattattgaaccatccagagaactggcagag
cagactttgaacaacatcaagcaatttaaaaaacatgtcactgatcctaaactcagggag
cttttgataattggtggtgttgctgcaaaagaccaactatctgttctggaacaaggtgtt
gatatagttgtggggaccccaggaagagtggacgatctagtgtcgactggaaagctaaac
ttgtcacaagtcagattcctagtccttgatgaagctgatggcctccttacccaaggttat
tcagatttcataaacaggattcatggtcagattccacagattacgtcagatggaaaacga
ctgcaggtgatagtgtgctctgcaaccctacattcctttgacgtgaaaaagctagctgag
aagataatgcatttcccgacatgggtggatctgaaaggagaagattctgtccctgaaact
gtgcaccatgttgttgtgcctgtcaaccccaaaaatgacaaggtttgggagagattgaaa
tcccatattcggactgatgaagttcatgctaaagataatacaagacctggcactaattct
gcagagatgtggtcagaagctatcaaaatcctgaagggtgaatatactgtgcgtgcaatc
aaagaacacaaaatggaccaggcaattattttctgcagaactaaaattgactgcgataac
atggaagaatactttatccaacaaggaggaggcccagatagaaaagggcaccaattttcc
tgtgtgtgcctgcatggggatagaaaacctcaggaaagaaaacaaaacctggaaaaattt
aagaaagctgaagtgagattcctaatctgcaccgatgtggctgccagagggattgatatc
cgaggtgttccatatgttataaatgtaactcttcctgatgaaaaacaaaactatgtgcat
cgcattggacgagttggtagagctgaaagaatggggttagctatatcccttgtggcttcg
gaaaaagagaaggtgtggtaccatacatgcagtagccgtggaaagagttgcttcaataca
agactgaaggacgacggaggatgcactatttggtataatgaaatgcagctgctctctgag
gtcgaagaacacttaacatgcacaataacccaggtggaaccagatataaaggtgcctgta
gatgactttgatggcaaggttgtttatgggcaaagaagagctgctggcggaggacagtat
aaaggacatgtggatattttggcacctaccgtacaagaactggctgccctcgaaaaggag
gctcagacatctttcttgcaacttggctatctttctaaccagttgtttagggctttctga
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