KEGG   Pleurodeles waltl (Iberian ribbed newt): 138296780
Entry
138296780         CDS       T10800                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    138296780 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pwl03009]
    138296780 (WDR43)
Ribosome biogenesis [BR:pwl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    138296780 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Utp12 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_HPS5 WD40_like Beta-prop_ACSF4 Beta-prop_RIG_1st Beta-prop_DCAF4 DUF2415
Other DBs
NCBI-GeneID: 138296780
NCBI-ProteinID: XP_069092310
LinkDB
Position
5:complement(1771716578..1772179352)
AA seq 661 aa
MAADSSDPLSTGPCFAFSPGGGRDLLALSSADGRVRVWETRTGSLRQEYVPSAHLSAACT
CLCWSPAGRPGADKEGPQKKKRKSEAAESTGQFDLLAIGTAVGSILLYSVVKGELQSKLV
SGHESKVNCIRWHRNNGCLYSCSDDKHIIEWNSHTCKVKCKWKGDNSSVNCLCISPDGKM
LLSAGRTIKLWDLETKEVYRQFTGHSTGVTSLIFTTVRPPNESQPFDGITGLYFLSAAKH
DRLLSVWQVRSEVKEKNAILSFRLPEEPVFIDLTVPESKEEPVKLAVVCRNGELHFFEHV
FNGYCKKPLSSNSVVEIATSGKDGDSTPKPVSVLSAAFCADKQSLVLVYGSTIHPVMERL
TPNSSEPRRCLIRDIQKTLSLRTETTATKVKTPLVSSEAKRLTPGFPGHSASIKPGSSVP
EKAESKRKKGDIKEASIEERLGAMDIDIGNIKTKGGLPQTDSFAVLLVQGLESSDSDILN
KVFQTKKDTLIKNTVARLPVYAVIPLLHELTKRLQGHPYSAILMVRWIKAVFTLHASYLT
TLPDLIPKLGTLYQLMENRIKMLQKLSRFHGKLFLLITQVAASEKTQASADINQTAKLVY
EEESSEEESDDEMVAEKDSDDNWVEEEDDVEHEEQSDNDQDMHIDKGINGDSDPGNESEE
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggcggctgatagcagcgaccctctctcgacagggccctgcttcgccttcagcccaggc
ggcgggcgggacctgctggccctgtcctcggcggacggccgggtgcgagtttgggagacg
cgcaccggctccctgcgacaggaatatgtgccctccgctcacctcagcgccgcctgtacc
tgcctgtgctggtcacccgcgggcaggccgggggccgacaaggagggcccacaaaagaag
aaaaggaaatctgaagccgcagagtcgactggacagtttgatttgttggctattggtaca
gcagtcggcagcattttattatatagtgttgtaaaaggagaactgcagagcaagttggta
agtggccatgaaagtaaagtaaactgtatacggtggcaccggaacaatggttgcttatac
agttgttcagacgacaaacacatcatcgaatggaattcacatacatgcaaagtcaaatgc
aaatggaaaggcgataacagtagtgtcaactgtttgtgtatcagtccagatggaaaaatg
ttgctttcggctggtcgaaccattaagctgtgggatttggagaccaaagaagtctacaga
caattcacaggccattcgacgggcgtcacatcacttatcttcacaacagtacgacctcca
aatgaaagtcagccctttgatggaatcacaggtctctattttttgtcagcagccaagcat
gaccggttactcagtgtatggcaagtgagatcggaggtgaaagagaaaaatgccatctta
tccttcagacttccagaagagccagtttttattgacttgactgtaccagagagcaaagag
gagcctgtgaagttagccgtggtgtgcaggaatggagaactacatttctttgagcacgtt
ttcaatgggtattgcaaaaagcctctctcgtcaaactctgtagttgagatagcaacatca
gggaaagatggcgactccacaccaaaaccagtgtctgttctatcagcagcattctgtgca
gacaaacagtcattagtgcttgtatatggcagcacaatacatccagtcatggagagattg
acaccaaattcaagtgagcctcgccgatgtttaataagggacattcaaaaaacattatcg
ctcagaacagaaaccacagcaacaaaggttaaaacgccacttgtcagttcagaagccaaa
agacttactcctggatttcctggtcatagtgcgtctataaaacctggatcatctgtacca
gaaaaagcagaaagcaagaggaaaaaaggtgacatcaaagaggcgagcattgaagagcga
cttggtgcaatggacatagacattggtaacataaagacgaaaggtggcctcccacagact
gatagctttgcagttcttttggttcagggactggaaagcagtgattcagacatcctaaat
aaagtgttccagactaagaaagatacacttataaagaacacagttgcccgattacctgta
tatgcagttattccgctgctgcatgagctcacaaagaggttacaaggacacccatatagt
gccattctcatggtccggtggataaaggctgtcttcacactgcatgcttcataccttaca
acattaccagacctaatcccaaagcttggaacattataccagttaatggaaaacagaatt
aaaatgcttcaaaagctgtcccggtttcatggaaaactatttcttctaattacacaggtt
gcagcatctgagaaaacgcaagcatcggctgatataaatcaaactgctaaattagtgtat
gaagaagagtcttctgaggaagaatccgatgatgaaatggttgcagagaaagattccgac
gacaactgggtggaagaagaggatgatgtggaacacgaagaacaatctgacaatgaccaa
gacatgcatattgacaaaggaatcaatggggattctgatccaggaaatgaaagcgaagaa
gagtaa

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