Pleurodeles waltl (Iberian ribbed newt): 138297024
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Entry
138297024 CDS
T10800
Symbol
LHCGR
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04020
Calcium signaling pathway
pwl04080
Neuroactive ligand-receptor interaction
pwl04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
138297024 (LHCGR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138297024 (LHCGR)
04081 Hormone signaling
138297024 (LHCGR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pwl04030
]
138297024 (LHCGR)
G protein-coupled receptors [BR:
pwl04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
138297024 (LHCGR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
Fusion_F0
Motif
Other DBs
NCBI-GeneID:
138297024
NCBI-ProteinID:
XP_069092644
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Position
5:complement(303312724..304149118)
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AA seq
679 aa
AA seq
DB search
MSLGTTKSFTHVSVKVIPSRVFKGISEDIATILISESDSIEKIEVNAFEDLPNLTELLIR
NTKHLVHIENGAFSNLPRLKFLSICNTGIRVFPDVTKVFSTQLNFILEVYDNLHVTTIPS
NAFQGMNSEPLTLKLFRNGFVDIKTHAFNGTKVDQLFLNDNHNLGIMHNDVFKGASGPNR
LDISSTALEFLPSYGLEPIQVLVAESSYSLKKLPPLDRFVHLVEARLTYPSHCCAFRNMR
MKEPNSLLLLFENFTKQCDNPLRTYTNDTLLEEFLNISSWNEEQNTSLTLTSSNLDDEIP
ADYDYICNPKKLTCIPEPDAFNPCEDIMGYDFLRIMIWFISILAIAGNAVVLIVLLTSHY
KLTVPRFLMCNLSFADFCMGLYLLLIASVDSQTKNQYYNHAIDWQTGSGCSAAGFFTVFS
SELSVYTLTVITLERWHTITYAMQLDRKIRLRHAIIIMFGGWLFSLLIALLPLLGISNYI
KVSICLPMDIETTLSQTYIIITLVLNVVAFIIICACYIKIYIAVQNPELAPTNQDTKIAK
KMAVLIFTDFTCMAPISFFAISAAFKVPLITVTNSKILLVLFYPVNSCANPFLYAIFTKA
FRRDFFLLMSRFGCCKTQAELYRVNNFSAYTSNCKIDHSCGGSKKTSRADIRLTTFDCQY
STVTRATIKDEYNYGNSES
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaggcaccacaaagtcttttacgcacgtttctgtcaaagtaattccatcaaga
gtgtttaaaggaataagtgaggatatcgcaacgatattaatctctgagagtgattctata
gaaaaaatagaagttaatgcttttgaagaccttccaaacctgactgaactactaatccgg
aacacaaaacatttggtgcacattgaaaatggagcattttcaaatctcccgcggttaaaa
ttcttgagtatatgcaacacaggaataagagtatttccagatgtaacaaaggtgttctca
actcaactcaacttcattttagaggtatatgataacttacatgtaacaacaataccatca
aatgctttccaaggaatgaacagtgaacctctgaccttgaaactgttcagaaacggattt
gtagatataaaaactcatgcattcaatgggacaaaggtggatcaactgtttcttaatgac
aatcacaaccttggaataatgcacaatgatgtcttcaagggtgcttcaggaccaaatcgt
ttggacatctcttcaacagcactggagtttttacctagctatggactagagccgattcaa
gtgttagttgctgaatcatcctactccctgaagaagctgccacctttggacagatttgtt
catcttgtagaggccagattaacatatccaagccactgctgtgcttttagaaacatgaga
atgaaagaaccaaacagtcttcttttgttatttgagaattttaccaagcaatgtgacaac
cctctgagaacgtatactaatgacacactgcttgaggagtttttaaacatttcctcatgg
aatgaagagcagaatacatccctaactttaacatcaagtaacctcgatgacgagattcct
gcggattatgactacatttgtaatcctaaaaagcttacatgcattccagagccagatgct
tttaatccttgtgaagatatcatgggatacgactttcttcggatcatgatttggttcatt
agtatccttgccattgctggaaatgcagttgtcctaatcgttttgctaacaagtcattac
aaactcacagtaccacgttttctaatgtgcaatttatcttttgcagatttttgcatggga
ctttatttgttgcttattgcctcagttgactctcaaacaaaaaaccagtactataaccat
gcaattgattggcaaacaggtagtgggtgcagtgctgctggctttttcacggttttctct
agtgaactctcagtttataccttgactgttattactttagaacgatggcatacaatcact
tatgcaatgcagttagatcgaaaaatcagattaaggcatgctataattattatgttcggg
ggttggttattttctctcttaattgcactgctgcccctgttaggcatcagcaattacatt
aaagtcagcatatgcctgcctatggatatagaaaccactctgtcacagacctacattatt
attactttagtccttaatgttgttgcttttatcattatttgtgcatgttacataaaaatt
tacattgcagttcaaaatccagagctggcacctacaaatcaagatacaaaaattgcaaaa
aaaatggctgtgctgatcttcactgactttacatgtatggcaccaatatcattctttgcc
atatcagccgcttttaaagtacctctcatcactgtgacaaactctaaaattttacttgtt
ctgttttatccagtgaactcttgtgcaaacccgtttttatacgcaatttttacaaaagca
tttcgaagagatttctttcttttgatgagcaggtttggttgttgcaaaacccaggcagaa
ctttacagagtaaacaatttttcggcctacacctccaactgcaagattgatcactcatgt
ggtggatcaaaaaaaacttctcgagcagatattcgtctgacaactttcgactgtcagtac
tccacagtcacaagagcaactataaaggatgaatataactacggaaacagtgaatcatag
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