Pleurodeles waltl (Iberian ribbed newt): 138297423
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Entry
138297423 CDS
T10800
Symbol
PTCHD4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
138297423 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
Other domain-containing proteins
Patched domain-containing proteins
138297423 (PTCHD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
138297423
NCBI-ProteinID:
XP_069092883
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All DBs
Position
5:1702555152..1702888737
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AA seq
904 aa
AA seq
DB search
MYFFRRSGVYASRIRRRMLQQAVHRGLAASFYNLGLFVSRHPVFFLTVPSALSLIFGLLL
LHRFRTEADLETLLAPTHSLAKTERSLASSLFPLDQSKARLYSALHTPGRYGRVIVASKP
GGNILLQAEQVLQVHRSVLDMKVNYMGYNYTFSHLCMLGDEDRKCVLDDIVSVMEGLRQA
ALSNRTTTRLQVSYPSTRLKDGRQSFIGHQLGGVSEVPNSKDQRVKSARAVQLTYYLQTY
GSATQDTISEIWENGFCNLMQKLQKNHTDIQLFSLTSFSLMRDFQKTISLAHTKILVSLM
LVLMSATLSSSMKDCLRSKPFLGLLGVLTICISTVTAAGIFFVTDGKYNSTLLGIPFFAM
GHGTKGVFELLSGWRRTRETLPFKDRVAGAYSDVMVSYTMTSSLYIITFGMGASPFTNIE
AVKIFCQNMCITILLNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSEDYLDRQPIWF
QTMMSDGHQHSSHHEPDPYENHFIHHFLREHYNEWITNTYVKPFVVILYLIYASFSFMGC
LQISGGSNIINLVASYSPSVSYAASQQKYFSNYSPVIGFYIYEPLEYWNATVQEDLKTIS
HGFNTESWIEQYYQYLKTVNISASNKTDFIATLQNSFLKKTEFQHFKNDIIISKSGDDIN
IVASRMYLVAKTSENTQREVVELLEKLRPLSLIQSIKFIVFNPTFVFMDHYSLTVTMPVL
ISGFSVLLALILTFFLVIHPLGNVWVIVTVTSIELGVLGLMTLWNVDLDCVSTMCLIYSL
NFSIDHCAPLLYTFVLATEHTRTLCIQDSLMEHGTAIFQNITSFLIGLIPLLFVPSNLTY
TLFKCLMLTGSCTLLHCFVILPVFLTFFPPSKKRHKKKRRAKRKEREEIECIEIHENPEP
VTAI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtactttttccggcgctccggagtgtacgccagcaggattcggagaaggatgctgcaa
caagcagtccacagagggctcgctgcgtccttctacaacctgggcttgttcgtcagcagg
caccccgtcttcttcctcactgtgccatcggcgctcagcctcatcttcggcttgctactg
ctgcaccgattcaggacagaggccgacctagagaccctgctggcgcccacccacagcctg
gccaagaccgagaggagcctggccagcagcctcttcccgctggaccagtccaaagcccgg
ctctactcggccctgcacacccccgggcgctatggcagggtaatagtcgcgtccaagcca
ggggggaacatcctgctgcaggcggagcaggtgctgcaggtgcaccgctccgtgctggac
atgaaggtgaactacatgggatacaactacactttctctcacctgtgcatgttgggggac
gaggaccggaagtgcgtcctggatgatattgtgtcagtgatggagggcctgaggcaggct
gccctctccaacaggaccacaaccaggctgcaagtcagctatcccagcaccagactcaag
gatggtcggcagagttttattggtcatcaactaggaggagtttcagaagtacccaacagc
aaggaccagcgtgtgaaatcagccagggccgttcaactcacttactacctccaaacctat
ggctctgccactcaggacacaattagcgagatatgggagaatggtttctgcaaccttatg
caaaagctacagaagaaccacactgacatccagttgttctcacttacatccttcagcctg
atgagggactttcagaagaccattagcctggcacacaccaagatcctggtgagtttgatg
ctggtgctgatgagtgctaccctgtccagctcgatgaaagactgtctccgaagcaagccc
ttcctaggacttctgggagttcttacaatctgcatctccactgtcaccgcagcagggatc
ttcttcgtcacggatgggaaatacaactccaccctgctgggaatccctttctttgccatg
ggtcatggaacaaaaggtgtttttgagcttctttctggctggcgtaggactagagaaaca
ttgccattcaaagacagagttgccggggcatattccgatgtcatggtttcctacacaatg
accagctctctgtacatcattacatttggaatgggtgccagccctttcacaaacatagag
gctgtaaaaatattttgccagaacatgtgcattaccattttattgaactacttctacgtc
ttctcattctatggatcttgtcttgtctttgctggccaactggaacagaaccgttatcac
agtgtcttttgttgcaaaattccctctgaggattacttggatcggcagcccatttggttc
cagaccatgatgagtgatgggcatcagcattcgtcccatcacgagccggatccatacgag
aatcacttcatccaccattttctgcgagaacactacaatgagtggattactaatacctat
gtcaagccttttgtggtcattttatatctcatttatgcatcgttctccttcatgggctgc
ttgcagatcagcggtggctcaaatataatcaatctggtagcgagttactcccccagtgtg
tcctatgcggccagccaacagaaatattttagcaactacagccctgtgataggattttat
atctatgagcccctggaatattggaatgctacagttcaagaggacctgaagactatcagc
catgggttcaacacagagtcctggattgagcagtattaccaatatctgaaaactgtaaac
atctctgcctctaacaaaacagattttatagccaccctccaaaattcctttttgaaaaaa
actgagtttcagcacttcaaaaatgacataataatctcgaaatcaggggatgacattaac
attgttgcatctcgcatgtacttggtggccaaaacaagtgaaaatactcagcgagaagtt
gtggagttgcttgagaagttgagacctctttctttgatacagagcattaaattcattgtg
tttaaccccacctttgttttcatggatcactacagcttgacggtgactatgcctgtcctt
atttctggcttcagtgtccttctagcgttgatattgacgtttttcctggttattcatcct
ttgggaaatgtctgggtaattgtcacagtaacctccattgagttgggggtccttggtttg
atgacactgtggaatgttgacctagattgcgtttcaaccatgtgccttatatactctttg
aacttttccatagatcactgtgcacctctcctttacacgttcgtgctagccactgaacat
acacggactctgtgcattcaggactccctcatggagcacgggacggccatctttcagaac
atcacctcttttctcattgggttgatcccacttctgtttgtgccttcaaatttgacctac
acgctgttcaaatgcttgatgctgactggcagctgcacactgcttcactgttttgtcatt
ttaccagtattcctaacatttttcccaccatccaaaaaacgtcacaagaaaaagagacga
gcaaaacggaaggagcgggaagagattgagtgcatagaaatccatgagaacccagaacct
gtgactgcaatttga
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