Pleurodeles waltl (Iberian ribbed newt): 138297989
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Entry
138297989 CDS
T10800
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138297989 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138297989 (NUP54)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138297989 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
138297989
NCBI-ProteinID:
XP_069092942
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All DBs
Position
1_2:153151601..153279725
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AA seq
511 aa
AA seq
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MAFNFGGAAPAASATPAATGFSLGAFTPKTTATTGFGFGAATTTAASTFGGLFGGTQNKS
FALGSGFGGVGTSTGLGSTLGGGLQFGGFNTQQQQQQQQHQTGLGTLFNQLGGNPAQSNQ
LINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNSIPPVDFTQENPFCRFKAV
GYSCIPNNKDEDGLLVLLFNKKESDIRSQQQQLVESLHRVLGGNQTLCVNVDGVKAMPDD
QTEVVIYVVERSPNGTSRRVPSSTLYSYFEQANVKNTLQQIGVTASMARTELSPAQIKQL
LQNPPAGVDPIIWEQAKVDNPDAEKLIPVPMVGFRELLRRLKVQDQMTKQHQTRLDIISE
DISELQKNQATTMAKIAQYKRKLMDLSHRALLVLIKQEIQRKSGYAIQADEEQLRVQLDT
IQCELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYYVDADLLREIKQHLKHQQEGLSH
LIGIIKEDLEDIKLAEQGLNETVHVRGGIFS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcgggggcgccgctcccgcagcaagcgccaccccggcggctactggg
ttttcactgggtgcgtttacccccaaaaccacagctactacaggctttggatttggagca
gcaacaacaactgcagcatcaacatttggaggtttgtttggtggaactcaaaataaatct
tttgcacttggtagtggatttggtggagtaggtaccagtactggtctgggcagtacgtta
ggaggaggtttacaatttggaggatttaacacacagcagcagcagcaacaacagcaacat
caaactggtttaggcactttattcaatcagctgggtggtaatcctgcccaatccaatcag
ctcataaacacagctagtgccctgtcggcacccacgttattgggagatgagagagatgcc
attctagcaaaatggaaccagcttcaagccttctgggggacaggcaagggatacttcaac
aacagcatcccaccagtggacttcacacaggaaaatccattttgtaggtttaaggctgtt
ggttacagctgtattcctaacaataaagatgaagatggccttctggttttgcttttcaat
aaaaaggagtctgatatccggagccaacaacagcagttagtagaatcgctgcacagagtt
ctgggaggaaaccagactctgtgtgtgaatgtcgatggggtcaaagcaatgcctgatgat
cagacagaggttgtcatctatgtagtagaacgttccccaaatggtacttcaagacgagtt
ccatccagtactctgtatagttactttgagcaagccaacgtaaagaatacactgcagcag
atcggagttacagcttccatggctaggacggagctctctccggcacaaatcaaacaactt
ttacagaatccacctgctggagttgatccgattatttgggagcaggccaaagtggacaac
cctgatgcagagaagctcattccagtcccaatggttggtttccgtgagcttttgagaaga
ctgaaggttcaagatcagatgacgaaacagcatcaaactagattagatattatatccgaa
gatatcagtgagttgcagaaaaaccaggccacaacaatggcaaaaattgcacagtataag
aggaaactgatggacctttcacatagagcacttctggttttaattaaacaagagattcag
agaaaaagtggttatgccattcaggcagacgaggaacagctacgagtacagttggacaca
attcagtgtgaactcaatgcacctactcaatttaagggcagacttaatgagctgatgtca
cagatcagaatgcagaaccactttggagcagtgagatcagaggagcgttactatgtcgat
gccgatctcttgagggaaataaagcagcatttgaagcatcagcaagaaggtcttagtcat
ctgattggcataataaaagaagatttagaggacattaagcttgcagaacagggactaaat
gagaccgtccacgtccgaggagggatcttcagttga
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