Pleurodeles waltl (Iberian ribbed newt): 138299093
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Entry
138299093 CDS
T10800
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04510
Focal adhesion
pwl04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138299093 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
138299093 (RAPGEF1)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
138299093
NCBI-ProteinID:
XP_069093194
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Position
6:complement(26701699..27134466)
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AA seq
1236 aa
AA seq
DB search
MGNATGTPPSLKCFDSGAARHRKRDSQRSHLSSFTMKLKDKFHSPKIRRTNSKKGKSVDL
TVKPTEKPVNKSLSHLEEQEKDVVSALRYFKTIVDKMAIDSKVLEMLPGSASKVLEAILP
LVQVDMRVQQSSAVSSCYSRVYQSLANLIRWSDQVMLEGINSEDKEVVTTVREVIKAVLD
GVKELVRLTIEKQEHPSQTSPTKPSLPACKSDSICSTTDLPLTEREMEILNKSSPVTPPV
EELPNADEEEEAPPKPPLPGIRVVENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSGSS
LPIGISKQDFDVDCYTPRRLSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSGQC
SRNTSCETLDNYDPDYEFLQQDLSSADQIPQLTPGVLSPLPESLGELGSPFHGQVFQMPP
GDSPQTEAMQGGDAPPALPLKKRRSTTPHLSDISSCRISYERHPSQYDNISEDETSLSSL
PSASVPPFSGISPFQQANSSGSVDFMGDFAALESDGLPEKPPPLPEKKNKHMLAYMQLLE
DYSEPQPSMFYRTPQHEHVYQQKNKHLREVYGFNDSFSSIDSGNELAPPPALPPKQRQMG
SYAASHLSSVSYCLQPTKGPLACEDPSAAQGISVSLSNCFLSRHGSLPMHSYKSVFRSYS
QDFASRSPASVPSHLSSATCYSSHFPPVHLSESSGPMGPLAAEPSPSGPDEPVGSLSSQD
SSSSGIAPHCLASQSSFTDSLQTPVSENASEEAGEGEYVNLYSSSQSNGELPHSDGDSPP
LKDGFQEDGLPHAGPSGKESHGSLERHHTLPDSLNEEEDLDETHELFLIDHNEIMSRLTL
KQEGDDGPDVRGGSVDILLVHATETDRKDLVLYCEAFLTTYRTFISPGELIQKLQYRYEK
FCPFPDTFKKRVSKNTFFVLVRVVDELCLVELTDDILKQLMELVFHLVCNGELSLARVLR
KNILDKMENKRALRYANFASRPLAARGVAARPGTLHDFHSLEVAEQLTLLDAELFYKIEI
PEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKVMKHLR
KLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPC
IPYLGLILQDLTFVHLGNPDHIDGKVNFSKRWQQFNILDSMRCFQQRHYDIKRNEEIISF
FNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgcgaccggaaccccaccgtccttgaagtgcttcgactccggcgcagcgagg
cacaggaagagagactctcagcggtcccacctatcttccttcaccatgaagctgaaagac
aagttccactcacccaaaatcaggcgcacaaactccaagaaagggaagtcggttgacctg
actgtgaagccaacggagaaaccagtgaacaagagcttaagtcatttggaggagcaggag
aaagacgtagtcagcgccctgcggtacttcaagaccattgtagacaagatggccatcgac
agcaaagtcttggagatgctgccaggttcagccagcaaagtgctagaagccatcctgccc
ctggtgcaggtggacatgcgtgttcagcagagctcagctgtatcctcctgctatagtcgt
gtgtaccagagccttgccaatctcattcgatggtcggatcaggtgatgctcgagggcata
aactctgaagataaggaagtggtcaccacggtccgagaagtcataaaggcggtcttggat
ggagtcaaggagctggtccggctgacgatagaaaaacaagaacacccgtcgcaaacaagt
cccaccaaacccagtctacctgcatgcaagtctgacagtatctgcagcacaacggatctg
cctctgacagagcgagaaatggaaatcctgaacaagtcaagcccggtcacaccacccgtt
gaagagctacctaatgcagatgaggaagaggaggccccgccaaagccccccctacctgga
atccgagtggtggaaaacagtccaccacctgcattaccaccgaaaaagaggcagtcggca
ccatcccctacccgggtggcagttgtggcacctatgagtcgggcgaccagtggctccagt
ttaccgattggaatcagcaaacaggattttgacgttgactgctataccccgcgacggctc
tcgggaggaagccactcatacggaggagagtccccccgcttgtcaccttgcagcagcata
ggcaaactcagcaaatccgatgagcagctgtcctcgctggatcgagacagcggacagtgc
tctcgcaatacaagctgcgagactctagataattatgatcctgactacgagttcttgcag
caggacctgtcaagtgctgaccagatccctcagctgactccgggcgttctcagccccctg
ccagagtccctgggagagctgggctcccccttccatggtcaggtcttccagatgccccct
ggtgactctcctcagactgaggccatgcagggcggcgatgcccctccggccctaccgctg
aagaagcgaaggagtaccacgcctcacctctcggacatctctagctgtcgtatctcctat
gagagacacccttcccagtatgacaacatctccgaggatgagacgtctctttcctctctg
cccagtgcctctgtgcctcccttctcaggcatctcacccttccagcaggcaaactcttcc
ggctctgtggacttcatgggggactttgcagcactggagtcggatggacttccggaaaag
cctccacctctgccggagaagaagaacaagcacatgctggcctacatgcagctgttggaa
gactactcagagcctcaaccgtccatgttctaccggactcctcagcacgagcacgtgtac
caacagaagaacaagcacttgagggaggtatatggcttcaacgactccttcagcagcatt
gactctggcaatgagctcgcccctccaccggccctaccacccaagcagagacagatgggc
tcctatgctgcctctcacctctcctctgtctcctactgcctacagcctactaaagggccc
ttggcgtgtgaggatcctagcgccgctcagggcatcagtgtctcgctctctaactgcttt
ctcagccggcacggctccttgcccatgcattcgtacaaatctgtgttccggtcatactcg
caggactttgcctcccgaagcccagcttctgttccttctcacctgtcctctgccacctgt
tattcttcccatttccctcctgtccacctgtctgagagctctgggccgatggggccactc
gctgcagagccatcaccgagtggcccggatgagcctgtcggctccctctcctctcaggac
agcagttctagcgggatcgcgcctcactgccttgcttctcagtcttctttcactgattct
ctccagacgcctgtgagtgaaaacgccagcgaggaggcaggggagggcgaatacgtcaat
ctctattcctccagccaaagcaatggagagctccctcactctgacggagattccccaccc
ctgaaagatggcttccaggaggatggattgccacatgctggcccgtctgggaaggagagc
catgggtccttggaaaggcatcacacgctaccggactcactgaacgaggaggaggacctg
gacgaaacacacgagctgtttctgatagaccacaacgagatcatgtcgaggctcaccctc
aaacaagagggcgacgatggccccgatgtcaggggtggatctgtggacatcctgctggtc
cacgctacagagactgatcgcaaagatctggtcctatattgtgaagctttcctgacgact
taccgcactttcatttctccaggagagctgatccagaagctgcagtacagatatgagaag
ttctgtcccttcccggacaccttcaagaagcgggtcagcaagaacaccttctttgtgttg
gtgcgggtggtggacgagctctgcctagtggagctgacggatgacattctgaagcagctc
atggagctggttttccatctggtttgcaacggggagctcagtctggcaagagtcttgagg
aagaacatcttggataaaatggagaacaagagggcgctgcgctatgccaactttgccagc
aggcccctggctgccaggggcgtcgccgccagaccgggcactttacatgacttccacagc
cttgaagttgctgaacagctgaccctgttggatgctgaactcttctacaaaattgagatt
ccagaagttctgctgtgggccaaagagcagaacgaagagaagagcccgaatctgacgcag
ttcacggagcactttaacaacatgtcctactgggtcaggtctataatcatgctgcaggaa
aaggcccaggaccgggaaaggctgctgctgaagttcattaaagttatgaagcacttacgg
aagctaaataattttaattcctatctggcaattctctctgcactggactctgcacccatc
cgaaggctagagtggcagaagcagacatcagagggcctggcagaatactgcaccttgatt
gacagctcctcttccttcagagcctatcgagcagcactgtctgaggtggagcccccgtgc
ataccttacctgggcttgatcctccaggacctcacgtttgtgcatttgggaaatccagat
cacatcgatgggaaagtgaacttctcgaagcgctggcagcagttcaatattcttgacagc
atgcgatgtttccagcaaaggcactacgacatcaaacggaatgaagaaatcatctccttc
ttcaatgactttagtgaccacctcgccgaagaggctctgtgggaactatctttgaaaatt
aaaccccgcaacataacgcggaggaagacagaacgggaggagaagacttag
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