Pleurodeles waltl (Iberian ribbed newt): 138299168
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Entry
138299168 CDS
T10800
Name
(RefSeq) vesicle-trafficking protein SEC22b-like
KO
K08517
vesicle transport protein SEC22
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04130
SNARE interactions in vesicular transport
pwl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
138299168
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138299168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138299168
Membrane trafficking [BR:
pwl04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
138299168
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
FAT
Sec20
Motif
Other DBs
NCBI-GeneID:
138299168
NCBI-ProteinID:
XP_069093354
LinkDB
All DBs
Position
6:complement(49945348..49984135)
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AA seq
216 aa
AA seq
DB search
MVVLTMIARVQDGLLLAASMQENEQSSRNLQEYQNQAKQLFRKLSEHSPPRCSLEAGPMT
FHYLISQGVCYLILCDAAYPKKLSYAYLEELQAEFSELYGKRVGLVSRPYAFIEFDNYIQ
KLKKSYVDSWSKRHLTSINSELQDVQKIMVTNIEEVLQRGEALSVLDSKAGNLSMISKKY
RKDAKYLNTRSTYAKLAASGIFLFMLMMYLRFWWLI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcttgactatgattgcccgtgtccaggatggtctgcttctggccgcctccatg
caagaaaatgagcagtcgagccgcaatttgcaggagtaccagaaccaggccaagcagctg
ttccgcaagctaagcgagcactctcctccccgctgctccctggaggccggtcccatgaca
tttcattacctcatctcacagggggtctgctacctgatcctgtgtgatgcagcttaccct
aaaaagttgtcctacgcctacctagaggagctgcaggcagagttcagtgagctgtacggc
aagcgggtaggcctggtctccaggccttacgccttcattgagttcgataactacatccag
aagctgaagaaatcctatgtggactcctggtccaagcgacacctgacctccatcaacagt
gaactccaagatgtgcagaagatcatggtgactaacatcgaggaggttctgcagcgagga
gaggcattgtcagttctggactcaaaggcaggtaacctctccatgatctctaagaagtac
cgaaaggatgccaagtatttgaacacacgctccacctacgccaagttggcggcctctggc
atcttcctcttcatgctgatgatgtacctgcgtttctggtggcttatatag
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