Pleurodeles waltl (Iberian ribbed newt): 138299172
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Entry
138299172 CDS
T10800
Symbol
RNF5
Name
(RefSeq) E3 ubiquitin-protein ligase RNF5 isoform X1
KO
K10666
E3 ubiquitin-protein ligase RNF5/185 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138299172 (RNF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138299172 (RNF5)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138299172 (RNF5)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138299172 (RNF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-ANAPC11
Prok-RING_4
zf-C3HC4_4
PTR3_N
Baculo_IE-1
IBR_1
zf-UDP
Rtf2
zf-RING_16
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
138299172
NCBI-ProteinID:
XP_069093361
LinkDB
All DBs
Position
6:complement(50603007..50641996)
Genome browser
AA seq
185 aa
AA seq
DB search
MASGTEGDGQPGEREPGGSGAPGGSAGATFECNICLDTARDAVISLCGHLFCWPCLHQWL
ETRPDRQECPVCKAGISRDKVIPLYGRGSTSQQDPRLKTPPRPQGQRPEPESRGGFQGFG
DTGFHMSFGIGTFPFGLFTTVFNTNDYFHRAGNLDGAPHGNNGSSWQDSLFLFIAIFFFF
WLLSV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggaaccgagggtgacgggcagccgggggagcgcgagcccggagggtccggt
gccccgggtggcagcgcgggcgccaccttcgaatgcaatatatgcctggacacggcccgg
gacgcggtgatcagtctctgcggacacctgttctgttggccatgtcttcatcagtggctc
gagacacggccagaccgccaggagtgccctgtgtgcaaagctgggatcagccgggataaa
gttattccactctatggcagagggagtaccagccagcaggatccaaggttaaagacgcca
ccacgacctcaaggacagaggccagagccggagagcagagggggcttccaaggctttgga
gacactggctttcatatgtcatttggcattggtaccttcccctttggcctctttaccaca
gtgttcaacacaaacgactactttcacagagcaggtaacttggatggagctcctcatggc
aacaatggcagcagctggcaggactcgctgttcctcttcatcgcaattttcttctttttc
tggctcctgagcgtgtga
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integrated database retrieval system
