Pleurodeles waltl (Iberian ribbed newt): 138299435
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Entry
138299435 CDS
T10800
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138299435 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pwl04054
]
138299435 (DHX58)
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138299435 (DHX58)
Pattern recognition receptors [BR:
pwl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
138299435 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_11
AAA_22
SRP_TPR_like
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
138299435
NCBI-ProteinID:
XP_069093776
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All DBs
Position
6:complement(154028110..154101123)
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AA seq
683 aa
AA seq
DB search
MMDLYDYQWEVIQPALEGKNIIIWLPTGSGKTRAAVYVTKRHLQMKRNAKVAVLVNKVHL
VEQHYSKEFSPHLKDEYRLIAISGDSDEKSFFAEAVKSNDIIICTAQILQNALKSKDELK
HVELTDFTLLVIDECHHTHKDGVYNKLMESYTEKKLRQEGKLPQILGLTASPGTGRATNI
DSAKLHILQICANLDTWKIMSPKEHLPQLEEKAHQPQKEFNLTDQRPRDPFGDRLKHIMN
AIHDYLDDDELQGTELGTQIYEQKIVELEKEGAVEACRKKRVCALHLRKYNDALLIHDTV
RMIDAFNTLEKFYTIEKLRRTQDDPTEQFLFRIFDENKQALSRLANDTSYQNPKLQMLEK
ILMEHFGYSAQSCGIIFTKTRQSTHSLHEWICTSDGLKGLAKITAALTGTGSNSQTKHMT
PHEQQAVIQRFRQGTLKLLVSTSVAEEGLDIPECNIVIRYGLMTNETAMIQARGRARAPD
STYSILAARGGKEERRECTNELLEQLMNRAIEAVQAMPEAEYLLEIRKLQTESIISRKVK
QQKLDDKKRTYQPQDVRLYCRNCNEAVAHGNDLRTIENSHHVNINLDFKIYYSVSDNPVE
LGREMIDWVPGGLISCTCGQEWGMEMLYKALNLPAISIKNFVVETSDGQRKTYKKWKDVP
FEVEEMDYVAVCELQYSDLTDFD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatggatctgtacgattaccaatgggaggtgatccagccggcacttgagggaaaaaac
atcatcatttggctcccaacaggttccgggaagaccagagcagcggtgtacgtgaccaag
cggcacctgcagatgaagcgcaatgccaaggtggcagtactggtgaacaaggttcatttg
gtggaacaacactacagcaaggagtttagtccacacctcaaggacgagtaccgcctcatc
gctattagtggggatagcgatgagaagagcttcttcgctgaggcagtgaagagcaatgac
atcattatatgcactgcgcagatcctgcaaaatgcgctgaaatccaaggatgaattgaag
catgtggaactaactgatttcacgctactggtaatcgatgaatgccaccatacacacaag
gacggagtctacaataagctcatggagtcgtacacggagaaaaagcttcggcaggagggg
aaacttcctcagattctgggactcacagcctctcctggcaccggcagagccaccaacatt
gacagcgccaaattgcatatattacagatctgtgccaacctcgacacttggaagattatg
tcaccaaaggagcatctccctcagctggaggaaaaggcacaccaaccacaaaaagagttc
aatctgaccgaccagaggccccgggatcctttcggtgacagactaaagcacatcatgaat
gcgatacatgactatctagatgatgacgaattgcagggcaccgagctcggtacccagatc
tatgagcagaaaatcgtggagctagaaaaagaaggggcagtcgaggcctgcagaaagaag
agggtctgtgcactgcacctacgaaagtacaacgacgcactgctgatccacgacaccgtc
cgaatgattgatgcttttaacaccttggaaaaattctacaccatcgagaaactcagaaga
acacaggatgaccccacagagcagttcttgttccggatattcgatgaaaacaaacaagca
ctgtcacggttggctaacgacaccagctaccagaaccccaaactgcaaatgctggagaaa
atcctaatggaacactttggctattctgcacagtcatgtggtattatcttcaccaagacg
cgacagtccacgcactctctgcacgagtggatctgcacatctgatgggctaaaagggctg
gccaagatcaccgctgctctgaccgggacaggatcaaacagccaaaccaagcacatgaca
ccacatgaacaacaagcagtcatccagaggttccgccagggaacgctgaaactcctggtc
tccaccagtgttgctgaagagggtctggatataccagagtgcaatattgtcatccgatat
gggctgatgacgaatgagaccgccatgatacaggctcgagggcgtgcccgagcacctgac
agcacatactccatcctagctgctagaggggggaaagaagaacgtcgagagtgcaccaat
gaattgctggagcagcttatgaatcgtgccattgaagctgtccaagccatgccagaggct
gagtatctgctggagatccggaaactgcaaacagaatcaataatttccaggaaagtgaaa
caacagaaattagatgacaagaaaagaacataccaaccacaggatgttcgactttactgt
aggaactgcaatgaagcagtcgcccacggcaacgacctgcgcacgattgagaactcacat
catgtcaacatcaaccttgattttaaaatctactacagtgtgtccgacaatccagtagaa
cttggcagagaaatgatagactgggtgcctggtggactgatcagctgcacatgcggacag
gagtggggcatggaaatgctctacaaggcactcaatcttcctgccatctccatcaaaaac
tttgtcgtggagacatctgatggtcaaaggaagacgtacaagaaatggaaggacgtgcca
tttgaggttgaagagatggactacgtagcggtgtgtgagctgcagtattcggacctgaca
gattttgactga
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