Pleurodeles waltl (Iberian ribbed newt): 138299499
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Entry
138299499 CDS
T10800
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03040
Spliceosome
Brite
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138299499 (DHX8)
Spliceosome [BR:
pwl03041
]
Complex C
Other components
Step II factors
138299499 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
S1
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Transformer
T2SSE
Flavi_DEAD
AAA_16
PhoH
ABC_tran
TsaE
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
SAGA-Tad1
Presenilin
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
138299499
NCBI-ProteinID:
XP_069093874
LinkDB
All DBs
Position
6:184226866..184478600
Genome browser
AA seq
1191 aa
AA seq
DB search
MADIAQEELRKLEHLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFESFKSVLLKN
GAEFTDSLISNLLRLIQTMRPPAKQPSGKESLIKPKSEKEKLKELFPALCRPDIPVVKVK
MMLDEDDVKVAADALKELEALMPGAVVEDKRKSSKHKDKKRKRSRSRSRDRDRKRRRSSR
TRSRSRDRKKEKLRHRSRSTSPIKESRDRERHTDKNNERWREKHVERPPPEEPSIGDIYN
GKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGS
KTSLSMKDVDQETGEDLNPNRRRNLVGETNEEASMRNPDRPSHISLVNAPEVEDDTLERK
RLTKISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFL
RGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHW
VDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYR
LKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKR
VSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHE
RTIHTDVLFGLLKKTVQKRKDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYT
KEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELII
LPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKT
GIDQLVVTPISQAQAKQRAGRAGRTGPGKTYRLYTERAYRDEMLTTNVPEIQRTNLASTV
LSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPML
CKMLIMSVHLACSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVY
NSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCAKATVRVQKAICS
GFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTID
PRWLVEFSPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggcggacattgcacaggaagaactgcggaaacttgagcatctctctctggtgtccaag
gtctgtacggagctggacaatcatcttgggatcaatgacaaggatctggccgaatttgtt
attagccttgcagagaaaaacacaacatttgaatctttcaaatcagtactgttgaagaat
ggtgctgaattcacagattctcttattagtaatttattgcggcttatccaaacaatgcga
cctccagcgaaacaaccctctggcaaagaaagccttattaagccaaaatcagaaaaagaa
aagttgaaggagctctttccagcactttgccgacctgatattccagttgtgaaggttaag
atgatgcttgacgaagatgatgttaaagtagctgctgatgcattaaaagaacttgaagct
ttaatgccaggtgcagttgttgaagataaaaggaaaagcagtaaacacaaagataaaaaa
aggaaaaggagtcgaagccgtagccgggacagagacagaaagcggcgtcgctcatctcgg
actcgttcaagatcaagagatcgaaagaaggagaagctcagacatcgttccaggagcact
agcccgatcaaggaatcacgcgatcgtgaacggcacacagataagaacaatgaacgatgg
cgcgaaaagcatgtggaacgcccaccacctgaggaaccttccattggggacatctacaat
ggcaaagttactagtatcatgcagtttggatgctttgttcagctagaagggctgagaaag
cgctgggaaggattggttcacatctctgagctcagaagggaaggccgtgtagctaatgtt
gctgatgttgtgagtaaagggcaaagagtgaaagttaaagtgttgtccttcactggctct
aaaaccagcttgagcatgaaggatgttgatcaggagactggagaagatctgaatcctaac
agacgtcgcaaccttgtaggtgagaccaatgaagaagcttcaatgaggaaccctgacaga
ccaagtcatatttcactcgttaatgcaccagaagtggaggacgatacattggaaagaaaa
cgtcttacaaaaatatctgatcctgagaaatgggaaattaaacagatgattgcagccaat
gttctgtccaaggaggagtttccagattttgatgaagaaactggaatcctgccaaaagta
gacgatgaagaagatgaggacctagagatagaactggtggaagaggagcctcctttcctt
agaggacacaccaagcagagcatggacatgagtcccatcaaaatagtgaagaatccagat
ggatcgttgtctcaagctgctatgatgcagagtgctctagctaaagaaaggcgggagctt
aaacaagctcaacgagaggctgaaatggattctattccgatgggccttaataagcactgg
gtggaccctcttcccgatgtggatgggaggcagatcgcagcgaatatgagggggattggg
atgatgcccaatgatattccagaatggaagaaacacgcttttggtggcaacaaggcatcc
tatggaaagaagacacagatgtccatcttggagcagcgagagagtctgcccatctacagg
ttaaaggagcagctgattcaggctgttcatgacaaccagatactcattgtcattggtgaa
acaggatctggcaaaactacccaaatcacgcagtacctggctgaagcgggttacacgact
agagggaaaataggctgcacccagccaagacgagtcgctgcaatgtccgtcgctaagaga
gtatctgaagagtatggttgttgcttaggacaagaggttggttacaccattcgatttgaa
gactgcacaagccccgagactgtcataaagtacatgacagacggcatgttactgagggag
tgcctcatcgaccctgacttgacccagtatgccatcatcatgctagacgaggcccatgag
aggacaatccacactgatgttctctttggactgctgaaaaagactgtccaaaaacgcaag
gatatgaaattgattgtaacatctgcaacattagatgctgtgaagttttcacagtatttt
tacgaagcgcccatcttcacaattccaggtcgaacatacccagtggagattctctataca
aaggaacctgagactgactacctggatgccagcctgattacggtcatgcagatccattta
actgaacctccaggtgacatactggtctttttgactggtcaagaggaaatcgacacggct
tgtgagatcttgtatgagagaatgaagtcccttgggccagatgtgcccgagttaatcatc
ctgcctgtgtattctgctttgcccagtgaaatgcagactagaatttttgatcctgctcct
cccggcagtagaaaggttgtcattgcaacaaacatcgctgagacctccctgaccatcgat
ggcatttattatgttgtggacccaggctttgtgaagcaaaaagtgtacaactcaaaaact
ggaatcgaccagcttgttgtgacacctatatcgcaggcgcaggcaaagcagcgtgcagga
agagctggaagaacgggacctggaaagacctatcgactttacacagagagagcttacaga
gatgaaatgttaacaaccaacgtgcctgaaatacaaagaactaatttagctagcactgtg
ctttctctaaaggcaatgggaataaatgatttgctgtctttcgacttcatggacgctcct
ccaatggaaactctgatcacagcaatggagcagctgtacactcttggagctctggatgat
gaaggacttctgacccgacttgggcgtaggatggcagagtttcccctggagcccatgctg
tgtaagatgttgatcatgtctgtgcacctggcttgcagtgaagaaatgttaaccatcgtc
tccatgctttctgtacagaatgttttttacagaccaaaggacaagcaagctcttgctgac
cagaaaaaggcaaaattccatcagacggaaggggatcacctcactttgcttgcagtatat
aactcttggaagaacaacaaattttcaaatccctggtgctatgagaattttatccaagcg
cgctcgttacgtagggcccaagacatccggaagcagatgctgggtataatggacaggcat
aagctagatgttgtatcatgtgcaaaggcaacagttcgcgtacaaaaggcaatctgcagt
gggtttttccgaaatgcagccaagaaagatccccaggaaggctatcgtactcttatcgac
cagcaggtggtgtatatccacccttcaagtgcactgtttaacaggcagccagaatgggtt
gtgtatcacgagttggtgctgaccacgaaggagtacatgcgagaggttacaaccatcgat
ccccgctggcttgtcgaattttctccagctttcttcaaggtctccgacccaaccaagctc
agcaagcagaagaaacaacaaagactggagcccctgtacaaccgctacgaagagcccaat
gcctggagaatatcccgagctttccgccgccggtga
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integrated database retrieval system
