Pleurodeles waltl (Iberian ribbed newt): 138299517
Help
Entry
138299517 CDS
T10800
Symbol
SPOP
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138299517 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138299517 (SPOP)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
138299517 (SPOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
138299517
NCBI-ProteinID:
XP_069093897
LinkDB
All DBs
Position
6:complement(197065903..197245961)
Genome browser
AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPDVFKEMMCFIYTGKASNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVD
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVLSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggtgccgagtcccccgccgccggcagaaatgtcgagtgggccggttgcagaa
agctggtgctatacacagatcaaggtggtaaagttctcctacatgtggaccatcaacaat
ttcagcttctgcagggaggaaatgggcgaagtgatcaaaagctcaaccttctcctctggt
gctaacgacaagctgaaatggtgtttaagagttaatcccaaaggcttggatgaagaaagc
aaagactacttatcactttacctgctgcttgttagttgcccaaagagtgaagtgcgcgcc
aagttcaaattttcaatcttgaatgccaagggtgaagaaacaaaggccatggagagccaa
cgagcataccgctttgtgcaaggaaaagattggggcttcaagaagttcattcgtcgggac
tttcttctggatgaagccaatgggctgctccctgatgacaagctcacacttttctgtgag
gttagtgtggtgcaggactcagtcaacatctctggccagaacactatgaacatggtgaag
gtgccagagtgtcgcctggcagatgagttgggaggattatgggaaaactcacgcttcact
gattgctgcctatgcgtggctggccaggagttccaggcccacaaagccatacttgcagca
cgctctcctgttttcagtgctatgtttgaacatgagatggaagagagtaaaaagaaccga
gtggaaataaatgatgtggaaccagacgtcttcaaggaaatgatgtgcttcatctacaca
gggaaggcatcgaacctggacaagatggcagatgacttattagctgctgctgacaaatat
gcactggagcgtttaaaggttatgtgtgaggatgccttatgcagtaacctctctgtggac
aatgcagcggagatcctcatccttgctgacttgcatagtgccgaccagctgaaaacccag
gctgtggacttcatcaactaccacgcttcagatgtcatggaaacctctggctggaagtcc
atggttctttcgcaccctcacctagtggcggaagcctaccgttcattggcgtctgcacag
tgtcccttcctcggacccccacgcaagaggctgaagcagtcataa
DBGET
integrated database retrieval system
