Pleurodeles waltl (Iberian ribbed newt): 138299744
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Entry
138299744 CDS
T10800
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
138299744 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138299744 (CHD8)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138299744 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
DEAD
HTH_Hrp3
MUN
Myb_DNA-bind_7
DUF2683
Motif
Other DBs
NCBI-GeneID:
138299744
NCBI-ProteinID:
XP_069094370
LinkDB
All DBs
Position
6:365704788..366718596
Genome browser
AA seq
2546 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTEDTFDHEGPDTMDDALGLTASLSQLTPETGNVLTTSNLV
ATDLNTQSAQTSEPPTITTVPVSAPESLLLHDYTSLPASVQQTQPVLQAERGQEALSQGN
PFMGVNTVTGSGQQAPKIVILKAPPGMTVAGTPVGQLQAVTQQQPLAGRAPNGGKVTYAK
VLTGTPLRPGMSIVSGNTVLAAKVGGQGTVQRLVQPNRPVKQLMLQPIKSQPVQGNVVTS
GATVLKPGVTLTTSPAQGESKRITLVLQQPPQGGQGGPRQVMLGGMPGKILLQSNQLAAL
TQAKNAHGQPAKVVTIQLQMQQPQNSGQQPQKFQFVQQGHSQTVMLAPSGQQGLRQAVPL
KVVLHPQTATSQGSSPGLSVVKVLTANEVASLSSSVPSGKVGGTGETRKLEHQKKQEKAN
RIVAEAIARARARGEQNIPRVLNEDELPAVLADGDEGSLGDKKRRKRASGIRLGRSDKSK
EEKPKKAKSSMSSKSRGKSKTNTITPIVGKKRKRNVSSDNSDGEQAAAGQSTDPQDEDEN
CIQKRRSNRHVKRRKYTEDLDFKITDDEEEEDVDVTGLVKMEPMAVSEGLLPPTEPAECV
PSMQFFVENPSEEDAAIVDKILSMRVVKKEVRGLPNGMYMEAEEFFVKYKNYSYLHCEWA
TIEQLEKDKRIHQKLKRFKTKMAQMRHYFQEDEEPFNPDYVEVDRILEESHTIDKDNGEA
VIYYLVKWCSLPYEDSTWELKEDVDELKVQEFKRIQSRTPDIKRVARPLASAWKKLERSR
EYQNGNELRDYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLEEVYSVGLRGPFL
VIAPLSTITNWEREFSTWTNMNTIVYHGSLASRQMIQQYEMYCKDSKDRLIPGAYKFDAL
ITTFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT
VEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAP
KQETIIEVELTNIQKKYYRAILEKNFSFLSKGANHANTPNLLNTMMELRKCCNHPYLITG
AEEKILAEFRDSCHAIPHDFHLQAMVRSSGKLVLIDKLLPKLKSGGHKVLIFSQMVRCLD
ILEDYLIQKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADT
CIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLVTRNSYEREMFDKASLKLGLDKAVLQ
SMSGRECHLTGQIQQFTKKEIEDLLRKGAYAAIMDEDDESSKFCEEDIDQILQRRATTIT
IESEGKGSTFAKASFVASENRTDIALDDPNFWQKWAKKADLDIDSLNSKETLVIDTPRVR
KQTRHFSNLKDDDMVSFSDLESEDDDMRPRPRRHDRHHHGYGRTDCFRVEKHLLVYGWGR
WKDILSHGRFKRRMSERDVEIICRTILVYCLLHYRGDETIKSFIWDLISPLENGQSKELQ
NHTGNCLSIPVPRGRKGKKMKSQNNFDVHKADWIRKYNPDSIFQDEGYKKHLKHQCNKVL
LRVRMLYYLRQEVIGNQAMRVLGGTDARAIDIWLPEVDPLEVPTGWWDTEADKSLLLGVF
KHGYEKYNTMRADPALCFLEKVGRPDEKAIAAEHRVLDNFSDLVEGVDFDKDCEDPEYRP
LHLQRDQDEEGDMMMDEEISVVDGEEAQAPLPGRLCWPPGSALTARLRRLITAYQRSFKR
EQAKIEAAERGDRRKRRCEAAFKLKEIARREKQQRWTRREESEFYRVVSSFGVEYDPDTQ
QFNWDRFRSFARLDKKTDASLVKYFLGFVAMCRQVCRLPPVAGDESTDHTLFIEPITEER
ASRTLYRVELLRRLREQVLCHPLLQERLALCQPGSDLPEWWECGRHDGELLRGAARHGVS
RADYSIMQDPELSFLTSRQAYIQSRPAPSRCSTPLLHQSLSLNDSHNVSPLTLALETRRD
GSAEEIKQHALESLSVKLEAEVAAEAAAAAAAESVTLVRGFVGPHRGGPLPIQKMSAAGE
NDSDSELDLTKMSASTSASSTLSSDDSDEEKIKAIDVPRASLYDDESLLSLSMSQDGFPS
AISERSATDLLQEKHRISEWPKDRVLINRIDLVSQAVLTGKWPSPRRTPESIISVQPQGT
VPFSPDTSHSTGACDDSFATTPRSSNLEDEAASQFTKLRRGIDEKEFTVQMKDEEGLKMT
FQKHRMLANGGVSDGHLLFRKKKGSKKKTTELKVERMAEPLWQEPWIDIEARIPVVNNQG
KLLLGEDAPRRCELESWLQGHPEFSVDPRFLAYMEDRRKQKRHRVKKPKKLSHSDFSGVE
HVQPAHYRNEKKGHLPETIFDRLHPGPKVKEDGKKRSKRPRHDFAKMVALMQRGGSAGSM
SSTVCGAMDRLLAGPGNASLHDFQNRGLMPVPVMSRRLDHQHHTGSSGSGLPFMQYGGAS
GASGHLDSADLGLLHPAGLNSLAYHQPHLHHSPAGDLRRRGLEAEEVEDGEVDDLSQDYD
SSERDFSLIDDPMMPANSDSSDTDEN
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgatcatggacctctttgatgaccccaacctctttggcctggactcattg
actgaagacacctttgaccatgaagggccagacaccatggatgatgcccttggcctcaca
gccagcctttcccagctgaccccagagactgggaacgtgctgactaccagtaaccttgta
gcaactgatttgaacacccagtctgctcaaacctctgaacctccaaccatcaccactgta
cccgtcagtgcaccagaatccttgcttcttcatgattacacgtctttacctgccagtgtg
cagcagacccaaccagttctacaggcagagagaggccaagaagcacttagccagggaaac
ccgttcatgggagtcaacacagtcactggaagtggccagcaggccccaaagatagtaatc
ctcaaggccccacctggcatgactgtggctgggaccccagttggacagctccaggcagtc
acccaacaacaaccactggcaggtcgtgcaccaaatggaggcaaggtgacttatgccaaa
gtgttgactggcaccccattgcggccgggaatgtccattgtgtctggaaacactgtgttg
gctgccaaggtgggtggccagggcacagtgcagcgacttgtgcagcccaacagaccagtg
aagcagctgatgttacagcccatcaagagccagccagttcagggaaacgtggtgaccagc
ggagctactgtgcttaagccaggggtcaccctcaccacctcccctgctcagggtgagtct
aagaggataaccctggtactacaacagccaccccagggtgggcagggcggcccacggcaa
gtgatgttaggtggcatgcccggcaagatcctgctgcagagcaatcagctggctgctctg
actcaggccaagaatgcccatggtcagcctgctaaggtggtgaccatccagcttcagatg
cagcagccacagaattccgggcagcagccacagaagttccagtttgtacagcagggccat
tcgcaaaccgtgatgcttgctccttctggtcagcagggtctgcgacaagctgtgccccta
aaagtggtcctgcatcctcagactgcaacttcgcaaggcagctcccctggcctctccgtg
gtgaaagtcctcacagctaatgaggttgcatcactctcctcttctgtaccctctggcaag
gtgggaggaacaggtgaaacgcggaagctggagcaccagaagaagcaagaaaaggctaac
cgaattgtagcagaggccattgcccgtgctcgggcgcggggggagcagaacattccaagg
gtcctgaatgaagatgagctgcctgctgtgctggctgatggagatgaaggaagccttggt
gataagaagaggagaaaaagggcctcaggtatccggcttggacgaagtgacaagagcaaa
gaggaaaaacccaagaaggctaaatcatctatgtcatccaagtccagaggaaagtccaaa
actaacaccattacccccatagtgggtaaaaagcggaaacggaacgtctcttctgacaac
tctgatggagagcaggctgctgctggccagtccacagacccacaggacgaggatgaaaac
tgcattcagaagaggcgctccaacagacatgtgaagcgcagaaagtacacagaggacctg
gacttcaaaataacagatgatgaagaggaggaggatgtggatgtaacagggttggtgaag
atggagcctatggcagtctctgaaggattactgcccccaacagagccagcagaatgtgtt
ccctcaatgcagttctttgtggaaaaccccagtgaagaagacgcagccattgttgacaaa
attctgtccatgcgtgtagtgaagaaggaggtgagagggcttcccaacggcatgtacatg
gaggcagaggaattctttgtgaagtacaaaaactattcatacctgcactgtgagtgggcc
acaattgaacaactggagaaagacaaacgcatacaccagaagttaaagcgattcaaaacc
aagatggcacagatgcggcactacttccaggaggatgaggaaccatttaatccagactat
gtggaggtggaccgcatactcgaagagtctcataccattgacaaagataatggtgaagcg
gtcatctattacttggtgaaatggtgctctttaccgtatgaggacagcacctgggagcta
aaggaggatgtggatgaactgaaggtgcaagagtttaaacgcatccaatcgcgaacccct
gacattaagagagtagcccgcccactcgctagtgcctggaaaaagcttgagagatcgcgt
gagtaccagaacgggaatgaactgcgagattatcagctggagggagttaactggttgctg
ttcaactggtacaacaggcagaactgcatcctagcagatgagatgggattgggaaagacc
atccagtccatcacttttcttgaggaggtgtacagcgttggcctgcgtggtcccttccta
gtcattgctccactttccaccatcacaaactgggagcgtgagttttccacttggactaac
atgaataccattgtttatcatggaagcctggccagtcggcagatgatccagcaatacgag
atgtactgcaaggactccaaggatcgtctcattcctggtgcatataagtttgatgccctg
attacgacttttgagatggtgttgtcggactgccctgagctgcgtgagatcgagtggcgc
tgcgtgatcatcgatgaggcccacaggctgaagaaccgcaattgcaagcttttggacagc
ctcaaacatatggacctggagcacaaagtcctgctgactggcacccctttgcagaacacc
gttgaggaactcttcagcttgctgcactttctagagccatcacagttcccttcggagtct
gaattcctgaaagactttggtgacctgaagacggaggagcaggtacagaagctacaggcc
attctgaagcccatgatgttgcgccggctgaaagaggatgttgaaaagaacttggcaccc
aagcaggaaaccatcattgaagtggagcttaccaacattcagaaaaagtactaccgggct
atactggagaagaacttctctttcctgtctaagggtgccaatcacgccaacactcccaac
ctgctcaataccatgatggagctacgtaaatgctgcaaccacccctacctcattactggt
gcagaagagaagattctggcagagttcagagattcctgccacgccataccccatgacttc
caccttcaggccatggtgcgctcgtcaggaaagctggtgcttattgataaactactgccc
aagctaaagtctggcggacataaggtgctcattttttctcagatggtacggtgccttgac
atcctggaagactacctcattcaaaaaagatacttgtatgaacgcatcgatgggcgtgta
cgtggtaacctgcggcaagcagccatcgaccgtttcagcaaaccagattcagaccgtttt
gttttcctgctgtgcacgcgtgcgggaggcttaggcatcaacctgactgcagccgacacc
tgcatcatctttgattcggattggaacccacagaacgatctccaggcccaagcccgttgt
catcgcatagggcagagcaaagccgtaaaggtgtaccgcctggtgacacgaaactcgtat
gaacgcgagatgtttgacaaggccagtctgaagttagggctggacaaagctgttctgcag
tccatgagtggccgggagtgccaccttactgggcaaatacagcagtttaccaagaaagag
atagaggatctgctgcggaaaggggcctatgccgccataatggatgaagatgacgagagc
tcaaagttctgtgaggaggacatagaccagatcctccaacgccgtgccacaacaattacc
attgagtcagagggcaagggatccacgtttgctaaggcaagttttgtagcgtctgaaaac
agaacagatattgcattggatgatcctaacttctggcagaagtgggccaagaaagcagat
ctcgacatagattctcttaacagcaaggagactctggtgatcgatacaccacgggtgcga
aaacagacacgtcacttcagcaacttgaaggatgatgacatggtgtcattttcggatctt
gagagtgaggatgatgatatgcgaccacgaccccgaagacatgatcggcaccatcatggc
tatgggcgtactgactgcttccgtgtggaaaagcacttgctggtttatggatggggccgt
tggaaagatatcctgtcccatgggcggtttaagcgacgaatgtcagaaagagatgtggag
atcatctgccgcactatcttggtttattgcctgttgcactatcgcggggatgagaccatc
aagagcttcatctgggacctgatcagcccacttgaaaatgggcagtcaaaggaactgcag
aaccacactggtaattgtctttccatcccagtgcctcgcgggcgcaaaggcaagaagatg
aaatcccaaaacaactttgatgtccataaggccgactggatacgcaagtacaacccagac
tcaatcttccaagatgagggttataagaagcacctcaaacaccagtgcaataaggtacta
cttcgtgtccggatgctctattatctgaggcaggaggtcattggaaatcaagccatgcgt
gttttggggggaactgatgccagagcaattgacatttggttaccagaggtggatcctttg
gaggtgccaacaggctggtgggacacggaggctgacaagtctttgcttcttggagtcttt
aagcatgggtatgagaaatacaacactatgcgtgcagatccagcgctctgctttctggag
aaggttgggcggccggatgagaaggccattgctgctgagcatcgtgtgctggacaatttt
tcagacctcgtggaaggggtggattttgacaaggattgtgaggacccagaatatcgtcca
cttcacttacaaagggatcaggatgaggagggtgatatgatgatggacgaagagatctca
gtggtggatggtgaagaagcccaggcaccacttccaggtcgcctgtgctggcccccaggc
tcagctttgacggcccgcctgcgccgcctcatcacagcctaccagcgcagctttaagcgg
gagcaagcgaagattgaagctgcagagcgaggagaccgccgcaaacgtcgttgtgaagct
gctttcaagttgaaagagattgcaagacgggagaaacaacagaggtggacaaggcgagag
gagtctgaattctatcgggtagtgtcttcatttggtgtggagtacgacccagacacccag
cagtttaactgggatcgctttcgctctttcgctcgtcttgacaaaaagactgatgccagc
ctggtgaagtacttccttggctttgttgctatgtgccggcaggtttgccgacttccccca
gtagcaggagacgagtccacggaccacacacttttcattgagcccatcacggaggagagg
gcatcccggactttgtatcgcgtggagctactgcgtcgcttacgggaacaggtgctttgt
catcccctgctgcaagagcgtttggcgctgtgccagcctggttctgatctgccagagtgg
tgggagtgtggtcgccacgatggagagctgttgcggggggccgcccgacatggcgtgagc
cgagcagactacagcatcatgcaagaccctgagctatctttcctgacatctcgtcaggcc
tatatccaaagtcgcccagcaccctcgcgctgctcaaccccactgctgcaccaatcgttg
tcgcttaatgattcacataatgtgtcacctcttactcttgcacttgaaactcgccgagat
ggcagtgctgaagagataaagcagcatgctctggagagtctgtctgtgaagctggaggcc
gaagtggcggcagaggcggcagctgcagcagctgcagagtctgtgacactcgttcgaggt
tttgttgggcctcatcgagggggtccattgcccatacaaaagatgtctgctgctggtgaa
aatgactctgactcggagctggacctaacaaagatgtctgcttccacctctgcatcctcc
actttgtcatccgatgacagtgatgaagaaaagataaaagctattgatgtgccacgtgcc
agtctgtacgacgacgaaagtctcctgtcactgagcatgtcccaggatggatttcccagt
gctattagtgagcgatctgccaccgatttgttacaggaaaagcatcgtatttctgagtgg
cctaaggaccgggtgttgataaaccgcatcgatctcgtctctcaggcagtgctgacaggg
aagtggccgagtccccggcgtacaccagagtccattatcagtgtgcaaccacagggaacg
gttcctttctcccctgacacctcccactcgactggggcatgtgatgattcctttgccaca
acacctcgcagtagtaacttggaggatgaggctgcctcccagttcactaagctccgtcgg
ggaatcgatgagaaagagttcactgttcagatgaaagatgaggagggtctaaagatgaca
ttccaaaagcatcgtatgctggcaaatgggggagtctcagatggtcaccttctctttcgc
aaaaagaaggggagtaagaagaagaccactgagctgaaggtggagcggatggcagagcca
ctgtggcaggaaccctggatagacatagaagccaggattccagtggtgaacaatcagggc
aagttgctgctaggagaagatgcaccacggcgctgtgagctggagtcctggctacaagga
catcctgagttttctgtagacccacggttcctagcttacatggaggaccgacggaagcag
aagagacaccgtgtcaagaaaccaaaaaaactatcccacagtgatttctctggagtggaa
catgtgcagcccgcccactatcggaatgagaagaagggccatctccccgagactatattt
gatcgcctccacccgggaccaaaggtgaaagaggatggcaagaaaaggagcaaacggcca
cgccacgattttgccaaaatggtggcactgatgcaaagaggaggaagtgcaggtagcatg
agcagtacagtctgtggagctatggatcgtcttttagctggtcctggcaacgcttccctg
catgacttccagaatcgtggcctgatgcctgtacccgttatgagcagaaggctggaccac
cagcaccacactgggagcagcggctcaggtcttccattcatgcagtatggtggagcaagt
ggggccagtgggcacctggactcagcagatctggggcttctgcacccagcaggactaaac
agcttagcgtaccaccaaccacacctccatcattcaccagctggcgacctgcggagacga
gggttggaagcagaggaggtggaggatggagaggtggatgacttatctcaggattatgat
agctcagagagagacttctccctcattgatgatcccatgatgccagcaaactctgattct
agtgacactgatgagaactga
DBGET
integrated database retrieval system
