Pleurodeles waltl (Iberian ribbed newt): 138299957
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Entry
138299957 CDS
T10800
Symbol
LRIG2
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
Ig_2
ig
LRR_5
LRR_4
LRR_1
V-set
C2-set_2
LRR_9
Ig_5
C1-set
C2-set_3
LRRCT
LRR_EndoS
DUF4781
LRRNT
Motif
Other DBs
NCBI-GeneID:
138299957
NCBI-ProteinID:
XP_069094791
LinkDB
All DBs
Position
6:537100997..537267485
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AA seq
1089 aa
AA seq
DB search
MAVAPCASLLLLFLLPLRTPASCPARCSCGDKLTDCSRGKLSRLPGQIPTGTTILDLSHN
RFTTSNSTLSLDLNTLEEVKMNYNELSAIPYFGEATFNITLLSLVHNKITNLDDEQLRFY
VSLEILDLSSNLISEVKASSFPRMQLKHLNLSNNRISILEAGCFDNLSSSIVVVKLNRNR
IAKIEPKSFRLPHLQHLELKRNKIKMIESLTFQGLESLKSLKMQRNGISDLMDGAFFGLD
NMEQLELESNNLTELNKGWLYGLRSLQQLYVSQNSVQRISPDAFEFCQRLLELELSCNQL
TRLDESAFVGLSSLEILNLADNRVAHIAEGVFRSLPTLQKLDLRNNAISWAIEDSNEAFA
GLQKLNTLILQGNKIKTITKKAFTGLESLKHLDLSNNDIMSFQENAFAHIELQQLKLNTS
SLLCDCQLKWFLQWLVDRKLQHSVKVSCAHPERLAGQSIFSVSSDDFVCDDFPKPQIRLH
PETTVALKGKNVTLTCSAASSSDSPMSTTWRKDSELLHDAEVENFARYQQQGAEVLEYTA
ILHLFNVNFTDEGKYQCVVTNHFGSNYSSKAKLTVNELPTFLKTPMDLTIRTGAMARLEC
AAEGHPPPQIAWQKDGGTDFPAARERRMHVMPEDEVLFIADVKIEDMGLYSCMAQNIAGS
ISVNVTLTVLETPSFIRPLEDRTVSRGETAVLQCIAGGSPPPRLNWTKDDGPLAVTERHF
FAAGNQLLIIVDAGPEDAGKYTCIMSNTLGTERGHIYLNVISSPNCDLSPNTVGYGDDGW
TTVGIVIIVVVCCVVGTSLVWVIVIYHMRRKNEDYSITNTEEMNLPADIPSYLSSQGTLS
EPPEGYSNSEAGSHQQLMPAVNGYVHKGTDGLYMDTGSETDTDLINTPFPHPGQGLMGPV
YNSRNSFHPGEPRELLGQLPIPSSTGQLLICSDCYDNANIYSRTRDYSPYPYIAQEDPLD
PTLSNLMTQIPKENYMTHSQHEVVTLSNVMAERDMSIFLTNHDRMGDPRCNNDLFEQQLW
GNSNNIGIPHAQFSHPSVELQENPQPFGTSCVAEANGEITISPRSCLRGHEQNCDLNRTQ
TIQDYRETT
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgctccctgcgcctctcttctgctgctttttctgttgcccctacgcactcct
gcctcctgcccggcccggtgttcctgtggggacaagctcaccgactgcagtcggggcaaa
ctctctcgtcttcccggacaaatcccaacgggcactaccatcctggacttgagtcacaac
cgattcaccacatcaaattccactctctctttggatcttaacacacttgaagaagtaaaa
atgaattacaacgagttaagtgcaattccttactttggcgaagcaactttcaacataacc
ttgctctcactagttcacaataaaattacaaatctagatgatgaacagctccggttttac
gtttcactcgaaattctggatctgagttccaacctcatttcggaagttaaagcttcgtct
tttccgcgaatgcagctgaagcacctgaacttgagcaataacaggatatccattctcgaa
gcaggctgttttgataacttatccagctcaatagtagtagtgaaactgaacaggaaccgg
atagcaaagatagagccgaaaagtttcagattgccccaccttcaacatctagaacttaaa
cggaacaagattaaaatgatcgaaagtctaacctttcaaggactggagtctttaaagtct
ttaaaaatgcagcgtaatggcataagcgatctcatggatggagctttctttggtctagat
aatatggaacagttggagctggagtccaataacctgacagaacttaacaagggatggcta
tatggcttgcgatcattgcagcagctctacgtcagccaaaattctgtccagaggattagc
ccagatgcctttgagttttgccaacgactgctcgaactagagttgtcatgcaatcagttg
actcgtttagatgagtctgccttcgtaggattgagttcactggaaatattaaaccttgca
gacaatcgagtggcacatatagctgagggtgttttcagaagccttcctactcttcagaag
ttggatttaaggaacaatgcaatttcatgggccatagaagattcaaatgaagcgtttgct
gggctccagaaactcaacactttaatcttacaaggaaacaagataaagactattaccaag
aaagcatttactggccttgagtcacttaagcacctagacttgagcaataacgacataatg
tcctttcaagaaaatgcatttgctcatattgaactccagcagctgaagttaaatacaagc
agtttactctgtgattgtcaactgaaatggtttctccaatggctggttgacagaaagttg
cagcactctgtcaaggttagctgtgcccaccctgaacgacttgctggccaaagtattttc
agtgtgtcctctgatgactttgtgtgtgatgattttccgaagcctcaaatcagattgcac
ccggagaccacagtggctttaaaaggaaagaatgtgactcttacctgcagtgctgccagc
agcagcgattcgcctatgtccactacttggcgaaaggacagcgaacttctgcatgatgca
gaagtggaaaactttgcccgatatcagcagcagggtgcagaagtcttggagtacacagct
attttacacctctttaatgtgaactttacagacgagggaaaataccaatgcgtggttaca
aatcactttggttccaattactccagcaaagccaaactcactgtcaatgagttgccaact
ttcttgaaaacacccatggacttgactataagaactggtgccatggctcgcctggagtgt
gctgccgaagggcacccaccgccccagattgcatggcagaaagatggtggcactgatttc
ccggcagctagagaaagacgtatgcatgtcatgccagaagacgaggtcttattcattgca
gatgttaaaattgaagacatgggactctacagctgcatggcacagaacattgcaggaagc
atctctgtgaatgtcaccttaactgtgttagagaccccatcattcataagacctctagag
gatagaacggtgtccagaggtgaaactgctgtgttgcagtgtattgctggaggaagtcct
ccccctcgcctgaactggaccaaagatgacgggcctctggccgtaacagaaaggcatttc
tttgctgcaggcaatcaactgcttataattgttgatgcagggcctgaggatgctgggaag
tatacatgtatcatgtccaatactcttggcacagagcgtggacacatctaccttaatgta
atttcgtcccccaactgtgacttatctccaaatacagttggatacggagatgatggctgg
accacagttggtattgtgatcatcgtagttgtgtgctgtgttgtgggcacctctctagta
tgggtcatcgtaatataccacatgagacggaaaaatgaagactacagcataacaaacaca
gaagaaatgaacttgcctgcagatattcccagctacctatcttcccagggaaccttgtct
gaacctccagagggctacagcaactctgaagctggcagtcatcagcaactcatgcctgct
gtaaatggatatgtgcacaaaggaacagatggactctatatggatacaggtagcgagaca
gatacagacttaataaacactccattcccgcatcctgggcaaggcctcatgggaccagtg
tacaacagcagaaacagcttccatccaggagagcctagagaattgctaggacaacttcct
atcccaagtagtacaggacaactcctaatctgttcagattgttacgacaatgctaatatt
tactcacggactagagactatagtccttacccatatattgcacaagaggatccgttggac
cccacattatccaatttgatgacgcagatcccaaaggaaaactacatgacacactctcag
catgaagttgtgactctcagcaatgtgatggcagaaagagacatgtccattttccttacc
aaccatgacagaatgggtgatccaagatgtaacaatgacttatttgaacagcagttatgg
ggaaatagcaacaatataggaattccacatgcacaattttcgcatccatctgttgagctt
caagagaaccctcaaccttttggaacttcgtgcgtggcagaagcgaatggagagattacc
atttctcccagatcctgcctgagaggacatgagcaaaactgtgatttaaacaggactcag
actattcaagactacagggaaaccacctaa
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