Pleurodeles waltl (Iberian ribbed newt): 138300010
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Entry
138300010 CDS
T10800
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04512
ECM-receptor interaction
Brite
Lectins [BR:
pwl04091
]
C-Type lectins
Lecticans
138300010 (FREM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138300010
NCBI-ProteinID:
XP_069094919
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Position
1_2:317894422..318578488
Genome browser
AA seq
2190 aa
AA seq
DB search
MKPFRNGQLILLSVCSFLVLPYSSQSFVKVNRGIRVMKGQSAFLSQEDLQFSFPREKDAC
KVEVVMNEPITQRVGKLTPQVFDCHFLPDEVKYIHNGCPILDEDEVMLRLYRFTETETFT
ETFPLRVKLLEPDCNIITPGSKPLEVHEFYGLSNEIDKNVLRIQYDKTQTLECAIRLTSL
ETFVPAHGQVVIGEPEKDEPRGDQPHSFFPRSKHRTNGKCKKGYCSTGLRKIQTSLKVSC
EEFLLNGFRYEHLDPPSPDTDYISIRLDLIDIRSKTIHKSEHAWIPVQIKGAIPNQIPRA
AFMATFILEVDQFILTPLTTAALDVEDGETPKSLLVLNITEPPLQGFITHLSDQTKPVTS
FTWKDLNEMLIAYQPPNCSHTERRNYEAEFEVHDLFFERSSPITIHISIRTADTIAPRVS
WNMGLDLLEGQSRPITWEQFQIVDNDDINAVRLVVMDGLQHGRITVGGGKGFMFMVKDIK
NGVALYHHDDSDTSKDFVVFRIFDGRHSIRHKFPINILPKDDSPPFLVTNVAFEVCEGQT
VLIDGSMLQASDLDSSDDYIVFKITKPSQAGEIMKKPGPDHLGYPVLSFLQRDLFNGIIY
YRHHGGEVFQDTFEFVLSDSHDLPNLSEPQAVIVHITPVNNQLPKEVPGTVRHLLLKETE
VVLLTKKHLHFIDIESPERELTYAIITPPFFTSSSSLSDAGKIVFVESAPKLMKNHAATA
LTTFTQHAVNYMKIAYMPPIQDVGPEIQNIKFIFSVSNQHGGTLYGICFNITILPVDNQV
PEVFTNPLKVEEGGECTVTSDHILVTDADTKLESIALRLQRVPLHGVVHLNGEPVEKGGS
IQWGDIRTSKVRYQHDGSETLYDDVLFSATDGTNSAEFLLQIKVLPVNDEPPVMKDGLLP
TIDCPEGAEVVITSEYIYATDADSDDMRLMFMIARQPHYGVVQKEGVVVDHFSQADVISE
TVTYLHTSGEIGLTTCFDTITLVVSDGEAGADGGACCIGRPWSPSIPNHDSFPVYDINIT
VYPVDNQPPSIAIGNVFFVDEGGSAAITEKHLRVTDPDTEENDLKIILLSPPRFGYIENT
LPSPGFEKSNMGISIAAFQVKDMKGLHINYVQSRHIRIEPTSDQFLIYVSDGAHRSVELP
FYVIINPVNDEVPEFLARNITVLEGQAKELDPAVINAVDVDVPRNPLMFTITEQPQHGLV
MHGVYGNDITRYKRIISSHQSPGLPLHDFSMDHLKNGMNVMYMHDDSESLADRFTVQLFD
GKHMVERTLSVTILPVNDEKPELVRNNGIEVNMGDRCLISSVVLSAEDKDTPSEKIFYVF
ETLPENGELQIKKHQTWVSLQKGMNCTQDDIDMNLLKYVHTGAMGSKSQDSVTFYLWDGD
NRSPALHFYIIIKDMEKGDIAVFARPLNVSKGDRGLLTTDVLLAVDGTDKPEELLFEVTS
PPQYGQLEYVSYPGVGITSFSQMDVAAQTVCYVHSSKAAPAKDTFRFLVSNGLRTKHGTF
DIMLETADRALPAVSRNKGLRLMEGAMALISPQLLQLSDPDTPPQNLTFLLAQLPQYGQL
HRRGSLLLQLNFTQQDVDNLDIAYRHGGGDSQIDRFTFVATDGSNQGFLINEKVQGEPVA
FTIQVDRVDKSAPRIAHIQNPSTVELLKNERYGIYITSKDLKASYPGTEDGEIIFRILRG
PHYGYLENITSGGFIREQFTQRDLNGKTILYVIDPFLEINSDRLELQVMDLRGNKAPSQI
LELKWSKVEFLQHDYEVCENVGLVALKIVRTGTPKDSAFIAIKVNGVSAKDGEDFTSSPS
KLIQFDPGVSTKTWNIAINRDGLEEDEEIFEVVLSSPVNTVLGTRTKAVVKIVDPRGGEC
KSIHSSALKKDIVWGADTLLSVSRHLSRPGTVHLERNPLPVPKETAVHTRGDTPTPKDFD
TQRRPKARLRAIGNGRTVRPSSVSRNGTDVVFTYHGLVSLRVEEDAPLSRLNKEAKVLVY
NRGQERHSVDSARKTEILQADRTGLASSSYVSSKDQILTFPKACTTDLNGLLHFEEETQR
LFQCDGVSWKVWNSGTQDANMKRCPSGWTRHGSSCYFLSTEHKVTWSAAARACRERFLGE
LVSVFNKNHMEWLWDFSGRKPFWIGLNDQVSASQWEWNGGEAVTFTNWRRGPPRLSKKGR
NCVLVHRRGKWQAKNCKKGKGHNFICTRKL
NT seq
6573 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttaggaatggccagctgattctcctttcggtttgctcttttcttgtgctg
ccctattccagccaatcgtttgttaaagtcaaccgtgggatcagggtaatgaagggacag
tcggcgttcctgtcccaggaagatctgcagttttcctttccacgtgagaaagatgcatgt
aaagtggaggttgtgatgaatgaaccgataacacagagagtcgggaaactgacaccccag
gtgtttgattgtcatttccttcctgatgaagttaaatatattcataatggctgccccatt
ttagatgaagatgaagttatgcttaggttgtacaggtttacagagacagagacattcaca
gaaacctttcctctgagagtgaagctacttgaacctgactgcaatattataacaccgggc
tcaaagcctctggaagtccatgaattctatggcctttctaacgagattgataaaaatgtg
ctgcgtatccagtacgacaagacacaaactctggaatgtgccatcagactaacctccttg
gaaacatttgtgccagctcatgggcaggttgtcattggagagcctgaaaaagatgaacca
cgtggtgatcaacctcacagtttttttcccagatccaagcacaggaccaatggaaagtgc
aaaaaaggatattgttccaccggtctgaggaagatccagacttctcttaaggtcagctgt
gaagagtttctgctcaacggattccgatatgagcaccttgaccctccctcacctgacact
gattacatttccatcaggctggaccttattgacatcaggagcaagacaatacacaagtca
gaacacgcctggataccagtgcagatcaaaggggctattccaaatcagatcccacgtgca
gccttcatggccacattcattttggaggttgatcagttcattttgactcccctgacaaca
gcagcgctggacgtagaggatggtgaaacgccaaagtctcttcttgttctcaacatcacc
gaaccaccactccagggtttcatcacacatctgtccgatcaaacaaagccagtgacatcc
ttcacatggaaggacttgaatgagatgctcattgcctaccagcctccaaactgcagtcac
acagagaggagaaattatgaggcggagtttgaagtgcatgatttgttctttgaaaggagt
tctccgattactatacatatctccatccgaacagcagataccatcgctcctcgagtttca
tggaacatgggcttagatctccttgaaggccagtcccggcctatcacatgggagcagttt
caaattgtggacaatgatgacataaatgcagtgcgcctcgtcgtcatggatggcttacag
catggacgaatcactgtaggaggtggaaaaggttttatgttcatggtgaaggatatcaaa
aatggagttgctctttaccatcatgatgatagtgatacctcaaaagattttgtggtcttt
cgaatttttgatggccgccacagtatcaggcacaagtttcctatcaacattcttcctaag
gatgacagtcctcccttccttgtcactaatgtggcctttgaagtatgtgaaggccagaca
gtgcttattgatggatcaatgcttcaagcttcagacctggactccagtgatgactacata
gtatttaaaatcacaaaaccatcccaggctggagaaatcatgaagaagccagggcctgat
caccttggttaccccgtcctgagcttcctgcaaagagacctcttcaatggaattatatat
tatcgtcaccatggtggagaagtgttccaagacacatttgagtttgttctgtctgacagc
catgatctacccaatctctcagaaccacaggctgtaattgtgcacatcactccagtaaat
aaccagcttccaaaagaggtgccagggactgttcggcatctgttgctgaaagagactgag
gttgtgcttcttacaaaaaagcacctacatttcattgacatagagtcacctgagagggag
ctcacttacgccataatcacacctccattcttcacttcctcatccagtctttcagatgct
ggtaagatagtttttgtggaaagtgcacccaaattgatgaagaaccatgctgccactgcg
ctaacgacttttactcagcatgctgtgaattacatgaagattgcctacatgcccccgata
caggatgtaggtcctgaaattcagaacattaagtttattttctctgtcagcaaccagcat
ggagggacactgtatgggatctgtttcaatataaccatcttacccgtggataatcaagta
ccagaggtgttcacaaaccctctaaaagtggaagaaggtggagaatgcacagtcacttct
gatcatatactggtcactgatgcagacacaaagctggaaagcatcgccctacgacttcag
agagtaccgctgcatggggtagtgcatctcaatggagaaccagtagagaaaggaggcagt
atccaatggggtgacataaggacgtctaaagttaggtaccaacatgatggttctgaaact
ctgtacgatgacgtcctcttcagtgccacagatggtacaaattctgcagaattcctcctc
caaatcaaggtgctgcctgtgaatgatgaacctcctgttatgaaggatggtctacttcca
accatcgactgtccggagggagcggaagtagttatcacctctgagtacatttatgccacg
gatgcagacagcgacgacatgaggctgatgttcatgattgctcggcagccacactatggg
gtggtgcagaaagagggagttgttgttgatcacttctcccaagcagatgtcatttcagaa
actgtgacttacctgcacacaagtggagagattggcttgactacctgctttgacacaatc
acccttgtggtgtctgatggtgaggcgggtgccgatggtggcgcttgctgtattgggcga
ccttggtctccttccattccaaatcatgactcatttccagtttatgacattaacattact
gtgtatcctgtggacaaccaaccgccatcaattgcaatcggtaacgtgttctttgtggat
gaagggggctccgccgccattactgaaaaacacttgagagttacagatccggacacagaa
gaaaacgacttgaagattatcctgctctctccgcctcggtttggctacattgaaaacacc
ctcccttccccggggtttgagaagagcaacatgggaataagtatagctgcatttcaggtg
aaggatatgaagggcttgcacataaactatgtgcagtccagacacatacggattgagccc
accagtgaccagttcctgatttacgtcagtgatggagctcatcgctcagtggagttgcca
ttttatgtcattatcaacccagtcaatgatgaagtcccagagttcctggcaagaaatatt
actgttctggaaggtcaagcgaaagaacttgacccagcggtaataaatgctgtggatgtg
gatgttcctaggaatcctttgatgttcacaataacagagcaaccacagcacggacttgtt
atgcatggagtttatggcaatgacatcacacgctacaaacgaataatcagcagccatcaa
agtcctggacttccattgcatgacttctcaatggatcatctaaaaaatggaatgaatgtg
atgtacatgcacgacgactccgaaagcctagctgacaggttcacagtgcagctcttcgat
gggaagcacatggttgaacgaaccctctcagtgactatccttccagttaatgatgaaaag
ccagaactggtcaggaataacggaatagaggtgaacatgggagacagatgccttatttcc
agtgtggtgctttcagccgaagataaagacactccaagcgaaaagattttttatgtattt
gaaacacttcctgaaaatggagagcttcaaatcaagaaacatcagacatgggtgtccctc
cagaaaggcatgaactgcactcaggatgacatagacatgaatctgctgaaatatgttcac
accggagcaatgggatcgaagagtcaagacagtgtcaccttttacctctgggatggagac
aaccgttccccagctctacacttctacattattatcaaggacatggagaaaggggatatt
gccgtctttgcacgaccacttaatgtgtcaaagggcgacagaggcttgttgacgactgat
gtactgttggctgttgatggaacggataaaccggaagaactgctgttcgaggtcacttcc
ccaccccagtatggacagttggagtatgtcagctatccaggagttggcattaccagcttc
agtcagatggacgtggctgctcagactgtttgctatgtccacagcagcaaagcagctcct
gcaaaagatacgttcagatttcttgtgagcaatggactgcggaccaagcatgggaccttc
gacatcatgctggagacggctgaccgagccttacccgcagtgtccaggaacaagggctta
aggttaatggaaggtgcaatggccctcatctccccccagctcctgcagctctcagatccg
gacacccctccgcagaaccttactttcctcctggcacagctcccacagtacggccagctt
caccgcagagggtccttgctactgcaactcaacttcacccagcaagatgtggacaacctg
gacattgcctacagacatggcggaggagattctcagattgacaggttcacctttgttgcc
actgacgggagtaatcaaggcttcctgatcaatgagaaagtacaaggcgaacccgtggcg
ttcactattcaggtggaccgtgtagacaaaagtgccccaagaattgcacacattcagaat
ccatccactgtggagctgctgaaaaatgagcgctatggcatctacatcactagcaaggat
ctgaaggcctcctaccctggtactgaagatggagaaatcattttcaggattttacggggt
ccacattatggctacttggaaaacataacctcaggtggctttattcgtgagcaattcact
cagagagatttaaatggaaaaacaatactttacgtgatcgatcccttcctggagattaat
tcagataggttagagcttcaagtcatggaccttagaggaaataaagctccttctcaaatt
ttggaattaaaatggtccaaggttgaatttctgcagcatgactatgaggtgtgtgaaaac
gtgggtcttgtggccttgaagattgtcagaacaggaactccaaaggactctgccttcatt
gcaataaaggtgaacggcgtatctgcaaaagatggagaagactttacctcgagtccatcc
aagctcatccagtttgatccaggggtgtcaaccaagacgtggaacatagcaattaaccgc
gacggcttagaggaagacgaagagatctttgaagtggtgctgagctctcctgtgaatact
gttcttggcaccagaacaaaagccgtggtgaaaattgtggaccccagaggaggtgaatgt
aaatctatacattcctctgctctaaagaaggatattgtgtggggtgcagatacactgctc
tcagtttccaggcacttatcgcgtcctggtactgtgcacttggaaagaaatcctctccca
gtcccaaaagagacagcagtgcacactagaggagatacaccaacaccaaaggacttcgac
acacagaggcgcccaaaagctcggctcagggcaatcggaaatggcagaacggtgcgacct
tcatctgtctctagaaatggaaccgatgtcgtatttacataccatgggcttgtgtcactt
agagtggaggaggacgccccactctccaggttaaacaaggaggccaaggtgttggtgtac
aacagagggcaagagaggcacagtgtggattctgccaggaagaccgagatactgcaagca
gacaggacaggcctggcttcttcgtcatacgttagcagtaaggatcagattctgaccttc
ccaaaggcatgtaccacggatttgaatgggcttctgcattttgaagaagagactcagagg
ctatttcagtgtgatggggtttcctggaaggtttggaactcaggaacgcaggatgccaac
atgaaaagatgcccatcgggttggacccgtcatgggagcagctgctattttctcagcacg
gaacataaagtcacctggagcgcggctgctcgggcttgccgggaacggttcctgggagag
ctggttagtgtgttcaataaaaaccacatggagtggctgtgggacttcagtggaagaaag
cctttctggataggtttgaatgatcaagtgagcgcaagccagtgggagtggaatggaggc
gaagccgtcacatttacaaactggaggcgaggaccccctcgactttcaaagaaaggaaga
aactgtgttttggtgcacaggcgaggaaagtggcaagcaaagaactgcaaaaagggaaaa
ggacataactttatttgtacaagaaaattatag
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integrated database retrieval system
