Pleurodeles waltl (Iberian ribbed newt): 138300042
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Entry
138300042 CDS
T10800
Symbol
SARS1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138300042 (SARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pwl01007
]
138300042 (SARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138300042 (SARS1)
Enzymes [BR:
pwl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
138300042 (SARS1)
Amino acid related enzymes [BR:
pwl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
138300042 (SARS1)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138300042 (SARS1)
Prokaryotic type
138300042 (SARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
138300042
NCBI-ProteinID:
XP_069094977
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All DBs
Position
6:604649935..604725547
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AA seq
555 aa
AA seq
DB search
MRRAWWCACVLLPFSLVTYCGAGRILTRTEQRREIESLRSRDKMVLDLDLFRADKGGDPE
AVRETQRKRFKDPGLVDRLLQADGAWRRSRFQADNLNKLKNLCSKTIGEKMKKKEPAGDD
ETIPENAQNLDDLTAEILAGLTVTQIKRLRVLIDEAIEKGNAERIKLEADRFENLREIGN
LLHPSVPISNDEDNDNRVERTWGDCSVRKKYSHVDLVVMVDGYEGEKGAIVAGSRGYFLK
GVLVFLEQALINYALQTLGSKGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEK
SEDSSVDEKYLIATSEQPIAALHRDEWLKPEDLPIRYAGISTCFRQEVGSHGRDTRGIFR
VHQFEKIEQFIYASPHDNKSWELFDEMIGTAEEFYQSLGIPYRIVNIVSGSLNHAASKKL
DLEAWFPGSSAYRELVSCSNCTDYQARRLRIRYGQTKKMMDKVDFVHMLNATMCATTRAI
CAILENYQTDDGIVVPEKLRHFMPPGMKELIKFVKPAPIDVEISKKQKKQQEGTKKKPSA
AVLEDQMQNMEVNDA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtgcttggtggtgcgcatgcgtgttacttcccttctccctggtcacttactgc
ggtgccggtaggattttgacaaggactgagcagcggcgtgagatcgagtccctgaggagt
cgcgacaagatggtgctggacttagacctcttccgtgccgacaaaggcggagacccagag
gcagtgcgggaaacccagcgcaagcgattcaaggatccggggctcgtggaccgactgctg
caggctgacggggcctggaggcggagcagattccaggcagacaatctgaacaaactgaag
aatctgtgcagcaagacgataggggaaaaaatgaagaaaaaagaacccgctggggatgac
gagaccatcccagaaaatgcacaaaaccttgatgaccttactgcagagatccttgctggt
cttacagtaacgcaaattaagaggctgcgtgttctcatagatgaggccattgagaagggt
aatgcagagaggataaaattggaagctgatagatttgaaaatctgcgcgagattggaaac
cttctccatccctccgtgcccattagcaatgatgaggataacgataacagggtggagagg
acctggggtgattgcagcgtgcgtaagaagtactctcatgttgaccttgtggtaatggtt
gatggttatgaaggagaaaaaggagctattgtggccgggagtcgaggctacttcctgaag
ggtgtcctggttttcttggagcaggccttaataaattatgctctgcagactctgggcagc
aagggttataccccgatctacactcctttcttcatgagaaaggaagtgatgcaggaggtc
gcgcagctcagccagtttgatgaggaactgtataaggtgattggaaaaggtagtgagaaa
tcagaggacagttcagttgatgaaaaatacctgattgcaacttcagagcagccaattgca
gccctgcaccgagacgagtggctgaaaccagaggacctgcccattcgctatgctggtatt
tcaacttgtttccgccaggaggtcggttctcatggccgagacaccagaggcatcttccgg
gtgcatcagtttgaaaagatagaacagtttatctatgcatcaccccacgataacaagtct
tgggaacttttcgatgagatgattggcacagcagaggagttctaccagtcccttggcatc
ccttaccgtattgttaatattgtctcaggttcgctgaatcacgctgctagcaagaagctg
gacctggaggcctggttcccaggctcgtctgcataccgagaacttgtctcctgctcgaac
tgcacagattaccaggctcggcggctacggatccggtacggacagaccaagaagatgatg
gacaaggtggactttgtgcatatgttgaacgccaccatgtgtgccacaacgcgagcaatt
tgtgccatcctggagaactaccagacggacgatggcattgtggttccagagaaactgcgg
cacttcatgccacccggaatgaaagagttaattaagtttgtgaaacctgcacctattgat
gtggagatttcgaaaaaacagaagaagcaacaagaaggaaccaaaaagaaacctagtgct
gcggtgttggaagatcaaatgcagaacatggaagtaaatgacgcttaa
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