Pleurodeles waltl (Iberian ribbed newt): 138300102
Help
Entry
138300102 CDS
T10800
Symbol
PPFIA4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138300102 (PPFIA4)
Membrane trafficking [BR:
pwl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
138300102 (PPFIA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
GreA_GreB_N
Motif
Other DBs
NCBI-GeneID:
138300102
NCBI-ProteinID:
XP_069095104
LinkDB
All DBs
Position
6:complement(651282159..654387417)
Genome browser
AA seq
1203 aa
AA seq
DB search
MMCEVMPTINEGDPNGLQTDSQNGSESDSNFEQLMVNMLDERDKLLEALRENQETLFLTQ
SKLQEINHEKEQLHRQLSAALPQEFATLTRELNVCREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRAA
LERVGALEEQLAAACQERLHNGSMHPEDEVGRVVELKELLEKQNFELCQAKDRQSSLSAR
VSELEEDLATARKDLLKSEEMNVKYQRDIREAMAQKGDMERRIATLEKRYLAAQREATSI
HDLNDKLENELVNKDSLHRQCEEKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRV
AALTKAEERHGNIEEHLRQLENQLEEKNQELARARQREKMNEEHNKRLSDTVDRLLTESN
ERLQLHLKERMASLEEKNALMQELESTQKQIELYQHDKGRLTEEMTKLRLEVEQLKARSG
TFMESVHPRSHIGSATELRYSLTSLVDPKAESLGTSPVLRRAQKGRLTALQEQPVKDWDQ
TPPASVITSVVHFDSDPELSDIDDDDERDTVFGSVDMISPSGHSDAQTLAMMLQEQLDAI
NEEIRMIQEEKESTELRAEQIENRVSSGSMDGLNLTQHRKRTSIPTSLTALSLASPSPSV
SGQSTPKHYSRGSTHDLDRMGIMTLPSDLRKHRRKVLSPVSREESREDKATIHCETSPPP
SPRTLRLEKFGIQSIIQEDGRSSSADDQTSYPSSTNGSLDSLHKGPKKKGIKSSFGRLFG
KKEKGRLMQMSKDGMGQAFITDAEFTVHETVGLGKLGTQAEKDRRLKKKHVLLEEARRKG
MPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNALHRL
KLRLAIQEMVSLTSPSAPPTSRTSSGNVWVTHEEMENLTASTKTDKEEGSWAQTLAYGDM
NHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIM
CLKRLNYDRKELEKRREETQHEIKDVLVWTNDQVIRWIQSIGLKEYGNHLVESGVHGALI
SLDENFDHNSLALVLQIPNQNTQARQVLEREFNNLLALGTERRLDDGEEKSFRRAPSWRK
RFRPREFSGVHMMAGSTETLPAGFRVTTTMAPSTSIQPKQMSTEVGSAGSQRLEASAVRT
YSC
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtcatgcccaccatcaatgagggcgatcccaatggtttgcaaaccgac
tcccagaatggatcagagtcggattctaactttgagcagctaatggtgaacatgctggat
gaaagggacaagcttctggaagccttacgtgaaaatcaggaaaccctcttcttaacccaa
agcaaactacaggagatcaaccatgagaaggaacagcttcaccggcaactgagtgcagca
ctcccacaggaatttgcaacattgaccagggaattaaatgtttgcagagaacagcttttg
gagaaagaagaagagatttcagaattgaaagctgagcggaataatacacggctgttgcta
gaacatctcgagtgcctggtctcgcggcatgagcggtccctgaggatgacggtggtgaag
agacaagcgcagtccccgtcaggtgtgtcgagtgaggtggaagttttaaaggcactgaag
tccctctttgaacatcacaaagcgctagatgaaaaggtgcgagagcgcttgcgtgcagca
ttagaaagagtgggagccttagaagaacagctagcagctgcctgccaagagagactgcac
aatggctccatgcatccagaggatgaggtgggacgtgtggtcgagctcaaggaacttctt
gagaagcagaactttgagttgtgtcaggcaaaagatcgacagtcctcgttgtccgcccgt
gtgtcagaactcgaagaggatcttgccacagcccgtaaggatctcctcaagtcagaagag
atgaatgtgaagtaccagcgggacatccgtgaggccatggctcagaaaggtgacatggag
cggcggatagccaccctggaaaagcgatacctggcagctcagcgagaagccacatccatc
cacgacctcaatgataaacttgaaaacgagctggtgaacaaagactctttacaccgccag
tgcgaggagaaagctcgtcatctccaagagctgttggaactcgctgagcagaaactgcag
cagaccatgaggaaggcagagacattgcccgaggtggaagccgagctagcccagagagtt
gcggccctgacaaaggctgaagaaagacatgggaacatagaggaacatctcagacaacta
gagaaccagctggaagaaaagaatcaagagcttgccagggctcgacagcgggaaaaaatg
aatgaagaacacaacaagcggctttcggacacagtggacagattactgactgagtccaac
gagaggctccagctgcatctcaaggagcgaatggcatcactggaggaaaagaatgcctta
atgcaagaattggaaagtacacaaaagcaaatagagctgtatcaacatgacaaggggagg
ttaacagaggaaatgacaaaattgcgattagaggtggaacagctgaaggctagaagcggg
acattcatggaaagtgttcacccgagatcccacataggtagtgccacagaactgaggtat
tctctaacctccttggtagaccctaaagcggagtcccttggaacgtcacctgtattgcgt
cgagcacagaagggccgattaaccgctctgcaggaacagcctgtgaaggactgggaccag
actcctcctgccagtgtcatcacctccgtggtccactttgacagtgaccccgaactgtca
gacattgacgatgatgatgagcgagatactgtctttgggtcggttgacatgatttctccc
agcggacactcggatgcccagactctggcaatgatgctgcaagaacaactagacgcaatc
aacgaagaaatcaggatgattcaggaggagaaagagtccacggagctccgggcagagcag
attgaaaaccgagtaagcagcggcagcatggacggcctcaacctcacccagcatcgtaaa
agaacctcaatccccacgtccttaactgctctgtccttagcaagtccttctccttcggtc
agcggtcagtcgacgcccaagcattattcacgtggatccacgcatgacctggatcgaatg
ggcatcatgacactgcccagtgatttaaggaagcatcgacggaaagtgttgtcaccagtg
tcgcgggaagaaagccgtgaagataaggccaccatacactgtgagacatcacctcctccc
tcacccagaactctgaggctggagaaattcggaattcaatccatcatccaagaagatggg
agaagtagttcagccgacgatcagaccagttaccccagcagcactaacggcagcctggac
tccttacacaaaggtccaaagaaaaaaggaatcaagtcatccttcggccgcttgtttgga
aagaaagaaaaaggaagacttatgcaaatgagtaaagatggtatgggccaagcctttatc
acagacgcagaattcactgttcatgaaactgtaggtcttgggaaactgggcactcaggca
gagaaggaccggcggctaaaaaaaaagcacgtgcttttagaagaggctcggaggaaaggc
atgccgttcgcccaatgggatgggcccactgtcgtttcgtggttggagctgtgggtcgga
atgccagcctggtatgttgccgcctgcagagccaatgtgaaaagtggagccatcatgtct
gccttgtcggatactgagatccagagggagattggcatcagcaatgccctgcatcgtctg
aagctacgcctggccatccaggagatggtgtcgctaaccagcccgtcagcaccgccaacc
tccagaacgtcgtctggcaatgtctgggtgacacatgaagaaatggagaacttgacggct
tctacaaaaacagacaaggaagaaggcagttgggcacagacattggcttacggtgatatg
aaccacgagtggattgggaatgagtggcttcccagccttggcctcccacaataccgtagt
tacttcatggagtgtttagtggatgcacggatgttggaccatctcaccaagaaggacctc
agagtgcacctaaagatggtcgacagcttccatcggacaagtttacagtatggcataatg
tgcctgaagaggttaaactatgatcggaaggagttggagaaaagacgagaagaaacgcag
catgagatcaaagatgtgttggtgtggacaaatgaccaagtgatacgatggattcagtca
attggactcaaagaatatggaaatcatcttgttgagagtggtgtccacggagcccttata
tcgctggatgaaaattttgaccacaatagtctggcacttgtactgcaaatacccaatcag
aacactcaggcacggcaggtcctagagagagaattcaacaatcttctggcactgggcacg
gagcgaaggcttgatgatggtgaggaaaagtcctttagacgagctccatcttggaggaaa
agatttcgccctagagagttcagtggcgtgcacatgatggctggatcgacagagacactg
cctgccgggttccgagttacgacaaccatggccccttctacctctatccagcctaaacaa
atgtcaaccgaagtgggatccgcggggtcacagaggctggaggcgtctgctgttcgaacc
tactcgtgctga
DBGET
integrated database retrieval system
