KEGG   Pleurodeles waltl (Iberian ribbed newt): 138300112
Entry
138300112         CDS       T10800                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Brite
Enzymes [BR:pwl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     138300112 (KDM5B)
Protein phosphatases and associated proteins [BR:pwl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     138300112 (KDM5B)
Chromosome and associated proteins [BR:pwl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    138300112 (KDM5B)
SSDB
Other DBs
NCBI-GeneID: 138300112
NCBI-ProteinID: XP_069095127
LinkDB
Position
6:659066794..659835367
AA seq 1566 aa
MAGGIGAEFVPPPECPVFEPTWEEFVDPFAFISKIRPIAERTGICKVRPPPDWQPPFACD
VDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNRFV
AEYGGFDAVCRERRWTKIATRMGFSLGKAVGSHIRAHYERILYPFNLFQSGASLLAPETY
SQLMCLMDPATLEKCLQKQDFSHDTKDKEYKPHDIPQRQSVQPPDTCMPARRAKRMRAEG
INIKTEPVDEQEIKPHNLRRRMSCTKLNCEKGMETEVSTEKEAKVAVKQEPVEKMEPIAD
PEKTKPRKKRTSVIDLYVCLICGSGNDEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRC
PKCLAQECSKPQEAFGFEQAARDYTLRAFGEMADAFKSDYFSMPVHMVPTELVEKEFWRL
VSTIEEDVTVEYGADIASKEFGSGFPVSDGKFKVKPEEEDYIGSGWNLNNMPVMDPSVLA
HITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEEV
MKKLAPELFIAQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRAYHSGFNQG
FNFAEAVNFCTVDWLPLGRQCVEHYRELNRYCVFSHDEMICKMALKAATLDVVLASTVQK
DMAVMIENEKVLREAVRQLGVIESERMDFEELADDERQCVKCKTTCFISCVSCPCSPGEL
VCLYHVKELCACPVYKYKLRYQYTLDDLYPMMNSLKLRAESYNRWASVVKEALEVKCGNK
KSLSDFKDLIEESQVKRFPDNDLLRHLRLVAQDADKCASVAQLLLKGKRQTRYRSGGGKS
QNLLTVNELQSFVKQLYALPCVISETPLLKEHLTRVEDFLQQSQRLLSEEIPNTSEILDL
LDVSFEFDIELTQIGELRKRLEQVRWLQDVNRACSNPSSLTLDDMRRLIDLGVGLAPHVT
VEKAMARLQELLTVSEHWDDKARSLIKARPHSSISVLAAALEEVENVPAYLPNGVALKDA
IQKAKEWQQEVDTIQASGRVPVLDNLMELVSRGRSIPVHLDFLPRLESLVSEVQTWKESA
SSTFLTPDLNFSLLEVLCPRCDVGVVALKRKQKKLKEPPGLSGKKVFVKLESLADLERAL
SESKDTAAAMATLGEARLREMEALHALRTLNEQKLLSSEEDLDWRVCVCQEAPASPMIQC
ELCRGSFHTRCVTLPSVQQGQRVWLCPQCHRSQKPPLEKILPLLASLQRIRVRLPEGDAL
RFMIERTVNWQHRAQHILSSGNIALLLDSCGTGQLYNRWQATAGQLPETNKVSQTVGAMS
FSLAHEWDNRTAYIQSPFSPGRNCIPLHGLSAELEEVLMEAQSLQVSLPEIQELYHILFM
QQQQQFAEQSKHISSLWIPSEKNPVECIEERGPQQGEIECAIKDVLTSVERKLKRQHERR
HFFGKKHRVKRMVAPKKIKLNQSKDLNMNRLDTPEEQLHEVPVLSESHSSSGDLSYSEGD
DSDDEDAVCPAPDCQQPEGEEVDWVQCDGSCNQWFHQVCVGVTSEMAEKEDYVCIRCTAN
SVMNRK
NT seq 4701 nt   +upstreamnt  +downstreamnt
atggccggcggcatcggggcagagttcgtgccgcccccggagtgccctgtgtttgagccc
acctgggaggagttcgtagacccctttgcctttattagcaagatccgaccgatcgccgag
aggaccgggatctgcaaagtgcggccaccgccggactggcagccaccgtttgcgtgtgat
gttgataaactccacttcactcctcgcatccagaggctgaatgaattagaggctcagacc
agagtgaaacttaacttcttggaccagattgcaaagttttgggagttacagggatgcacc
ctaaagattccacatgtggagaggaagattttggatttgtatcaactaaatcggtttgtt
gcagaatatggtggctttgacgcagtctgccgggagaggagatggaccaaaatagcaaca
agaatggggttttctctggggaaagcagtgggatcccacatccgagcccactatgaacgc
attctatatccattcaacttgtttcaaagtggagccagccttctggcacctgaaacatat
tcccaactgatgtgtctaatggatcctgcaactctggaaaagtgtctgcagaagcaggat
ttcagccatgacacgaaggataaggaatacaagcctcatgatattcctcaacggcagtct
gttcaaccaccggatacatgtatgccagcgaggcgagcaaagcgcatgagagccgagggc
atcaacattaaaactgagccagttgacgaacaagagatcaaacctcataatctgagacga
agaatgtcctgcacaaaactcaactgtgagaaaggtatggaaactgaagtgtctacagag
aaggaagctaaagttgcagtgaaacaagaacctgttgagaaaatggaacccatagctgat
ccggagaagaccaagccacgtaagaagcggacgtctgtgattgatttgtacgtgtgcctg
atttgtggcagtggaaacgatgaagatcgtcttttgctgtgcgacggctgcgatgacagt
taccacacgttctgtctgataccaccacttcaagatgttcctaagggagactggaggtgc
cccaaatgtcttgctcaggagtgcagcaaacctcaggaagcatttggttttgagcaagca
gcacgtgattacacgctccgagcttttggggagatggcagatgccttcaagtctgattat
ttcagcatgcctgtgcacatggttcctactgaacttgtggagaaagagttttggcggctg
gttagtaccattgaagaagatgtcactgttgaatatggagcggatattgcttcaaaggaa
tttggcagtggctttcctgttagtgatgggaaatttaaagtgaaacctgaagaagaggat
tatatcggtagcggctggaatttgaacaatatgcctgtgatggacccatccgtattggct
cacatcactgcagacatctgtgggatgaagctgccctggctgtatgtgggcatgtgcttt
tcatcattctgctggcacattgaggatcactggagttactctatcaactatctgcattgg
ggagagccaaagacctggtatggtgccccaggatatgccgcagaacagctggaagaagtc
atgaagaagctggctccagagttatttattgcacagccagatctcctccatcagcttgtc
actattatgaaccccaatacactaatggctcatggtgtgccgatttatcgaaccaaccag
tgtgccggagaatttgtgatcactttcccgagagcctatcacagtggctttaaccagggg
ttcaactttgctgaggctgtaaacttttgcactgttgactggctaccattgggtcgccaa
tgtgtggagcattaccgggagctaaatcgttactgtgtgttctctcacgatgagatgatc
tgtaagatggctttaaaagctgctacactggatgtagtgttggcctccactgttcagaag
gacatggctgttatgattgaaaatgagaaagttctgagggaagctgtacgccagctgggg
gtaattgaatctgagaggatggactttgaagagctggccgatgatgaacgccagtgtgta
aaatgtaagaccacttgtttcatctcttgtgtttcatgcccatgttcgcctggagaactg
gtatgcctatatcacgtgaaggagctatgtgcctgtccagtttacaaatacaagctgcga
tatcagtatactcttgatgacctctacccaatgatgaattcattaaagttgcgtgctgag
tcttacaatcgatgggcgtcagtggtgaaagaagctttggaagtgaaatgtggcaataaa
aaaagtctttccgatttcaaggacttgatagaagaatcacaagtaaaacgttttcctgac
aacgaccttttacgccatctacgtttagttgcccaggacgcagacaaatgtgcatcagtg
gctcaactgcttctaaaaggcaaaaggcaaaccaggtatcgatcgggaggtggtaaatct
caaaaccttttaactgtgaatgagctccagagttttgtgaaacagctttatgccctccca
tgtgtcatcagtgagacaccgttgcttaaggagcatctgaccagagtagaagatttccta
caacagagccaaaggctcctctctgaggagatacccaatacctctgagatactggacctt
ctggatgtcagctttgagtttgatatagaacttacgcagattggggaattgcgcaagagg
ctagagcaagttcgctggttacaggatgtaaatcgggcatgcagcaatccgagcagcctg
accttggatgatatgagacgactcatagacttaggagttggtttagccccacatgtcaca
gttgaaaaagcaatggcgagactacaagaactgctgacggtgtctgaacactgggatgat
aaggcccgaagcctcatcaaggccaggccgcacagttcaatcagcgttcttgctgcagca
ttggaggaagtagagaatgttcctgcatatcttccaaacggtgtggctttgaaagatgct
atacagaaagccaaagaatggcagcaggaagtggataccatacaggccagcgggcgtgtg
ccagtgcttgacaacctgatggaactagtgtcaagaggtcgcagtatcccagtgcatttg
gattttttaccacgattggagtccctagtgtcagaggtccaaacttggaaagagagtgca
tccagtacgtttctgactccggacttgaacttctctcttctggaggtgctttgccccaga
tgtgatgttggcgttgtggcacttaaaagaaaacagaagaaactgaaggaaccaccaggt
ctgagtggcaagaaagtatttgtaaagttggaaagcctggctgatttggaaagagcttta
tctgaaagcaaggacactgcagcagctatggccaccttgggcgaagctcgtctgagggag
atggaagccttgcatgctctaagaaccttaaatgaacagaaattgctgtccagtgaggag
gacttggattggagagtgtgtgtttgtcaagaagctccagcttctcctatgatacaatgt
gaactctgcaggggttcattccacacacgttgtgttaccttgcccagtgtgcagcaggga
cagagggtgtggctgtgtcctcagtgtcatagatcacagaaaccacctttagaaaagatt
ctgcctttgcttgcttctttgcagcgcatccgcgtgcggctccctgagggggatgctctg
cgcttcatgatagagcgcactgtgaactggcagcatagagcacagcacatactatcttca
ggaaacattgcactgttactggacagttgtggcacaggccagttgtacaacagatggcaa
gctacagcaggacagcttccagagacgaacaaggtatcgcagacggtgggtgcaatgtct
ttctctttggctcatgagtgggataaccgaactgcatacattcagtctcctttttcacca
ggacgtaactgcattcctctccatggtcttagtgcagaactagaagaagtgctgatggaa
gcccaatcactgcaggtctctctaccagaaatacaggagctgtaccatattttattcatg
caacagcagcaacaattcgctgagcagtcaaagcacatttcttccttatggatccccagt
gagaagaacccagttgagtgcattgaggaacgtggtccacaacaaggagagattgagtgt
gcaattaaagacgttctcactagtgtggaaagaaaactaaaacgacaacatgaacgccga
cacttctttggcaaaaagcatagagtgaagaggatggttgcgcccaaaaaaataaaatta
aatcagtcaaaggatttgaacatgaacagactggatactcctgaggaacagctccatgag
gtgccagtgctcagtgagtcacactccagttcaggggacttgtcatattcagagggtgat
gattctgatgatgaggatgcggtttgccctgctccagactgccagcagcctgaaggagaa
gaggtagattgggtccagtgtgacggcagttgcaaccaatggtttcatcaggtctgtgtt
ggcgttacctcagaaatggcagaaaaggaagattatgtctgtatccggtgtacagccaac
agtgttatgaatcgaaaatag

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