Pleurodeles waltl (Iberian ribbed newt): 138300227
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Entry
138300227 CDS
T10800
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138300227 (TRUB1)
Enzymes [BR:
pwl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
138300227 (TRUB1)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138300227 (TRUB1)
Prokaryotic type
138300227 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
138300227
NCBI-ProteinID:
XP_069095377
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All DBs
Position
6:complement(747421184..747609412)
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AA seq
293 aa
AA seq
DB search
MAAASSMGDAHCNKAARLLSLSGLFPIFKPKGPTSAAYLNQLKAKLLKEAGIEHQGMKRK
QQKLKMGHGGTLDSAASGVLVVGIGKGTKMLTTMLTGSKKYTTVGELGKATDTLDALGKI
TEEKPYDHITKLDMEGVLSKFVGDIMQVPPIYSALKKDGATLSSLAKKGEKVEAKPARPV
TVYNISLKAFQPPLFTLDVECGGGFYIRSLVSDIGKELSSCASVKELTRTKQGQFTEENA
VPEENWTIDGIAEALEQGPPSTIVDPSAKRFKAQDSNKEAEGPALSDLDCDQK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcttccagcatgggggatgctcactgcaataaagcagctcggctgctatct
ttgagtggtctcttcccaatcttcaaacccaaaggaccgacatcagctgcgtatctcaac
caactgaaggcgaagctgttgaaagaagctggtattgaacatcaaggaatgaaaagaaag
cagcagaaactgaagatgggacacggaggcaccttggatagtgctgcatctggagttttg
gtggttggaatcggtaaagggaccaaaatgctaactacaatgctgactgggtccaagaaa
tatacaacagttggagagctgggaaaagccactgacaccttggatgctcttggaaaaatc
acagaagaaaagccttatgatcacatcaccaagttggacatggaaggcgtcctctcaaag
tttgtcggagacatcatgcaggttccaccaatatactctgctttaaagaaagatggagca
acactctcaagtttagcaaagaagggagaaaaggtggaagccaaacctgccaggccggtg
acagtctacaatatatcactgaaagctttccagccaccgttgttcactcttgatgtcgag
tgcggaggaggcttttatatccggagcctggtcagcgacattggtaaagagctgtcgtct
tgcgctagcgtgaaggagttgacacgcacgaagcaaggccagtttactgaggagaatgca
gtccctgaagagaactggaccattgacggtattgcagaggcactggaacaaggcccacca
tctactattgtagacccctccgctaagaggttcaaggctcaggactcaaacaaggaggct
gaggggccagccctgagtgatctggactgtgaccagaagtaa
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