Pleurodeles waltl (Iberian ribbed newt): 138300253
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Entry
138300253 CDS
T10800
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
138300253 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
138300253
NCBI-ProteinID:
XP_069095496
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Position
6:complement(781017598..781418882)
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AA seq
582 aa
AA seq
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MSSNLGKDKDSKEKDPKVPIVKEREKEAKASGGFGKDSKDKEPKTKGKDAKEGKKEPSGA
QPGVAFSVDNTIKRPNPAPANRKKASNAEVIKELNKCREENSMRLDLSKRSIHMLPPSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLQTLALSENSLTSLPESLDSLKKLRMLDLRHNK
LREIPAVVYRLSSLTTLYLRFNRITTVEKDFKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPETIGNLCSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVNLSNLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKIRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLSTLPRGIGHLTNLTHLGLGENLLSHLPEEIGTLENLEELYLNDNPNLHLLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatttaggaaaagacaaagactccaaggaaaaggatcctaaagtcccaata
gttaaggaaagagagaaagaggccaaggcttccggtgggtttggcaaggacagcaaggat
aaggagcccaagaccaaagggaaagatgccaaagaaggaaagaaagaacccagtggtgct
cagccaggggttgctttttcagtggacaacacaataaaacgtccgaatccagcacctgca
aatcgcaaaaaagcgagcaatgcagaggttatcaaagagctcaacaagtgccgggaagag
aattctatgcggttggacttgtccaagaggtcaatacatatgcttccgccgtccattaaa
gagttgacccaattaacagaactgtatctgtacagtaacaagctgcagtctctcccagca
gaggtgggctgtctggtgaatctgcagacactggccctgagtgaaaactcgcttaccagt
ttgccagaatctcttgattcattgaagaaactgcgcatgcttgacctgcggcacaacaaa
ctacgagaaatccctgctgtggtgtacaggctaagttcccttaccactctctatttacgt
ttcaaccgcattactactgttgagaaggacttcaaaaatttatccaagctcacaatgctt
agcatccgggagaacaaaatcaagcaactgcctgctgaaattggtgaattgtgtaatctt
ataacgctggacgtggctcataatcagcttgaacacctaccaaaagaaattggcaattgt
atacagatcaccaaccttgacctacaacacaatgaactcttggacctgccggaaactata
gggaatctctgcagtttaagccggctaggactgaggtacaacaggttatctgcaataccg
aagtccttagcaaagtgcagtgaactggatgaactgaacctggagaacaacaacatatca
acgttaccagagggtcttttatccagtcttgtgaatttgagcaatttaactctggccagg
aactgcttccagtcctatcctgttggtggaccatctcaattctccactatctactctctc
aacatggagcacaatcgtatcaataaaattccttttggaattttctcaagagctaaagtg
ttaagtaagctgaatatgaaggacaatcagctgacctcgctccctttagattttgggact
tggacaagtatggtggaactgaacttagcaactaatcaacttacaaaaattcctgaggat
gtgtctgggcttgtctcgctagaggttcttatcttgtcaaataatcttctgaagaaactt
cctcatgggattggaaacctgcggaaaataagagagctggacttggaggagaacaaactt
gaatctttgcctaatgaaattgcatatcttaaagacctacagaaattggtcttgactaat
aatcaattaagcacccttcctagaggaattggacacctaaccaatctgacacatcttggg
cttggagagaatttgctgtcacatctgcctgaggaaattggtacactggagaacctggag
gaactgtatttgaatgacaaccccaatctacatcttttaccatttgagctggccctctgc
agtaaactgtcaatcatgagtattgagaactgcccgcttagccacctaccaccacagatt
gtcgcaggaggaccgtccttcatcatccagttcttgaaaatgcagggtccttaccgtgcc
atggtgtaa
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