Pleurodeles waltl (Iberian ribbed newt): 138300257
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Entry
138300257 CDS
T10800
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04110
Cell cycle
pwl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138300257 (SMC3)
04114 Oocyte meiosis
138300257 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pwl03036
]
138300257 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pwl00535
]
138300257 (SMC3)
Chromosome and associated proteins [BR:
pwl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
138300257 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
138300257 (SMC3)
Proteoglycans [BR:
pwl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
138300257 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
APG6_N
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
138300257
NCBI-ProteinID:
XP_069095509
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All DBs
Position
6:complement(783529774..784378970)
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AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETSGEKSRQLRDAQQEARDKMEEIERNARELKSKISAMKEEKEQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERTKLLEKIEEKQKELAETEPKFNSVKEKEEN
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQINTINKDL
EETEANKEKNLEQYSKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVMNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVESDDVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNSRFDKAFKHVFGKTLICRSMEVSTQLARAFNMDCITLEGDQVSS
RGALTGGYYDTRKSRLDLQKDVRKVEVELRELEAKLNDNLRKNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTYMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRL
DQVEQELNELRETEGGTILTATTSELEAINKRIKDTLARSNELDNNIDKTESELKDHQKS
LDRVKNMEKDHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPSGKATLVMKKGDVEGSQSQDEEGSTESEKGS
GSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMILELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggtcatcattcagggctttcgaagttacagagatcagacaattgta
gatcctttcagtccaaagcataacgtcatagttggcagaaatggatctggaaagagtaac
tttttttatgctattcaatttgtcctcagtgatgagttcagccatcttcgcccagagcag
agattggccctgctgcatgaaggaactggacctcgtgttatctctgcttttgtggaaatt
atatttgataactcggataacagattacctattgacaaagaagaagtttcattacgtcgc
gttataggagcaaaaaaggatcaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatctacttgaaagtgctggcttttctcgcagtaatccttattatattgtgaaa
caaggaaagatcaaccaaatggccacggctcctgactctcagagactgaaattattaaga
gaagttgcaggaaccagagtgtatgatgagcgtaaagaagaaagtatctccttgatgaaa
gagactgagggtaagagagaaaaaataaatgagttgctgaagtacattgaagaaagactt
catacactggaagatgaaaaagaagaactggcccagtaccagaaatgggataaaatgaga
cgagcacttgagtacaccatttataaccaggagctaaatgagactcgtgcaaaactggac
gagctttcttcaaaacgagaaactagtggagagaaatcaagacaactgagggatgcccag
caggaagccagagataaaatggaggagattgagcggaatgccagggaattaaaatctaaa
atctctgcaatgaaagaagaaaaagagcagctcagttctgagcgacaagaacaaattaaa
cagaggaccaaattagagctcaaggcaaaggatttacaggatgaactagctggcaacagt
gagcaaaggaaacgtctactgaaagagagaacaaaacttcttgaaaaaatcgaagagaag
cagaaagaactggcagaaacagaaccaaaattcaacagtgtgaaagaaaaagaggagaat
ggaattgccagactagcacaagccacacaggaaagaacagatctgtatgcaaagcaaggc
agagggagccaatttacatcaaaagaggaaagagacaaatggattaaaaaggagctcaag
tctctagatcaggctatcaatgacaagaaacgacagattaataccataaacaaggacttg
gaggaaactgaggcaaataaggagaagaatttggagcaatacagtaaactggaccaagat
ctgaacgaagtgaaaacgcgtgttgaggaactggacaaaaaatattatgaagtaaaaaac
aaaaaagatgaactgcagagtgaaagaaattacttgtggagagaggagaatgctgaacag
caggctctggctgccaagcgtgaggatttggaaaagaaacaacaacttcttcgagctgct
actggaaaggctatattaaatggtattgacagcataaacaaagtgttggagcactttcgg
cgaaaaggaataaaccagcatgttatgaatggctaccatggcatagtcatgaataacttt
gaatgtgagccagccttctacacgtgtgtagaagtcactgcaggaaacaggctgttctat
catattgtagaatctgatgatgtcagcaccaagattttaatggagtttaataaaatgaat
ctaccaggagaagtgacatttctaccactgaacaagctggatgttcgagacactgcatat
ccagagaccaatgacgctatccccatgattagtaaactgaggtacaactcaagatttgat
aaagcattcaagcatgtgtttgggaaaacactgatttgccgtagcatggaagtatctaca
caacttgctagagctttcaatatggactgtattactttggaaggtgatcaggtcagcagt
cgtggtgctctcacaggaggttattatgacactagaaagtctcgacttgacctgcagaaa
gatgttaggaaggttgaagtggagcttcgtgagttagaggctaaactcaatgataatcta
cgcaaaaatattgaaaggattaacaatgaaatcgatcagttgatgaaccagatgcagcaa
atcgagacacagcaaagaaagttcaaggcttcccgtgatagtatcttgtcagaaatgaag
atgctcaaggagaaaaggcaacaatctgagaaaacttatatgcccaagcaacgcagctta
caaagtttggaggcaagtttacatgccatggaatctacacgcgagtcattaaaggccgaa
cttgggactgatttgctgtcacagctgagtctggaagatcagaggagagtagatgcactg
aacgatgagatccgccaattgcaacaagaaaacaggcagctcctaaatgaaagaattaaa
ctggaaggcactatcacacgagtagagacgtacctaaatgaaaatcttaggaaacgatta
gatcaagtggaacaggaactgaatgaacttcgagagactgaaggcggaaccattcttact
gccactacatctgaacttgaagcaatcaacaagcggataaaggacaccttggcacgatca
aatgagcttgataacaacattgacaaaactgaatctgagctcaaggaccatcagaaaagc
ttggatcgtgtgaagaatatggagaaagatcacatggatgccattaaccacgataccaaa
gaactggagaagatgactaatcggcagggcatgcttctaaagaagaaagaagagtgcatg
aagaaaatcagagaattgggatcccttccccaggaagcatttgagaaataccagacgctt
acattgaaacagttgtttcgtaagttggagcagtgcaacactgagctgaagaagtacagc
catgtcaataaaaaagccttggaccagtttgtgaatttctccgagcaaaaagagaagctg
ataaaacggcaggaggaattggacaggggttacaaatctatcatggaactgatgaacgtc
ctagaacttcgaaagtatgaagccattcagctgacttttaaacaggtgtctaagaatttc
agtgaagtttttcagaagttggtgcctagtggtaaagccacattagtgatgaaaaaaggt
gacgtggagggtagccagtcccaggacgaagaaggcagcacagaaagtgagaaagggtct
ggatctcaaagcagtgtcccctcagtggaccaattcactggtgttggaataagggtgtcc
tttacaggaaaacaaggtgaaatgagggaaatgcagcagctctcaggaggacagaagtca
ttagtagcacttgccctcattttcgccatccaaaagtgcgatcctgctccattctactta
ttcgatgaaattgaccaggctctagatgcccagcataggaaagctgtctcagatatgatc
cttgaactagcagggcatgcccagtttattacaacaactttccgacctgagctactggaa
tcagctgacaagttctacggtgtgaaattcagaaataaggtgagtcacattgatgtaatt
tcagcagagcaagcaaaagactttgtggaagatgacacaactcacggctga
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