Pleurodeles waltl (Iberian ribbed newt): 138300346
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Entry
138300346 CDS
T10800
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwl03009
]
138300346 (RRP12)
Ribosome biogenesis [BR:
pwl03009
]
Eukaryotic type
90S particles
Other 90S particles
138300346 (RRP12)
Pre-60S particles
Other pre-60S particles
138300346 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
138300346
NCBI-ProteinID:
XP_069095711
LinkDB
All DBs
Position
6:complement(861774085..862456722)
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AA seq
1289 aa
AA seq
DB search
MGKTGKLRSGTAGKLKRWKKGHSSDSNPVVRQHREAARSRFFSRPTENSNLTVDALKLHN
DIQSGPLSTEGKKEGSQHLMEHENNVAITEKSGVTFLSGLTDCTNVTFNKVQRYWESNSA
AHKEICAVLAAVTEVIRSQGGTESETEYFAALMTTLEAVESSESLAAVAYLLNLVLKRVP
GPVLIRKFSDTSKAFMNIMASQASTGCTSSLRWILSCLAILLRKQDPTVWSYPSTLQVYH
GLLSFTVHAKPKVRKAAQIGVCSILKGSEFLFGENAPLHHPASQSTAKFCIQEIENSGGS
KEATTTLHVLTLLKDLLPCFPVSAVKSCCETLLRVMTLSHVLITACAMQAFHGLFSAKPN
PLTLTPELNTQIITALYDYLPSENDLQPLLAWLAVMEKAHIHLSSLQSDMCLGHLPRLFT
TAVNCFLSPHTQVVSASAKALKALLKECVAPCIADIGLFSSTPKSGPAFYICKMFRAVEE
GLTYKFHASWAVVLQVLGVFFEVAGKQGHPVMKKCLQTLADLRNSSHFPYTGELDQAVGA
AVESMGPEVVLQAVSLEIDGNEENCNFPRSWLIPVIRDHVKNTELKFFVSYFLPLAARLK
NRATELTESSRNLEAKIYTTLQWQIWTMLPGFCIGPTDVPVSFKALARTLGMAISDRTDL
RLTVCQALRTLINKGCEAEADRAEVGRFAKNFLPILFNIYTQKPPAGESSTDRLPILDTI
KIYLTITDQQMVGTFLSKASEKLTDPESSEFTRLSIFDLIVAMAPYADEPCMTQTYHIIL
PYLENKDHGIQKKAYRVLEEICGGQREPCKSFVNNNLEDLKKTLLGSLKSASSPAKRPRL
KCLIHVVKQLTVDHEAFITALIPEVIICTKEVAVSARKNAYTLLAEIGKAFLRFNQNSHE
AILRYLTLVYAGLTGSVTMISCTVLALTRILFEFKDIMSVVVIEQLLENVCLLLSSKTRE
VVKAALGFIKVVLFVMDIKLLSKHLQLMMEAIGNIKDDVRRHFRVKLKNVFTKFIRKFGF
DLVKSMLPEEYHKVLVNIRKAEAKSKKLRALKDAASTDVSDEPTSQRKGDSIEDILADSD
SEEDDEKKGKEQKKQTKPKSQAWLKEGEDDEPLNFLDSNAAQRVLATKPKGNQNTKVKHN
FQITSDGRLIIRDDEDEEEEKNKAEVDEEMADLMQEVGIRSKKSQKRRFKEDENDEGIDS
LSQYKAGGSGIHRPLTKKAGFGMEYKSKKGKGDVKQSGRHDPYAYVPLNKAKLNRRKKAK
MQGQFKGFMKAAQKGANAGRKRRRKERSI
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaccgggaagctgcgctctgggactgctggcaagctgaagcgctggaaaaag
ggtcatagcagcgactctaacccggtcgtccgacagcaccgtgaggctgcgcggagccgt
tttttcagccgtcctacagagaacagtaacctgacagtagatgccttgaagctccacaat
gacattcaatcaggacctctgtccacggaagggaaaaaagaagggtcccagcatctcatg
gagcatgaaaacaatgttgcaattactgaaaaatctggagtcacgttcctgagcggtttg
actgactgcaccaatgtcaccttcaacaaagtacagcgatactgggagtctaactctgcg
gcacacaaagagatatgtgcagtgcttgctgctgtaactgaagtaattcgctctcaggga
ggcacagagagtgagactgaatactttgctgcattgatgaccactttagaggctgttgag
tcctctgaatcgttggctgctgttgcatacctgctcaaccttgtcctgaaacgggttcct
ggccctgtgctgataagaaagttttcagatacgtccaaagcctttatgaacattatggcc
tcccaagcaagcactggatgcacgtcttcgctccgctggatcctgtcgtgcctggcgata
ttgttgcggaaacaggacccaactgtatggagttacccctcaactctgcaggtgtaccat
ggattactcagcttcacagttcacgccaaaccaaaggttcgtaaagcagcccaaattggt
gtatgctctatcttaaagggaagtgaatttctgtttggagaaaatgctcctctccaccat
cctgcttcccagtctacagccaagttctgtatccaggaaattgagaactctggaggcagt
aaagaagccaccacaaccctgcatgttctgacgctcctgaaggaccttttgccttgcttt
cccgtcagtgcagtaaagtcctgttgcgagaccttgcttagagtaatgaccctgagccat
gtattaattacagcatgtgccatgcaggcgttccatggtctcttcagcgccaaaccaaac
ccattaactttgactcctgagctgaacacccagatcataacggctctatatgattacctt
cccagtgagaatgaccttcaaccactattggcatggttggcagtcatggagaaagcacat
atccacctgtccagtttgcagagtgacatgtgcctggggcatctgcctcgtctttttact
actgctgtgaactgcttcctttcgccccatacccaggtggtatctgcctccgcaaaggct
ttgaaggccctgttgaaggaatgtgttgcaccttgtattgctgatattggactattctct
tcgactcctaaatctggacctgctttttatatctgcaaaatgttcagagctgttgaggaa
ggcttgacatacaaattccatgcctcgtgggctgttgtactccaggtactgggggtgttt
tttgaggttgctgggaagcaaggccatccagtcatgaagaagtgcctgcagactttagca
gacctgcgaaattcttcacatttcccctacactggtgagctggaccaggctgtgggtgct
gctgtggaaagcatgggccctgaggttgtgttacaggctgtttctttggaaatcgatggc
aatgaggagaactgcaattttcctcgtagctggctaattccagtaattcgggaccatgtt
aagaacacagagctcaaattctttgtttcatattttttgccgctggctgcaaggttgaaa
aatagagccaccgaactgacagagagtagtagaaatttggaagccaaaatctacacaacc
cttcagtggcagatctggacgatgctgcctgggttttgcatcggtcccacagatgtgcct
gtttcttttaaagctttggcccgcaccctgggaatggctatcagtgatcgaactgacctt
cgcttaactgtttgtcaggctctgcggactcttattaataaaggctgtgaagcagaagcg
gaccgggctgaagtgggaaggtttgccaagaactttttacctattttgttcaatatctac
actcagaagcctcctgctggggagagtagtacagatagactacccattttggatactatt
aaaatctatctgactatcactgatcaacagatggttggaacgttcctgtcaaaagccagt
gagaaactaactgatcctgagagttcagagttcaccaggttgtccatatttgatctgata
gtagccatggctccctatgcagatgaaccttgtatgactcagacctatcacatcattctc
ccatacttggagaataaagaccatggaatacagaagaaagcataccgtgtgctggaggaa
atctgtggggggcagagagagccatgcaagtcatttgttaacaataatttagaggatctc
aagaaaacattactagggtctcttaagagtgcatcttcgcctgcaaagcggccaaggttg
aagtgcttgattcatgtggtgaagcaactcacggtagaccatgaagccttcataacagcc
cttattccggaggtgatcatctgcaccaaggaggtagctgtgagtgctcggaagaatgca
tacaccctgctggcagagatcggaaaggcctttctgcgttttaaccaaaattctcacgaa
gccatattgaggtatctgactctggtttatgctggattgactggttctgtcacgatgatc
agctgtactgtcctggctttgacgcgcatactctttgaatttaaagatatcatgagtgtt
gtggtcatcgagcagctgctggagaacgtctgtcttctcctcagttccaagacacgggaa
gtggttaaggcagccctgggattcatcaaagttgtgctgtttgtaatggacatcaagctg
ctatccaagcatctgcagctcatgatggaagcaataggaaacattaaggacgacgtgagg
agacacttccgtgtaaaactgaagaatgtattcaccaaattcattcgcaagtttggcttt
gatcttgtgaagagtatgctgccggaagaataccacaaggtactggttaatatcagaaaa
gcagaggctaagagtaaaaaattgagagccctcaaagatgcagcatcaacagatgtcagc
gatgaacctacatcacaacgtaaaggagacagcattgaggatattttggcagattcggat
tctgaggaagatgatgaaaagaaggggaaggagcagaaaaaacaaacaaaacctaaaagc
caagcttggctgaaggaaggggaagatgatgaacctttgaatttcctagattcaaatgca
gcacaaagagtcctggctacaaagccaaaagggaaccagaacacaaaggtaaagcacaat
ttccagatcacgtcagatgggcgattgataatcagagatgatgaagacgaggaggaagaa
aaaaataaagctgaagtggatgaagaaatggcagacctcatgcaagaagtaggcattcgc
agtaaaaaatctcaaaaaagaagattcaaagaagatgagaatgatgaaggaatcgactcc
ctgtcgcaatacaaagcgggtggttccggtattcacagaccacttaccaaaaaggcagga
tttggcatggaatataaatccaagaaaggaaaaggtgatgtgaagcaaagtgggaggcac
gatccatatgcatatgttcctttgaataaggcaaaacttaaccgaaggaaaaaggccaag
atgcagggccagttcaaggggttcatgaaggctgctcagaagggggcaaatgctggacgg
aagaggagaagaaaggaaagatcgatttga
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integrated database retrieval system
