Pleurodeles waltl (Iberian ribbed newt): 138300517
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Entry
138300517 CDS
T10800
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Cilium and associated proteins [BR:
pwl03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
138300517 (NPHP4)
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Gene cluster
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Other DBs
NCBI-GeneID:
138300517
NCBI-ProteinID:
XP_069096072
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Position
6:complement(1048349657..1049302202)
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AA seq
1434 aa
AA seq
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MGKGHWQEIFAHNHTVPCHSQRGRTSQNASTGYQLIIKSLEGIPLIQRLLEGLLEVQYQL
RISLFDISYRHFFGKTWKSTPRLVRSEPGQIPTVKFNEPVYFHTSLNNINVVAVVEIVAQ
GTKNDGTNQDLSCGFGILRLFSDQLPTAEPETQNKRLKLYHGTPRALLHPALKDSMELNK
YITLIENCQIQYNLREHPPLEAVIHLFPENMLFSGRETIPGVIAAEDERRDALLKPRLQK
TVTLYLDRLFLNLYPSLEKFEEELLLLLDRDRLLKDNYMLPDGGKVTIQERRLHVGVHNG
CCFVQKPQVVVVVPESEVIRGRSASFNKKRGSNPKLSSSPQALVMRSRLRLTEMVNHPSF
AVVFQLEYVISAPRVLDGKAPANVLSRASYMQMIRWAVWSPSLQSVSTEVTLPLQGGATS
NPANVLVYKIPPSTMSSSEVKQVESGSVHFSFSVRSEGNLGTSADSMESLNEEVQKAKKT
QKVSYAKPPSHLPKTPQDTEKGPVLSRSQLSSTSRYPTISHSTTTPLQQQLPSQLLPSPM
AYQLSHAEVPFGSSIAHLEADFSQTNLVSEPFQPEHLRELAFTPVHAPIVAMGTQTGSSA
SILSRASLARLHTAGFPDILDCNNEVAEVVDPADPVKFSPQREEADHLQCNEIILQFLAY
IRIPQEDIPAQWPRSIYFTFQFYRFPPVTSPRLQLMKLDQSDLSSHILLQINKDGSVNTG
LPGYQLKYMVEPAFLKPGEQRWFIRYLALHSLQIDVWDGDSLLLIGSAAVEIKHLLRQGR
TAVQVSHELEVITTEYEQDTMLMSGDVTRHGTVKPIGVSTIVKGRLHLRLGNVGHVCERK
FKRSDSLPPSRSRIVSAHDGTSGFHGGSLYSHNANSGKSFSRAQKLADLDSELGAMLFSR
TKEVSAALQLSNREADTVRRRKLERMMSVRQQESQENVNLRKSLIMARREERLQHSRDLQ
IIEAYRERTKAESISTMLSQAITSIYNVYATLGTAEFFEFALKNPYNIQHTITIEIDNPE
LSVILDTREWKHFKELTNTVTALEEDMFHYQADMQTPQLYLRPKETVHVPFKFQTFAIDQ
IVMAQCPSTMGFEKGKDAESQWKTSAMLSRHIKVTFRIEDGKPMAILRVNVEPQPHVVDQ
TFRFYHPELSFLKKSIRLPPWHMLPGAPVGEPNGMPEIFVRCSDPNIICDSKNMGPGEPQ
DVFLKVSAGPSPQIKKFFVTIYTDPWLAAPIQIWQFYIHSLQRVDISCITGQLTRLSLVL
RGTQVVRKVKAYTSHPLELKVDPESAFILPPNGLQDLHISVRPHKSGSRYIYLNLVDVDH
HQLVSSWLICMSSRQPLILKAFEITLSAGGGKGSNKRITYTNPYPSKKDYSLHTNRPDLL
QFKEDRFQIGGGETYTIGLRFAPSQSTGMEEILIYINDDEDKNEETFCVKVIYT
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggccactggcaggaaatatttgcacacaaccatactgtaccctgccattca
cagagagggagaacttcacaaaatgcttctacaggttaccagctgattattaagagtctt
gaaggcattccattgattcagaggttactagaaggtctgttggaagttcagtatcaactc
agaatttctctttttgacatctcatatcgtcatttcttcggaaaaacctggaaaagtact
ccaaggcttgtccggtccgaacctgggcaaatacctaccgttaagttcaacgagcctgta
tattttcacacgtcattaaataatatcaacgttgttgctgttgtggaaatagtggcccag
ggcacaaaaaatgatggaacaaatcaggatctgtcctgtggatttggaattctgcgcctt
ttcagtgaccagttaccaacagcagagcccgagacacagaacaaaaggctaaaactgtat
catggtacacctcgtgctctcctgcatcctgccctaaaagactccatggaattgaataaa
tatataaccctgattgagaactgtcaaatacagtacaatttaagggaacatccaccactg
gaagctgttatacacctgttccctgagaatatgcttttttctgggagggagactatacct
ggtgtaatagcagcagaagacgaaagacgtgacgccttactgaagccccgactacagaag
acagtgactttgtacttggaccgtttgttcttaaatctatatccgtcattggagaagttt
gaagaagaacttttgttactgctggacagagatcgtttgctgaaggataactacatgctc
cctgatggaggtaaagtcacaattcaagaacggcggctgcacgtaggagtccacaatggt
tgttgttttgtccagaagccccaggttgtcgtcgtcgttcctgagtcggaagtgattaga
ggtcgatctgcaagttttaacaagaaacgtggctctaaccctaaattaagttcttcacca
caagcacttgtaatgagaagtcgattgcgtttaacagaaatggtaaatcatccatcattt
gcagtagtcttccaacttgaatatgtcatttcagctccacgtgtacttgatggaaaggcc
cctgcaaatgtcctatctagagcatcatacatgcaaatgattcgatgggcggtttggagt
ccctctttgcagtctgtctctactgaagttaccttgcctctacaaggtggagcaacaagt
aatcctgccaatgtattagtatacaaaatacctccttcgaccatgagctcctccgaggtg
aagcaggttgagtctggcagcgtccatttcagtttctctgttcgatcagagggcaacctc
ggaacttcagcagattcaatggaaagtctaaacgaggaagtccagaaggcaaagaaaact
caaaaagtatcttatgccaagcctccttcccatttaccaaaaacccctcaagacacagag
aaaggaccagtgttgtctagatctcagttatcttcaacgtcccgctacccaactattagc
cactccaccacaactccgttacagcagcagctacctagtcaacttttgccttcacccatg
gcttatcagctttcacatgcagaagtcccttttggcagcagcatagcacacctggaggct
gactttagccaaactaatttggtctccgagcccttccaacctgaacatctacgggagctg
gcatttactccggtgcatgccccaatagtcgccatgggaacacagacaggaagctctgct
tccatcctgtcccgagcttctctagcccgtcttcacacagcagggtttccagatattttg
gactgcaacaatgaggttgcagaagtggtagatcccgctgatcctgtaaaatttagccct
caaagggaagaagcggatcatctgcagtgcaatgaaattattttgcagttccttgcttac
atcaggattccacaagaagatattcctgctcagtggcctagatctatctatttcaccttt
cagttttatcgttttccacctgtaacaagtccacgattacaactaatgaaactggatcag
tcagatttgtcatctcacatcctactgcagattaacaaagatggctcagttaatactggg
ctgcctggataccaactgaagtatatggtggaacctgcgtttctgaaacctggagaacaa
cgttggtttatacgctatcttgctcttcatagtcttcagattgacgtctgggatggtgat
tccttgcttctgattggatctgctgcagttgaaattaaacatttgctgcggcagggtcgt
acagcagttcaggtgtctcatgagctggaggtcattacgacagaatacgagcaggatacc
atgctcatgagtggtgatgttactagacacggcactgttaaaccgattggagtcagcacg
attgtgaaaggccggcttcatctgcgcttgggaaatgtcggccacgtttgtgagcggaaa
tttaaaagatctgattcgctaccaccatcacgatctcgtatcgtctcagcccatgatggc
acaagtggcttccatggaggtagcttgtattctcataatgccaatagtggaaagagtttt
tctcgagcacaaaagctggcagatttggacagtgagctgggagcaatgctcttcagcaga
acaaaggaggttagtgcagctttgcagctctcaaaccgagaagcagacaccgtacgcagg
cgtaaactggagagaatgatgtctgtgcgacagcaggagtcccaagaaaatgtgaacttg
agaaaatctctcattatggctcgacgtgaggagcgccttcagcactctcgagatttgcag
attattgaagcgtaccgggagcggaccaaagctgagagtatctcaactatgctgagtcag
gctattacctcaatttacaatgtctatgctacactgggcaccgcggaattctttgaattt
gctctgaaaaacccttacaacatccagcacacgatcaccattgagattgataaccctgag
ctcagtgttattcttgatacgagggaatggaaacacttcaaggaactcacaaataccgtc
actgcattggaagaggacatgttccactaccaggcagacatgcagacgcctcaactgtac
ctgcggcctaaagaaactgttcatgtaccgtttaaattccagacttttgcgatagatcaa
attgtcatggctcagtgtccatctactatgggatttgaaaaaggaaaggatgctgaatcg
cagtggaaaacaagtgcaatgctttctagacacattaaggtcaccttccgaatagaagat
ggtaaaccaatggctattcttcgggttaatgtggaacctcagcctcatgtcgtcgatcag
accttccggttctatcacccagagctgtcttttttgaagaagtccatacggcttcctcct
tggcatatgctaccaggagcaccagttggggagccaaatggaatgccagagatctttgtc
cgctgcagcgacccgaatatcatttgtgattcaaagaacatgggtccaggagaaccacaa
gatgtatttttgaaagtatctgcaggtcctagcccacagataaaaaagttctttgttacc
atctatacggacccctggctcgctgctccaattcagatctggcagttttatattcattcc
ttgcagcgtgtcgatatcagctgcatcaccgggcaactcacccgcctttctttggttcta
cgggggacacaggtggtcaggaaagtaaaagcgtacacctcacatccactggaactcaag
gttgatccagaaagtgcttttatcctccctcccaatggattgcaagatcttcacattagt
gttcggccacacaaatcaggcagtagatacatttacctaaatctagtggatgtggatcac
catcaactcgtgtcatcgtggcttatttgtatgtcttctaggcaaccactcattttgaag
gcctttgagatcacgctatctgctggaggaggcaagggctcgaacaagagaatcacctac
acgaacccctacccgtccaagaaggactactctctgcacaccaacaggccggatctgctg
caattcaaggaagatcgattccagattggcggaggggagacgtacacaataggtttgcgg
tttgcaccaagtcagagcaccggaatggaggaaattcttatttacatcaatgatgatgag
gacaaaaacgaagaaacgttctgcgtgaaggtcatctatacatga
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