Pleurodeles waltl (Iberian ribbed newt): 138300696
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Entry
138300696 CDS
T10800
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl02010
ABC transporters
pwl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138300696 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138300696 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138300696 (ABCA1)
Transporters [BR:
pwl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138300696 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
138300696
NCBI-ProteinID:
XP_069096476
LinkDB
All DBs
Position
1_2:412797238..412973579
Genome browser
AA seq
2265 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGVVGNFNKSIVSRMFSDTQRLMLYSQKDS
SVNDVHKLLRTLRKFRDAHTGLKLHDFLVENETFSTYLQNNLSMPSLVVNEIMNADVNLE
RVLLSGYQIRLKNMCNVSKLSEFIMISNQAAVPVLNAIVCALPADKLSEAEQQFHSNIDF
LKPVLKGVAFQPLPVEELKETMETMLESLGKLSKELMTMKSWGEMRQEVQFLTHINSSST
PTEIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFNTGNGTEDDTQVLYDNSTTPYC
NELIKNLESSPFSRMIWTALKPLLIGKVLYTPDTPATRQLMSEVNKTFQVLGVFRDLGGM
WEEMRPKVWKFFESSPEMDLIRTLLKNKDSSGLWDDYANSSDWKVEDVSRFLAKDPEDIV
PADGSTYTWREALNETDRFILTVSRFMECVNLDKLEAVSSEGLLINRSMELLHDRKFWAG
VVFLDVGSDSTELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYFWGGFTY
LQDVLEQAIVRTQTGTEQKTGVYVQQMPYPCYVDDVFLRVMSRSLPLFMTLAWIYSVALI
IKGIVYEKEARLKETMRIMGLDNATLWLSWFISSFIPLLMSAGLLVLILKMGNLLPYSNP
AVVFLFLAVFGVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFPL
KIFASLLSPVAFGFGCEYFAVFEEQGVGVQWDNLLESPLEEDGYNLTTSAVMMLFDTFLY
GVMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKSQEIRHKQSDQKEASEMCMEQEPSHL
TLGVSIQNLVKVYRDGKKLAIDGLTLSFYEGQITSFLGHNGAGKTTTMSILTGLFPPTMG
TAYILGKDIRSEISSIRRHLGVCPQHNVLFDMLTVEEHIWFYARLKGSSEKQVKDEMEQM
VIDVDLKEKKKAKTNELSGGMQRKLSVALAFVGDSKVVILDEPTAGVDPYSRRGIWDLLL
KFRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVD
SSLSSCRDSSSTVSFLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLINKHVANARL
VEDIGHELTYVLPYEAAKDGAFVELFHEIDDRLSDLGISGYGVSDTTLEEIFLKVADDTG
VDAETSDGTLPAKRRRYAFGDRQSCLRPYTDDEIVDPNDSEIDPESRETDFLSGVNGKGS
SQVKGWKLIRQQFVALLWKRFLYARRSRKGFFAQIVLPAIFVLIALMFSLIVPPFGKYPT
LELQPWMYEEQYTFISNDAPNDASTQKLLSALMDKPGFGTPCMKGYSVPGNPCSYSEDEW
TTEPIPDDLLDIFLHGNWTMENPSPSCECSNDKIKKMLPVCPAGAGGLPPPQRRQRTSDI
LQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSQALPPGDEVNKSIN
QVKIIFELAQGGAANRFLDSLASFMKALDTKDNVKVWFNNKGWHAIGSFLNVMNNAILRA
NVREGEDPSTYGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSCVPASFVVFL
IQERVSKAKHMQVISGVKPVIYWLSNFVWDMCNYIVPATLVIIIFICFQQDSYVSSSNLP
ALALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVSTFVLELFTNNKL
NNINEILKSVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAM
AVEGVVFFGITILIQYRFFIKPRPVTSKLPPLIDEDDDVTRERQRIHNDGVRGDVLVIKD
LTKVYGMKRKPAVDRLCVGIPPGECFGLLGVNGAGKTTTFKMLTGDTNVTGGEAFLNGHS
NLSDIQEVHRNMGYCPQFDAINELMTGREHLEFYALLRGIPEKEVCKVADWTVRKLGLLK
YSEKHAGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRS
VVLSSHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNKFGDGYTIIVRISGSNPDLKPVE
EFFAIAFPGSVLKEKHRGMLQYQLRSTHSSLARIFSILSKNKKKFQIEDYSVSQTTLDQV
FVNFAKDQSDDDHLKDMSLHKNQTVVDVALLTSFLKDEKVKESCV
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atggccttctggacccagctggggctgctgctgtggaagaacttcacctaccggcgccgg
cagacgttccagttgctgattgaagtggcctggcctctcttcatcttcttcattttgatc
tccgtacgactttcgtatccaccctacgagcagcatgaatgtcatttcccaaacaaggcc
atgccatctgctggtaccctgccctggatacaagggatcatctgcaatgccaacaaccct
tgttttcgctacccgactccaggggagtcaccaggagtcgttggaaactttaataaatcc
attgtctctcgcatgttctcggatacacagaggcttatgctctacagccagaaggactcc
agcgtaaatgatgtccacaagctattgagaacgctgcgaaagttcagggatgctcatacc
ggtttgaagctgcatgacttcctggttgagaatgagacattttcgacttacctccaaaac
aatttgtctatgccttctctggtagtgaacgagatcatgaacgctgatgttaacctcgaa
cgggttttactgtctggctaccaaattcgtctgaagaatatgtgcaatgtgtccaagctg
tcagaattcatcatgatcagtaaccaggctgcagtccctgtcctcaatgccattgtttgc
gcgctgcctgctgacaagctcagtgaagccgagcaacaatttcactctaacattgacttt
ctgaagccagttctgaaaggtgtggctttccaaccactgccggtcgaggaactgaaggag
accatggagacaatgttggagagtcttgggaaactcagtaaagagctaatgaccatgaag
agctggggagagatgaggcaggaggtgcaattcctaacgcacataaactcttcgagcaca
ccgactgagatatatcaagcagtgtcacgcattgtgtgtggccaccctgaaggtgggggc
ctcaaaatcaaatcccttaactggtatgaggacaacaactataaggctctgttcaacacc
ggcaatggcacagaagacgatacccaagtgctctacgacaattctaccacaccttattgc
aacgagctaataaagaatttggagtccagccccttctcccgcatgatctggacagctctg
aaacctctgctcattggaaaggtgctctatacgcctgacactccggccaccagacaactc
atgtctgaggtgaacaagacattccaggtgctgggtgtttttcgtgaccttggagggatg
tgggaagagatgagacccaaggtgtggaagttctttgagagcagcccagagatggatctg
atccggacgctgctgaagaacaaggacagcagtggcctctgggatgactatgccaactcc
tctgattggaaagttgaggatgtttccaggttcctggcaaaagaccctgaagacatcgtg
cctgctgatggctctacgtacacctggagagaggcattaaatgagaccgaccgttttatc
ttgacagtgtcgcggttcatggagtgtgtcaacctagacaagctggaagcagtgtcctca
gaagggcttctcataaacaggtcgatggaacttctacatgacaggaagttttgggccgga
gttgttttcttagatgtgggctcggatagcactgagctgccccatcacgtgaagtacaag
atccgtatggacattgacaatgtggagaggaccaataaaattaaggatgggtactgggac
cctggaccccgcgctgacccttttgaagacatgcgctatttctggggaggatttacttac
ttgcaggacgtgctggaacaagcgattgttcgcacgcagactggtacggaacagaagaca
ggggtgtatgtgcagcagatgccctacccctgttacgtcgatgacgtatttctgcgagtg
atgagccgctcattgcctctgtttatgacactggcctggatctactcggtggctctgatc
atcaaagggatcgtgtacgagaaggaagcacgactgaaagagacgatgaggattatgggg
ctggacaacgccaccctctggctcagctggttcatcagcagcttcatccccctcctcatg
agcgctgggctcctcgtgctgatcctcaagatgggaaacctgctcccctacagcaaccct
gccgtggtctttctgttcttggctgtgtttggtgtggtcaccatactgcagtgtttccta
atcagcacactgttttcacgggcgaacttggcggcagcctgtggtgggatcatatacttc
acgctttacctcccctacgtgctgtgtgtggcttggcaggactacataggtttcccgctc
aaaatatttgcgagtctgctctcccctgtagcctttggctttggctgcgagtattttgct
gtctttgaggagcagggtgttggtgtgcagtgggacaaccttctagagagtcccttggaa
gaggatggctacaacctcaccacctctgccgtcatgatgctgttcgacaccttcctgtat
ggtgttatgacctggtacatcgaagcagtcttcccaggccagtatggaattccccgccca
tggtacttccctttcacaaagtcgtactggtgtggtgagaaatcccaggagattagacac
aaacagtcagaccagaaagaagcttctgagatgtgcatggagcaggagcccagccacctc
acgttgggggtatccattcagaatctggtgaaggtgtaccgcgacggcaagaaattagca
atcgatggactcactcttagcttctacgaaggccagatcacctcattcttgggacacaat
ggtgctggcaagaccactactatgtccatcttaacaggcttgtttcccccaaccatgggc
actgcgtacatcctgggtaaagatatacgctctgagatcagctccatacgccggcatctg
ggggtctgtccccagcataacgtcctttttgacatgctgacggtcgaggagcacatctgg
ttctatgcccgcctcaagggttcatctgaaaagcaggtgaaggacgagatggagcagatg
gtgattgatgttgacttgaaggaaaaaaagaaggctaaaaccaatgaactctcaggtggc
atgcagagaaagctctctgtggctttggccttcgtgggcgactcaaaggttgtcatttta
gatgagccgactgcaggcgtcgatccttactctcgcagagggatatgggacctgctgttg
aaatttcggcaaggtcgcaccattattctctcgacccatcacatggatgaagcggatatt
ctaggggatcgcattgctatcatctcgcatggcaagctgtgctgcgtgggttcttcgctc
ttcttaaagaaccagctgggcacaggctattatctcacccttgtgaagaaggacgtggac
tcgtcgctgagctcctgcagggacagcagcagcactgtatccttcctgaagaaggaggat
agtgtctcccagagcagctctgacgctggcctaggcagtgaccacgagagtgacacttta
accatagatgtttctgcaatttccaacctaatcaacaagcatgtggctaatgcgcggctg
gtggaggacattggtcacgagctcacctacgtgctgccgtacgaggcagccaaagacggc
gcgtttgtggagctgttccatgagatcgacgaccgtctctcagacttgggcatctcgggc
tatggcgtttctgatacaacactggaagagatatttcttaaagtagctgatgacactgga
gtggacgctgagacctctgatggcaccttgcctgctaaaaggagaagatatgcctttgga
gaccggcagagctgccttcgaccatataccgatgacgagattgttgaccccaatgattct
gaaatagatccagaatccagggaaacagatttcctcagtggtgtcaatggcaaaggctca
agccaggtgaagggttggaaactcattcgtcagcagtttgtcgcactgctttggaagcgg
ttcctgtatgcacgtcgaagccgcaagggattttttgctcagattgtgttgcctgctata
ttcgtgctcattgctctaatgttcagtttgatcgtacctcccttcggtaaatatcccacc
ctggaacttcagccttggatgtatgaagagcagtacacctttattagcaatgatgcccca
aatgatgccagtacgcaaaagctcctgagcgccctgatggataaacctggctttggcaca
ccctgcatgaaaggctactctgttcctggaaatccgtgttcatatagtgaagacgagtgg
acaacagagcctatccctgatgacctactggatatcttcctgcatggaaactggaccatg
gagaatccttcgccctcctgcgagtgcagtaacgataagatcaagaagatgctcccagtc
tgtcctgcaggggctggcgggctgcctcctccccagaggaggcagcgtacctcagacatt
cttcagaacctgacaggaagaaacatatcggactatcttgtgaagacctatgcgcagatc
atcgggaagagtttgaaaaataaaatctgggtgaacgaatttaggtacggtggattctct
ttaggtgccagcagctcgcaggcactgccgcctggtgatgaagtcaacaagtctattaac
caagtgaaaataattttcgagcttgctcagggaggggcagcaaatcggtttcttgacagc
ctagcatccttcatgaaagccctggacactaaagacaatgttaaggtgtggttcaataac
aagggctggcatgctatcggctcattcctaaatgtgatgaacaacgccattctgcgagcc
aatgtccgcgagggagaggatcccagcacatatggaatcacagccttcaaccaccctctg
aacctcaccaaagagcagctctcccaagtggcactgatgaccacttccgtggacgtgctt
gtgtctatatgcgtgatcttcgccatgtcctgtgtcccagccagctttgtggtcttcttg
atccaggagcgtgtcagcaaggcgaagcacatgcaggtcatcagtggggtgaagcctgtg
atctactggctgtccaactttgtgtgggacatgtgcaactacatagttcctgccacgttg
gtcatcatcattttcatctgcttccagcaagattcatatgtgtcctcatctaatcttccg
gctctggctctgcttctcctgctttacggatggtctataacgcctctcatgtacccagca
tcctttgtgtttaagatccccagcactgcctacgtggttctgacgagtgtcaatcttttc
attgggatcaatggcagcgtgtccactttcgtcctcgaactgtttacgaacaataaactg
aacaacattaatgaaattctgaagtcggtgctccttatcttcccccacttctgcctggga
aggggactgattgatatggtgaaaaatcaagcaatggcagatgctttggagcgcttcggt
gaaaaccgatttgtctccccattgtcctgggatttggttggaaggaacctttttgcgatg
gccgtggagggtgtggttttctttggcatcacaattttgatccagtatagattcttcata
aaaccaagacctgttacatcaaagctgccacctttaattgatgaggatgatgatgtgacc
agagaacggcagcggatccacaatgatggcgtccgtggtgatgtgctggtaataaaagac
ttgacgaaggtttacgggatgaaacggaagccagcagtcgaccgcctctgtgttgggatc
ccaccaggagagtgctttgggcttcttggtgtcaatggtgctggcaagacgactactttt
aaaatgctgactggcgatacaaatgtaaccggaggagaagctttccttaatggacacagt
aatttatcggatatccaggaagttcatcggaacatgggatactgtcctcagtttgatgcc
ataaacgagctaatgactggccgggagcatttagagttctatgccctcctaagagggatc
cctgagaaggaagtgtgcaaggtggccgattggacagttcgcaagctgggccttctgaag
tattcagaaaagcacgctggcaattatagcggcgggaacaagcgtaaattgtcaaccgca
atagcccttattgggggaccacctgtggtatttctggatgagcctactaccggaatggac
cctaaagcccgtcgctttctgtggaactgtgccttgagcatcattaaagagggccgatca
gtggtgctctcatctcacagcatggaagagtgtgaagcactatgcacaagaatggcaatc
atggtcaatgggaaattccgctgccttggcagcgtccagcacctcaaaaacaagttcgga
gatggttacacgatcatagtccgaatatccgggtcaaatcctgacctgaagcctgtagag
gaattctttgcaattgcctttccaggcagcgtactaaaggagaaacaccggggcatgctg
cagtaccagcttcgctccacgcactcttctctggctaggatattcagtatcctctccaag
aacaagaagaaattccaaatcgaagactactccgtctcgcagactacacttgaccaagta
tttgtaaattttgccaaggaccaaagtgatgatgaccatctcaaggacatgtcattgcac
aaaaaccagactgttgtagacgttgcactcctcacatcctttttaaaggatgagaaagtg
aaagaaagttgtgtgtga
DBGET
integrated database retrieval system
