Pleurodeles waltl (Iberian ribbed newt): 138300743
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Entry
138300743 CDS
T10800
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138300743 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
138300743 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
pwl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
138300743 (PDLIM1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
NMD_SH3
Motif
Other DBs
NCBI-GeneID:
138300743
NCBI-ProteinID:
XP_069096592
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All DBs
Position
6:1197067958..1197393422
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AA seq
338 aa
AA seq
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MSGMIRIVIEGPGPWGFRLVGGKDFDQPLTISRVTPGSKAALANVCIGDEVVAIEGEHTE
HMTHLEAQNKIKGCIDQIALTVNRAESKIWNPIMSEDGKTHPYKMNLSSQPQDLKQIGSA
HNRSAMPFTAATASSSSPKVITAQYNNPAGLYSSENIQTFNSAMESKTAAIAQEPSQVTE
HEAPSSTRVIDKESEVYKMLQENQETEEPPRQSASFRVLQEILESEEKDEETTCEKGDPD
KPSGFRSVRPPTTKVASSIGNTQKLPVCDKCGTGIVGIFVKIRDKQRHPECYVCSDCDVS
LKQKGHFFVEDNIYCEKHARERMTPPEGYDVVTVFPAK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcatgatccgtattgttatcgagggccccggaccctggggcttcaggctcgtc
ggtgggaaggactttgaccagcctctcaccatctccagggtgactcctggaagtaaagca
gcgttagctaatgtttgtatcggagatgaggttgtcgccattgaaggagaacatacagaa
catatgacccatttagaagcacagaacaaaatcaaaggctgcatagatcagatagccctc
actgttaacagggctgagtcaaagatttggaatccaattatgtccgaagatggaaaaaca
catccgtacaagatgaacctatcatctcagccacaggatttaaaacaaataggaagtgca
cataaccgaagcgctatgccgttcactgctgccactgcttccagctcatcccccaaagtg
ataactgcacagtacaacaatccggcaggactttattcctccgagaacatccagaccttc
aacagtgccatggagtccaagacggcagccattgcgcaggagccaagccaagtcaccgaa
cacgaggcgccttccagtactcgagtgatcgacaaggagtccgaggtgtacaagatgctg
caggagaaccaggagacagaagagccgccccgccaatctgcttctttcagggtcttacag
gaaatcttggaatccgaagaaaaagacgaagagactacctgcgaaaaaggagaccccgat
aaaccgtcagggtttagaagtgttcggcctccaactacaaaagttgcgtcttccattgga
aatacgcagaagctgcctgtttgtgataaatgtggaactggtattgtgggtatctttgtt
aagataagggacaagcaacgccatccagagtgctacgtatgcagtgactgcgatgtcagc
ctcaagcagaaaggacacttctttgtggaagacaacatttattgcgagaagcatgccagg
gaacgtatgactccaccagaaggctatgatgtggtcactgtgtttccagcaaaataa
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