Pleurodeles waltl (Iberian ribbed newt): 138300845
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Entry
138300845 CDS
T10800
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pwl04515
]
138300845 (CDHR1)
Cell adhesion molecules [BR:
pwl04515
]
Cadherins
Cadherin related
138300845 (CDHR1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
138300845
NCBI-ProteinID:
XP_069096758
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Position
6:1363121979..1363530662
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AA seq
865 aa
AA seq
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MYHVHQFLGSFLLSVVHVCFGQTNYAPYFFDNGPGIMNGNMALLSLAEDTAIGAHVYTLN
GTDPERNPVTYGIAFKPGSKKYFAVHPVLGNITLVEELDREREDEIEVTVSISDGINKVA
EKVRVLVTDANDESPEFINTPYIISVPENTPSGSSIFKIQAVDRDTGSGGSITYFLQNTR
TSKFTIDRHSGVLRIRAGVTLDYEKTRTHFITVLAKDGGGKLRGKYQVLSATTTVTVNVE
DVQDTPPVFVGTPYFGYVYEDTMAGADILTVIAYDGDRGNPNTIHYSLLNGSDGSFAINN
VSGAISVTKNPNQLQKEIYELKIQVEELSPTGDVVAHAFTVVTIRVVDLNNHPPTFYGEN
GLQNRFELTMYEHPPEGEILRGLKITVNDSDQGANAKFNLRLVGPAGILRVVPQTVLNEA
QVTIIVENSGAIDYEKFQLLTFKLLAVEVNTPEKFSSTADIMIYLLDTNDNVPKFSSEYY
IARIPENSPGGSNVVAVTATDADSGLWGEVKYSIYGAGADLFLIHPSTGIIYTQPWATLD
AEISCKYNFYVKAEDAEGKHSLAEVFVTVLDVNDHYPEFIENIQEKTLIIGSPVRIEATD
QDAEEPNNIVDYAIMQADPDNVFDIDPSTGEIKLKSYIKSMDIIQNITSKKDCKWSVVVQ
AKDRGSPSFSTTAVVKIDVTEETLLHKGPMAAFLMQSKDNPMKALGVLAGVMGIMVIITI
FISTAMFWRNKKSNKVMPVRRIIKRRRADHVPKSARKEWLKINRSGGSADKFDIQETDST
PLNENSNNNIYMPTLPPSAPCLPPPPVPLIRNRTEWSIPTVSGSLTPKLIDQEIKNKVPS
ASAALVSELKLKFEKRNANYTKPYY
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatgtacaccagttcttggggtcgttccttctttctgtggttcatgtctgcttc
ggtcagaccaattatgctccgtacttctttgataatgggcctggcatcatgaacgggaac
atggcgctgctgagcctggctgaggacacagccattggtgcgcatgtgtacacgctgaac
ggaactgacccggaaagaaatccggtgacgtatggaatagcgtttaaaccaggctccaag
aaatactttgcagttcaccccgtccttggaaatatcactctggttgaagaactggataga
gagagagaagatgagatagaggtgacagtcagcatttcagacggaataaataaagttgct
gaaaaagtgagagtccttgtaacggatgctaatgacgagagtccggagtttatcaacaca
ccttacatcatcagtgtcccggagaataccccatctggaagcagcattttcaaaatccaa
gcagtggacagagacacgggttccgggggaagcatcacctatttcctgcagaacacacga
accagtaaattcaccattgacaggcacagtggtgtgcttcgcatcagagctggggtcacc
ctggactatgagaaaacacgaacgcattttatcacagtgctggcaaaggatggtggcggg
aagctgagggggaagtaccaggtgttatcagccaccaccacggtcacagtgaatgttgaa
gatgttcaggacacgccgcctgtttttgtaggcactccttactttggctacgtctatgaa
gataccatggcgggggctgatatcctcacagttatagcttatgatggagacagaggaaat
ccaaacaccattcactacagtctattaaatggaagcgatggatcttttgcaatcaacaat
gttagtggagctatttcagtcacgaaaaatccaaaccagctccagaaagagatttatgaa
ctgaaaattcaggtagaggaactgtcccccacaggtgatgtggtggcccatgctttcacg
gttgtcaccatacgggttgtggacctcaacaaccacccgcctacattctacggggagaac
gggctccagaaccggtttgagctgacaatgtacgagcaccctccagagggagagatcctt
cggggcttgaagattactgtcaacgattctgatcagggagccaatgcaaaattcaacctg
cggcttgttggtccagccgggatcctgcgcgttgttccacaaacggtcttgaatgaggcc
caggtcaccatcatcgtggaaaattctggcgccattgactatgaaaagttccagttgctg
acttttaagctccttgccgtggaagttaacactcctgagaagttcagttccacagccgac
attatgatttaccttttggacaccaatgataatgtcccaaagttctcatctgaatactat
atagccagaattccagaaaattccccaggaggctccaatgttgtggcagtaacagcaaca
gatgccgattctggcctctggggagaggtgaaatattcaatttatggagcaggagcagat
ctattcctcattcacccatcaactggaattatctacacacaaccttgggctacgctagat
gcagaaatcagttgtaaatacaacttttatgtaaaggccgaagatgcagagggaaagcac
agtttggccgaagtgtttgtaacggttctagatgtcaatgaccactacccagagttcatt
gagaacatccaggagaagaccctcatcattggttcacctgtcaggatagaggccactgat
caggatgcagaagagccgaacaatattgttgactacgccatcatgcaggcagatccagac
aatgtgtttgatattgatccaagcacaggagaaatcaaactcaaatcctacatcaagtct
atggacatcatccagaacatcacaagcaaaaaggactgcaagtggtccgtggttgtgcag
gcaaaagatcgcggctcaccttccttcagcaccacagctgtagtaaaaattgacgttaca
gaggagactctccttcacaaagggccaatggctgcctttttgatgcaaagtaaagataac
cctatgaaagccttaggagtcctagcaggtgtcatgggcattatggtgataattacaatc
ttcatctccactgccatgttctggcgcaataaaaaatccaacaaggtaatgcctgtacgg
cggatcataaagcggcggcgggcagaccacgttcctaaaagtgccagaaaagaatggctg
aagatcaaccgttctggtggctctgccgacaagtttgacatccaagagacagactccact
cctctgaacgaaaacagcaacaacaacatctatatgcccaccctacctccaagtgctccc
tgcctgccccctcccccagttccgttgatcaggaatcgcacagagtggagtatacctact
gtgtcaggctccttgacacccaagctcattgatcaggagataaagaacaaagtgcccagt
gccagtgctgcactggtgtctgaacttaaattgaaatttgaaaaaaggaatgctaattat
accaaaccatattactag
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