Pleurodeles waltl (Iberian ribbed newt): 138300871
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Entry
138300871 CDS
T10800
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pwl03037
]
138300871 (CROCC)
Cilium and associated proteins [BR:
pwl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138300871 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
ACBP4_C
Motif
Other DBs
NCBI-GeneID:
138300871
NCBI-ProteinID:
XP_069096814
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All DBs
Position
6:complement(1389436659..1389748861)
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AA seq
2108 aa
AA seq
DB search
MSAPEADVRLEAVIQKLESSILNSSDDKSFTLRGNSEASPATSLPARIREIVTKNLAEQK
TPEPPDEMSSLLSVQEENRILQQELSRVEDLLAQSRAERDELAIKYNAISERLEDALRLK
GLEAVTNADLEQPIRWSCQGLGTVHVAEAALRRRNEMLEQALHLETGERERETLENKGLA
QQNIELRRRLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVIQYKKKCGEVEQQLLERS
SELEHEKLSSHLDLSDSRLRQEEEHSNDLENALIRLEEEQQRSTSLAQVNAMLREQLDQA
NSANQALSEDIRKLTVDWKNARDELEQRESDWRREEESFNTYFSNEHSRLLTLWRQVVGV
RRTFSEMKSMTDRDLSEMRNELSKACRTLHASCIHVSSSQRASEGTAALVVERQALQLAQ
LDEQLKDKVREMIQLQMKSDTEKAELSARIAETTVTIELLKAQDAEKERALETLNQKLEE
LEASRVQQQAAMEAEEIEALRSEADLLQQTLRDLAQAVLSDADSGIQLTSSERTDTEDGE
SPGLSLRALSCSMRTPSPLRRRSPHRSRSPRRSLSPAFTDSTVAAVQSALQKRQLQVQDI
RGRYEASQVLLSSLKKQLSENDTERRALEQRIVQLKKEVDSSSLAKDDAIREANRFRSSV
DILYSEKSTLERTLQALQPQMETLQQEYEKLQLANSDLQRQRENLADEKDDISKDKERAQ
KEIERGHKLLEQLEVKHSSLKKELTLVKEALSKATLEKEVSEHEKADLAEALSKAETGRA
ELELTLNKLKTEEASLRDSLSKMSGMNESLAQDKTELNRVIIQLEEERASLLGQKQEVEQ
EKACIRDELVRLEQEKLDLDTERHGLDHSLQAVEQSRETLQQELTSLQRERAQLKEQLGQ
LSRQRNNLNEDLIQARRDVERHSEAMLRGSKEREGLMKDKASLVVQLTASERENRALSEE
IAGLRSDKEALETALFENQQQLQQLEIKKQQVEAESQSLLLAKEALQGEILSVRKEMELE
RTKAERDKELLGQKLMYMEQEAQASLRNEQVAHEEDVDRIQQEKETLRLELEAEREELLH
RLTQEREELVARCESEKEEMSEEISALQQERDESLLMAENEKQQALSLKESEKNILMEKL
NNTQQSLSNLAMETERYKRESSSRQEQDRGTINALTSELKDFRAQFEEAIRTHEREAKGL
QEQSRELLKQRESALREVEELKTQLRVLEDARDSIRRELIEAHRRVREGQEEQEIQRKES
LDLRRALNDEAKEKEALQKSNEELRAGVKRAESERISLKRANEEKEQKLSILEEARLVVE
KEAADLRSSLREVEKSRLEARRELQELRRQVKMLDTENTKKSKEVAELQARMSIDEQRDE
ENRRETFSLKQKIMETEASRESSRKEVSSLHRKMAELENEFRVREKDLLGSLEEARGNEK
KLQDNARNLEIKLETAHAEASELGLRLSAAEGRIQGLEAELARVEGMKRDVEFKLGSLHS
ALRRTLGISRAGRNPSPAIRGRSSSPKRPFSPTKGFDNTFTTTTDGRGSPIPQTGTPDRG
TRILSPDRAHSPSRGEQLVADIDPEVVRAALRDFLQELRDTQRERDEVRTQASTLTRQLV
EMESDRDSATTRLQQLQKVLSECEEGKRSSDGKLSGVQTTLMLQEETLRRNERERKAALE
KVTNLERSLQAADSERRTIQEKIVKMKSNETKLEGDKRRLKEILDASESRCTRLELARRA
LEGELQRTRLVLNDRETEVQALQDRIETLQKQVTEGEMKADARQVSVDRLTAALAKSEES
EGSLKEKVQSLTALVSEGQASTTTCQEKSLQLQKMLTSSEHERRVLQERLDAARQAMTEA
KKQNGALQDRIQELKNEQAELELQKADLEGQVRQQQELLRQHEETEGASLRNIKKIQEER
ALLQERLSGLQRAVVQLESEKRETERASMRLEKDKTALRKTLDKVEREKLKTEEDTMRLS
AEKGRLDRSLTSVEQDLVDAQRQVQQLEADIDRVRKKITYGLAQIADMEQTHSQSLMESV
TRHRQELQQEIERLRSSQLQAERTLDARERAHRQRVKGLEEQISMLKDQLQQELRRCQPH
YSSILSGN
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccccggaggcagatgtgcggctggaggcggtcattcaaaagttggagagcagc
atcttgaattcttctgatgataagagctttacgttacgtgggaactctgaggcttccccg
gcgacgagcctgcctgccaggatacgggaaattgtaaccaagaaccttgccgagcagaag
accccagaaccaccagacgagatgtcatctctattatccgtgcaggaggagaaccgtatc
ttacagcaggaactgtctcgtgtggaggacctgttggcacagagccgggcagaacgagat
gagctggccatcaagtacaatgctatcagtgagaggctggaggacgccttacgtctgaag
ggtctggaggctgtcaccaatgcagatctggaacaacccattcgctggagctgccaaggt
ctgggcactgtgcacgtggcagaggcggcgttaaggcgcaggaatgagatgctggagcag
gcgcttcacctggagactggcgagcgagagagggaaactctggagaacaagggcctggcc
cagcagaacattgaactgcggcgccgcctggaggaggagcaggctgcttacaagcgcaag
ctgcaggcataccaggaggggcagcagcgacaggcacagctcgtccagaagcttcaggca
aaggtgatccagtacaagaagaaatgtggtgaggtggaacagcagctgcttgagcgatcc
tctgaactggaacacgaaaaactaagtagccatctagatctcagcgactcccgtctacgc
caggaagaagagcacagcaacgacctggagaatgcgttgatccggttagaggaggagcag
cagaggagtaccagccttgcccaggtgaatgccatgctgagggaacagttagatcaggcc
aacagtgctaaccaggctctaagtgaggatatccgaaaactgacagtggattggaaaaat
gcacgtgatgagctggagcagcgtgagtctgactggaggcgggaagaagagtccttcaat
acctacttcagtaatgagcacagccgcctactgaccctctggagacaggtggtgggtgtc
cgccgcaccttcagcgaaatgaagagcatgactgacagggacttgtccgagatgcgtaat
gagctgtctaaggcatgtcgcacgttgcatgcgtcctgtatacatgtgagcagcagtcag
cgtgcctctgagggcactgcagcactggtggtggaacgtcaggcactgcagctggcacag
ctagatgaacagctgaaggacaaagtgcgagagatgatccaactccagatgaagagtgac
acagagaaagcagaactcagtgccaggattgctgagacaacagtgacaattgaactcctt
aaagctcaggacgctgagaaggagcgagccttggagacactaaaccagaaactggaagag
ctggaggcaagtcgagttcagcagcaggccgcaatggaggcagaagaaattgaggccctg
agatcagaggctgacttgctgcagcagacactgcgagatcttgcacaagctgttcttagt
gatgcggatagtggaatccagctgacctccagtgaacgaacagacacagaagatggcgaa
agccctggtctcagcctgcgggcactgtcctgtagcatgcgcacaccctctccgctcagg
agacgctcccctcaccgcagccgttctcctcggcgcagtctttctccagccttcaccgac
tcaactgtggctgccgttcagtcagcactgcagaagaggcagctgcaagtgcaggatatt
cgagggcgatatgaagccagccaggttctgttgagctctctaaagaagcagctgagtgag
aatgatactgaacgacgggccctggagcaaaggatcgtgcaactgaagaaagaggtggac
agctcctcgcttgccaaggacgatgccatcagggaagcaaacaggttccgttcctctgtg
gacatcctatacagtgagaagagcaccctggagcgaacactacaggccctgcagccacag
atggagaccctccagcaggagtacgaaaagctgcagctggccaacagtgacctgcagcgc
caacgagagaacctagcggacgagaaggatgatatcagcaaagacaaagaacgggcccag
aaagagatcgagcgaggccacaagttgctggagcagctggaagtgaagcactcaagccta
aagaaggagctgactttggtaaaggaagctctgagcaaggccaccctggagaaggaggtt
tctgagcatgagaaggctgaccttgcagaggctctgtccaaggcagagactggtcgcgca
gagttagagctgactctgaacaagctgaagactgaggaagcgtcactccgtgactcgctg
tccaagatgagtggcatgaatgagagcctggcccaggacaaaacagaactgaatcgtgtc
ataatacagctggaagaggagcgggcttccctgctggggcagaagcaggaagtggagcag
gagaaggcgtgcatccgtgatgagctggtccgcttggagcaggagaaactggacctggac
acagagcgtcatggactggatcactcactacaggcagtggagcagagtcgtgagacgctg
cagcaagagctcacttccctgcaaagagaaagggcgcagctgaaggaacagctggggcag
ctgtctcggcagaggaacaacctaaatgaggacttgatccaggcacggcgtgatgtggag
cgccacagtgaggcaatgttacgtggatccaaagaaagagagggattgatgaaggacaag
gcaagccttgtggtgcagctgacggcgtctgagcgtgaaaacagagcactgtcagaggag
atcgccggactcaggtctgacaaagaggccctcgagacagcactgtttgagaaccagcag
cagctccagcaactggagatcaaaaaacagcaagtggaggcagagagtcagagcttgttg
ctggcaaaggaggccctgcaaggtgaaatcctcagtgtgcggaaagagatggagctggaa
cggaccaaagctgagcgagacaaggaactcttgggccagaaactgatgtacatggagcag
gaggctcaggcttccctgagaaatgagcaggtggcccacgaggaggatgtggaccggatc
cagcaagaaaaggagaccctgcgactggagctagaggcagagcgtgaggagctgctgcac
cgcctgacacaagaacgagaggagctggtggcccgctgtgaatcagaaaaggaggaaatg
agcgaggagatatcggctcttcaacaggaacgagacgagagtctcctgatggcagagaat
gagaaacagcaggccctttccttgaaggagtccgagaagaacattttgatggagaaactt
aacaacactcaacagagtttgtccaatctggcgatggaaactgagagatataaaagggag
tcatcaagtcggcaggagcaggatcggggcaccattaatgcactaacatctgagttgaag
gacttccgtgcccaatttgaagaagccatcaggactcatgagcgagaggcaaagggacta
caagaacaaagccgggagctacttaagcagcgggagtctgcactacgtgaggtagaggaa
ctaaagacccaactgcgtgtgctggaagatgcccgggactcaattcgcagagagctgatt
gaggcacatcgccgggtccgtgaaggtcaagaggagcaggaaattcagcgaaaggagtct
ctggatctacgccgtgccctcaacgatgaggctaaggagaaagaagcattgcagaagtcc
aatgaggaactgagggcaggagttaaacgagcagagagcgaacgcatcagcctgaagcgg
gccaatgaggaaaaggaacagaagctatccatcttagaggaggcaaggctagtagttgaa
aaggaggcggctgatctgcggtccagcctgcgggaggtagaaaagtcacgcttggaagct
cgtagggagctgcaggaactcaggcgtcaggtgaaaatgctcgacactgagaacactaaa
aagagcaaggaggtagcggaacttcaggcccgcatgtccatagacgagcaacgggacgag
gagaaccggcgggagaccttcagcctgaagcagaagattatggagacagaagccagccgg
gaatcttcaaggaaagaggtcagcagcctacacaggaagatggcggaattagagaacgag
ttccgtgtgcgtgagaaggacctgctgggtagcttggaggaggcgcgtgggaacgagaag
aagctgcaagataatgcccgcaacctggagatcaagctggaaactgcccacgcagaggcc
tcggagttgggcctacgccttagtgcagctgaggggcgcatccaggggctggaggcggag
ctggcaagggtggaaggcatgaagcgagatgtggagttcaagctgggcagcctgcactct
gcactacggcgtacactgggcatcagccgggcagggcgcaaccccagcccggccatcaga
ggccgcagcagctccccgaagagacctttctcccccaccaaaggttttgacaacacgttc
acaactaccacagatgggcgtggcagccccattccacaaactggcactccagaccgtggc
acacgcatactttcacctgatcgagcacattctccaagccggggagagcagctggtggca
gatatagaccctgaggtggtgcgtgctgctcttcgagatttcctgcaggagctaagggat
acgcagcgagagcgggatgaagttcgaacacaggcaagcaccttgacccgtcagctagtg
gagatggaatcagaccgagacagtgccaccacccgtctgcagcagctgcagaaagtcctg
tcagaatgtgaggaaggtaaacgcagttcagatggaaagctgagcggtgtgcagaccacc
ttgatgctgcaggaggagaccttgcgacgcaatgaacgggagcgcaaggctgcactggaa
aaggtgaccaatctcgagcggagtctgcaggctgcagacagtgagagaaggaccatacag
gagaagattgtgaaaatgaaatccaatgaaaccaaactggaaggtgataaacgccgcttg
aaggagatcctggatgcatcagagagccgctgcacacggcttgagctagcccgccgagcc
cttgagggagagttgcagcgcactcggctagtgcttaatgatcgcgagacagaggtgcag
gctctgcaggatcgcattgaaacgctacagaaacaggtgaccgagggagagatgaaagct
gatgcacgacaggtttctgtggaccgactcactgcagctctggcaaagtcggaggaaagc
gaaggttccttgaaagagaaagtacaaagcctgactgccttggtgtctgagggtcaggcc
agcacaaccacttgtcaggagaagagtctgcagctgcagaagatgctgacctccagtgag
catgaacgcagggtgctgcaggaacggctggatgcggcccgtcaggctatgacagaggcc
aagaagcaaaatggcgcactgcaggaccgaattcaggagctgaagaatgaacaggctgag
ctggaactgcagaaggcagacctggagggacaggtgcggcagcagcaagagttactccgc
cagcatgaggagacggaaggggcatctcttcgtaacataaagaagattcaagaggagcgt
gctctcttacaggagcgactgagtggtctgcagcgagctgtggtgcaactggagagtgaa
aagcgtgagacagagcgagcttcgatgcgactggaaaaggacaagactgcactaaggaag
acccttgacaaggtggagcgtgagaagctgaagactgaggaagacaccatgcgtctttca
gcagagaaagggcgtctggaccgttcactcacctcagtagagcaggatttggtggatgca
cagagacaggttcagcaactggaggcggacatcgacagggttaggaagaagattacctat
ggcctggcacaaatagctgacatggagcagacacactcgcaaagtctaatggagtcagtt
actcgtcaccggcaggagctgcagcaggagatcgagagactgcggagctcccaactccag
gcagagcgtaccttagatgcacgtgagcgtgctcaccgccagcgtgtgaaaggactggaa
gagcagatctccatgctgaaggaccaattgcagcaggagcttcgaagatgccagcctcat
tactcctccatcctctctgggaactga
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integrated database retrieval system
