Pleurodeles waltl (Iberian ribbed newt): 138300934
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Entry
138300934 CDS
T10800
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04510
Focal adhesion
pwl04517
IgSF CAM signaling
pwl04518
Integrin signaling
pwl04519
Cadherin signaling
pwl04520
Adherens junction
pwl04810
Regulation of actin cytoskeleton
pwl04820
Cytoskeleton in muscle cells
pwl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138300934 (VCL)
04518 Integrin signaling
138300934 (VCL)
04519 Cadherin signaling
138300934 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138300934 (VCL)
04520 Adherens junction
138300934 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138300934 (VCL)
04810 Regulation of actin cytoskeleton
138300934 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138300934 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138300934 (VCL)
04147 Exosome [BR:
pwl04147
]
138300934 (VCL)
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138300934 (VCL)
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138300934 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
TetR_C_13_2
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
138300934
NCBI-ProteinID:
XP_069096938
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All DBs
Position
6:1438864261..1439169208
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AA seq
1129 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPELTAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFSKVENACTKLVQAAQMLHADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSRSQGIEEALKNRNFTVEKMSSE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKINQAKEWLRDPNAPPGDAGEQAIR
QILDEAGKVGELCAGRERRDILGTCKTLGQMTDQVSDLRARGQGASPAAMQKAQQIAQGL
EMLTGKVQNAAGKLEAMTNSKQAIAKKIDAAQNWLADPNGGPEGEENIRGILAEAKRIAD
LCEDPKEREDILRSLGEIAMQTAKLSDLRRQGKGDSPEARALAKQIATSLQNLQSKTNRA
VANSRPAKAAVNLEGKIEQAQRWIDNPSIEDRGVGQTAIRGLVAEGRRLANAMSGPYRQD
MLAKCDRVEQLSGHLAELAARGEGDTPQARAVAAQLQESLKDLKAKMQEAMTQEVSDVFS
DTTTPIKLLAVAATSPPDAPNREEVFNERAANFENHAARLGATADKAAAVGTANIATVEG
IQATVKTSRELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDIDKCKVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKNASDELSKTISPMVMDAKAVAGNISDPNLQKGFLDSGFRILGAVAKVREAFQPPEP
EFPPPPDIEQLHLTDEPAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKVGELVNQPIMVA
AQQLHEEARKWSSKPDVTPEVEEDDDEDADDVEFTLPSDMEDDYEPELLLMPPNQLVNQP
ILAAAQALHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGVSGNKRALIQCAKDIAKA
SDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESE
QATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWARKTPWYQ
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttccacacaaaaacaatcgagagcatcctggagcctgtggctcaacagatc
tcgcacctggtcatcatgcacgaggagggagaggtggacggcaaggcaattcctgagctg
accgcccctgtagctgctgtgcaggcagcagtcagcaacctcgtccgggttgggaaagaa
actgttcagaccacggaggaccagatcatgaaacgggacatgcctccagcattttccaag
gtggagaatgcctgcactaagcttgtacaggctgctcagatgctgcatgcggatccctac
tctgtccctgctcgagattacctcattgatggttccagaggaatcctgtctggaacatca
gacttgctgctgaccttcgatgaggccgaggtccgtaaaattattcgtgtgtgcaaaggg
atcctggagtacctgactgtggcagaggtggttgagagcatggaagacctagtgacctac
accaagaacctgggacctggaatgaccaagatggcaaaaatgattgacgagcggcaacag
gagctgactcaccaggagcaccgtgtgatgttggtgaactccatgaacactgtgaaggaa
ctgctccccgtgctcatctcagctatgaagatctttgtgacaacaaagaactcaagaagt
cagggaattgaagaagctttgaagaaccgcaacttcacagttgagaagatgagcagcgag
atcaatgagattatccgagtgctgcagctgacctcatgggacgaagatgcctgggccaac
aaggacactgaagccatgaagcgggccttggcgctcatcgactccaagatcaaccaggcc
aaggagtggctccgagatcccaacgccccaccaggagatgccggggagcaggccatcaga
caaattctagacgaggctggcaaagttggagaactctgcgcaggacgggagcgcagggac
atcctgggaacttgcaaaactcttgggcagatgactgatcaggtgtcggacctccgagct
aggggacaaggggcatctccagcggccatgcagaaagctcaacagattgcgcaggggttg
gaaatgctgactgggaaggtgcagaacgctgctgggaagctggaggccatgaccaactcc
aaacaggcaatcgccaagaaaatcgatgctgcccagaactggctagctgacccgaatggg
ggccccgagggggaggagaatatccgaggcattctggctgaagcaaagcggattgcggac
ctgtgtgaggaccccaaagagagggaggatatcctgcgatcacttggagaaatagccatg
cagacagccaagctgtctgatctaaggagacaggggaagggagactctccagaagcccga
gctttggctaagcaaatcgccacttctctgcagaaccttcagtctaagaccaacagggct
gtcgctaacagccgtcctgccaaagcggctgtcaatcttgagggcaaaatcgagcaggct
cagcgctggatcgacaaccccagcattgaagatcgtggagtgggtcagacggctatccga
ggtctggttgccgaaggccgtcggctggcaaacgccatgtcaggtccctaccgtcaggac
atgctggctaaatgtgaccgggtggagcagttatctggacatctggcagagctcgctgct
agaggggagggagatactccgcaagccagggcggttgcggctcagctgcaggaatcttta
aaggatttgaaagcaaagatgcaagaagcaatgacccaggaggtgtctgatgttttcagt
gataccacaacacctatcaagctgttagctgtggcagctacttcccctccagatgctccc
aatcgggaggaggtgtttaacgaacgggcggctaactttgagaaccacgcagctcggctt
ggagctacagcagataaagcagcagctgttggaactgctaatatcgctacagtagaaggc
atccaagccacggtcaagacatccagagaactaactccccaggtggtgtctgcagcacgc
atcctcctccggaacccaggaaaccaggctgcttatgagcactttgagaccatgaagaat
caatggattgataatgtggagaagatgactgggctcgtggatgaagcaattgacactaag
tctttgttggatgcatcagaggaggcaatcaagaaggatattgacaaatgcaaggtggcc
atggcaaatgtgcagccccagatgctggtggctggtgccaccagcattgcacgtcgtgcc
aaccgcatcctcctggttgccaaaagagaggtggagaattcagaggaccccaaattccgt
gaagcggtgaagaatgcatctgacgagctaagcaaaaccatctcacccatggtgatggat
gccaaagccgtggcagggaatatttcagatccaaatctgcagaaaggtttcctggattct
ggattcaggattttgggagcagtggccaaagtccgggaggcattccaacctccggagcct
gaattccctcctcctcctgatattgagcagcttcatctgacagatgaacctgctcctccc
aaaccaccactgcccgagggtgaggttcctcctcccaggccccctcctcctgaagagaag
gatgaggagttcccagagcagaaagttggggaacttgttaaccagcccatcatggtggca
gcccaacagctccacgaggaggccaggaagtggtctagcaagcctgacgtgaccccagag
gtagaggaggatgatgatgaggatgcagacgatgttgagttcactttgccctcagacatg
gaagacgattacgagcctgagctgctcctaatgccgcccaatcagcttgttaaccagccc
attcttgccgccgcccaggccttgcatcgggaggcaaccaagtggtccagcaagggtaac
gacatcattgcagcagcaaaacgaatggcactgctgatggcagaaatgtcgcgcctggtc
aggggggtgagtgggaacaaacgtgccctgatccagtgtgctaaggacattgccaaggct
tcggatgaggtcacacgtcttgccaaggaggttgctaagcagtgcacagacaagcggatc
cggaccaatctgctccaggtctgtgagcgaattcccactattagcacccagttgaagatt
ctgtctacggtgaaagcaaccatgctgggaagaaccaacatcagtgaggaggagtctgag
caggccacagaaatgctggtgcacaatgcgcagaacttgatgcagtcggtgaaggagacc
gtgcgcgaggccgaggcagcttctatcaagatccggacagatgcgggcttcacgctgcgc
tgggcacgcaagacaccgtggtaccagtaa
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