Pleurodeles waltl (Iberian ribbed newt): 138301208
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Entry
138301208 CDS
T10800
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl02010
ABC transporters
pwl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138301208 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
138301208 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138301208 (ABCA2)
Transporters [BR:
pwl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138301208 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
138301208
NCBI-ProteinID:
XP_069097549
LinkDB
All DBs
Position
6:complement(1598880014..1599380002)
Genome browser
AA seq
2489 aa
AA seq
DB search
MGFLHQLHLLLWKNITLKRRSPWVLTFEIFIPLVLFFILLGLRQKKPTIPVKEAFYTAAP
LTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQLLERINEVVQESNLFDPDRPGLDDEL
HSLRRHLESLGSDPYSLGNADSQKGLTLDSVVKDKSGFRQFLTQNLSLPTETAAMLLESK
INLKEVYRLFLSSAPSSTDDGLANEPWDRFGAGEVFHLQQHLLGGWKNLEKGLIHNALND
PKTLTHRQALMQLLSQALGLAGPAESTHPYDPQSFVTELESILFTPSLLEALTCEGSQDE
LQRILVIPENQSSRLSAYHSAICNGSLDIRREHFRELAAELKDQLDIPKTVSKLHLDEVN
STAAQHRLHALLEDLMEVEKILKDVDILSALAKLLPKGACASKVPSPLSNATNWGSNFTT
SNTTSEEGEEEQATENPRSQFSAFVQLWAGLQPILCGNNRTIEPEALKQGNMSSLGFTNK
EQRNLGLLVHLMTTNPKILYSPVGTEVDKVIMKANETFALVGNVTHYAQVWLNISSEIRT
SLEEGKLQRRIQWLQEFVEGLQKHPEVLNASDSDILRSIINSNFSMPNASTLLQQLDTID
NAACGWIQFMSKVSVDIFKGFPNEESIVNYTLNQAYHDNVTVFASVIFQTREDGTLPPHV
MYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMDRAIINTFVGHDVVE
PGSYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEHRLKEVMKMM
GLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDVFIIWLFLSIYAVATIMFCF
LVSVVYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLG
SKYFALYEVAGVGIQWRTFSQSPVEGDDFNLMLSMMMLIIDAVVYGVLTWYIEAVHPGMY
GLPRPWYFPFQKSYWLGSGRIETWEWSWPWSRTTRLSIMEEDQACAMESRRMEETRGIEE
EPTHLPLVVCIDKLTKVYKTDKKMALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLF
PPTSGSATIYGYDIRTEMNEIRKNLGMCPQHNVLFDKLTVEEHLWFYSRLKGMAEDEIRK
EMDKMIEDLGLSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAI
WDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLMCCGSPLFLKSTYGDGYKLTLV
KKQSDTRQVSDVGQTNSPSSCSETRVSQFIKNFIASCLLISDTNTELSYILPSEAVKKGC
FERLFQHLEQNLSDLQLTSFGLMDTTLEEVFLKVSEEDQSLENSDADIKESKKDAFHLAP
QMCPKPDANGEPPQEEAAVALEKSETGNRIYGSPLAQASPCSSSSLGSVRGDEGGAYSEF
FGDYSPLFDNLQDPDNFSLQDQETEEELNDGQGSYKLEGSWLKLRQFHGLIVKRFHCAKR
NTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLILTPSQYHNYTQPKGNFIPYANEER
SDYRIKLSPDASPQQLVATFHLPSGIGATCVLKTPFNSTLDLLVQPLNLNSHQSKMLAAK
YFDAMCVDSFTQGLPLSNFVPPPPSPAPSDYPVSLDDDLLRLWNATMTYSTPVKETITSA
PSLPHLIHEPLRCTCSMQGTGFSCPSGVGGHPPLMKVVTGDILVDISGRNVSEYLLFTSD
RFRLHRYGALTFGNVQRSIPASFGVKARPMVRKIAVRRTAQIFYNNKGYHSMPTYLNTLN
NAILRANLPKSRGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFIIVAMSFVPA
SFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYIWDMLNYLVPATCCILILFVFDLPAYT
SPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQL
FEHDKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKMKSPFEWDI
VARGLVAMAVEGFVGFFITIMCQYNFLRKPQRLPVSSQPIEDDDVDVASERQRVLRGDAD
HDMLKIENLTKVYKSRKMGRILAVDRLCAGVRPGECFGLLGVNGAGKTTSFKMLTGDEST
TGGEAFINGHSILKELLQVQQSIGYCPQFDALFDELTAQEHLELYTRLRGIPWKDEERVV
KWAMEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPSFIFLDEPTTGMDPKARRFLWN
LILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLKCLGSIQHLKNRFGDGYMITVRT
KSSSNVKEVVRFFNRNFPEAILKERHHTKVQFQLKSEQISLAQVFSKMEQVVDVLGIEDY
SVSQTTLDNVFVNFAKKQSDNLEQQESLPSCAAQSPLSRILSLLRPHTTPTELRSLVVEE
SEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctgcaccagctgcacctcctgctctggaagaacatcaccctgaagcggcgg
agcccatgggtcctgaccttcgagattttcatccccttagttctgtttttcattctcctg
ggactgaggcagaagaagcccaccatccccgtgaaggaagccttctacaccgcagcacca
cttacctccgctgggatcctgccggtcatgcagtcgctgtgccccgatggccaaagagat
gagtttggcttcctgcagtattccaattccactgtaacccaactgttggaacgaataaat
gaggttgtgcaagagagcaatctgttcgatccagaccgacctggactggatgatgagctg
cactcgctccgaaggcacctggagtctctgggcagcgatccgtactccttggggaatgcg
gacagtcagaaaggacttacgttagactctgttgtgaaggacaagagtggatttcgccag
tttcttacgcagaatctctccctacccactgagactgcagccatgctactcgaatctaag
atcaacctgaaggaggtgtaccggctcttccttagctcagctccttcctccacagacgat
ggtctggcgaacgagccctgggacagatttggtgctggtgaagttttccatcttcagcag
caccttctcggcggctggaagaatttggagaagggtttgatccataatgctctgaatgac
cccaaaaccctcactcaccgtcaggccttgatgcaactcctttcccaggccttgggtctt
gctggccctgccgagtcaactcacccgtacgatcctcagtcctttgtaactgaacttgag
agcattctctttacaccatcgcttctggaagcattgacttgcgaaggaagccaggatgag
ctgcagcggatcctggtcatcccagagaatcagtcttccaggttgtcggcatatcactcg
gccatctgcaacgggagcctcgacatccgaagagagcacttcagggagttggccgcggag
cttaaggatcagcttgatatcccaaaaactgtcagtaagctccatctggatgaggtgaac
agcactgcggcccagcatcgcctccatgcccttctggaggacctgatggaggtggagaag
atacttaaagatgtggacattctctccgctctggcaaaactgctgccgaagggagcctgt
gccagcaaagtcccttctccgttatccaatgccaccaactggggcagcaacttcaccacc
agcaataccacctccgaagaaggggaggaggagcaggccacagaaaaccctcgaagtcag
ttctcggcctttgtccagctctgggcaggactgcagcccattctgtgtggtaacaacagg
acgattgagcccgaggccctaaagcagggaaatatgagctcactggggttcacgaacaag
gagcaacggaacctgggccttctggtccatctcatgaccacgaaccccaagatcctctac
tccccagtagggacggaagtggacaaggtcatcatgaaggccaatgaaacgtttgcactg
gtggggaacgtgacccactatgcacaggtgtggctgaacatctcatccgagatccggacc
tcattggaggaaggcaagcttcagaggcgcattcagtggctgcaggagtttgtcgaaggt
ttgcagaagcacccggaggtcttgaatgcctcagacagcgatatcctccgcagcatcatc
aacagtaacttctccatgcccaacgccagcaccctgctgcagcagctggacaccattgac
aacgctgcctgcggatggatccaattcatgtccaaggtcagcgtggacatcttcaaaggg
tttcccaatgaagagagcattgtgaactacaccctcaaccaggcgtatcacgacaatgtc
acagtgtttgccagtgtaatatttcagacgcgggaagatggaacgctcccgccacacgtg
atgtacaagatccgccagaactccagcttcacagagaaaaccaatgagattcgccgggcg
tactggaggccgggtccaaacactggggggcgcttctacttcctgtatggttttgtgtgg
atccaagacatgatggaccgtgccattattaacacatttgttggccatgacgtggtggaa
cccgggagctacgtgcagatgtttccgtacccgtgttatactagagatgactttctgttt
gtgattgaacacatgatgccactctgcatggtgatttcctgggtatattcggtggcaatg
atgatccagcacattgtagctgagaaggaacaccgcctgaaagaagtgatgaagatgatg
ggtttgaataacgcggtgcactgggtggcttggttcatcacaggctttgtccagctctcc
atttctgtcacggcactgaccgccatcttgaaatatggcaaagtcctgatgcacagcgat
gtcttcatcatctggctcttcttgtccatttatgccgtggccaccatcatgttctgtttc
ctcgtctccgtggtctactccaaggcgaagctggcatcagcctgcgggggcatcatttat
tttctgagttacgttccctacatgtatgttgccatccgggaggaagtggctcatgacaaa
atcaccgccttcgaaaagtgcatcgcttccctcatgtccacaactgcttttggactaggc
tctaagtactttgcgctatacgaggtggctggagtcggaatacagtggcgtaccttcagc
cagtcaccagtggagggcgacgacttcaatctgatgctgtccatgatgatgttgatcatt
gacgcagtggtctatggcgtgctgacgtggtacattgaagctgtgcatccagggatgtat
ggtctccctcgaccctggtacttccctttccagaaatcctattggcttggaagtgggcgc
attgagacatgggaatggtcatggccctggtccagaaccactcgtctcagcataatggaa
gaagaccaggcctgtgccatggaaagcaggcgaatggaagagactcgtgggattgaggag
gagccaacccacctccctctggttgtgtgcatagacaaactaaccaaagtgtacaagaca
gataagaagatggccctgaacaagctgagcctcaaccttcacgagaaccaggtggtgtcg
tttctgggacacaatggagctggcaaaaccaccaccatgtccattcttaccggcctcttc
ccgcccacctctggctctgccaccatttacggctatgacatccgaacagagatgaatgag
atacgaaagaatctgggaatgtgtccccagcacaatgtacttttcgacaagctcactgtg
gaggaacacctctggttttactcccgactcaagggcatggctgaggacgagatacgcaaa
gaaatggacaaaatgattgaagacctaggactgtccaacaaacggcactctttggtgcag
acgctctctggtgggatgaagaggaagctgtctgtagccattgcatttgtagggggatct
cgggcagttatcctagatgagccaactgctggtgttgatccttatgcacgtagagcaatc
tgggacctgatcctgaaatacaaacaaggacgtaccatcctgctctccactcaccacatg
gacgaggcggacctgctgggagacaggattgccatcatctcacatggaaagctgatgtgc
tgcggctcaccactgttcctgaagagcacctatggagatggctacaagctcacacttgtc
aagaagcagtccgacaccaggcaggtttcagatgtgggccagacaaacagcccctcttcc
tgttcagaaacccgcgtctcccagttcatcaaaaactttatagcctcctgtcttctcatc
tctgacactaacacagaactgtcctacatcctacccagcgaggctgtgaagaaaggctgc
tttgagaggctgttccagcacctggagcagaacctgtctgacctgcagctcaccagtttt
gggttgatggacacaacactggaggaggtattccttaaagtctcagaagaagatcagtcc
ctggaaaatagtgatgcagatattaaagagtccaaaaaggatgcttttcacctagctccc
cagatgtgccccaaacccgatgccaatggggaaccccctcaagaggaagcggcagttgca
ttggagaaatcagagacgggcaaccgaatctatggttcgccgctggcgcaggcctcaccg
tgctcctcatcctcgctgggctctgtgcgtggcgatgaaggtggggcttattccgagttc
tttggggactattcgcccctgtttgataatctgcaggaccctgataacttcagtttgcaa
gaccaggaaacagaagaagaattgaatgacgggcagggaagctacaaactggaggggtcg
tggctcaagttgcgacagttccatggcttgatagtaaagcggttccactgtgctaagcgc
aataccaaggctctcttttctcagatcctcttgcctgccttcttcgtctgtgttgcaatg
actgtggcactgtcggtgcctgagataggagaccttcccccattgattctgacaccatct
cagtatcacaactacacgcagccgaaggggaatttcataccttatgcaaatgaggagcgt
tcagattacaggataaagctgtcacctgatgctagtcctcagcagctggtagccaccttc
catcttccttctggcatcggggccacttgtgtcttgaagactccattcaacagcacactg
gatcttcttgtgcagcctctcaacttaaacagtcatcaatccaagatgctggcggccaag
tactttgatgccatgtgtgtggactcattcacccaggggctgcccctctccaactttgtt
cctcctcccccttcaccggctccatctgattacccggtttctttggatgatgatctcttg
cgcttgtggaatgctaccatgacttattctactcctgttaaagaaaccatcacctcagca
ccctccctgcctcatctcatccatgagcccctccgttgcacctgttcaatgcagggtact
ggcttttcctgccccagtggtgttggaggtcatccgcccctgatgaaggttgtgaccggt
gacatcttagtggacatcagtggacgtaatgtctcagagtatctcctgttcacatcggat
cgcttccgcttgcacagatatggcgctctaacttttggcaatgtccagcgatccatccca
gcatcgtttggcgtgaaagctcgtccgatggttcggaagattgcagtcagaaggacggct
cagatcttctacaataataagggttaccacagtatgcctacctaccttaacacattgaat
aacgccattctgagggccaacctgcccaagagtcggggcaaccctgctgcctatggaatc
acggtcaccaatcacccaatgaacaagaccagcgccagcctgtctctcgactacttgttg
caaggcacagatgtggtgatcgccatcttcatcatcgtagcgatgtccttcgtgccagca
agctttgtggtatttctggttgctgagaagtctaccaaggccaagcacctgcagtttgtc
agcggctgtaacccagtcatctattggttggctaattatatttgggatatgttgaattac
ctggtgcctgcaacctgttgcattctgattctctttgtcttcgacctgccggcctacact
tctcccaccaacttcccagcggtgctgtccctcttcttgctctatggttggtccatcacc
ccaatcatgtatcctgcctccttctggttcgaagtccccagtacggcctacgtgtttctg
atagtcatcaacctcttcattggaataactgccactgttgctacattcctgctacagctc
tttgaacatgataaggaccttaagctggtgaacagttacctaaagagttgcttcctgatc
tttcccaactacaacctgggccatgggctgatggagatggcttacaatgagtacatcaac
gaatactacgctaagataggtcagtttgataagatgaaatctcccttcgagtgggacatt
gttgccagaggcctggttgccatggcagtcgaaggctttgtgggcttcttcattaccatc
atgtgtcagtacaacttcctcagaaaaccacagcggctacctgtttcatcccaacccatt
gaggatgatgatgtagatgttgccagtgagcgacagcgtgttctgcggggggatgctgac
cacgacatgctgaagattgagaacctgaccaaggtctacaaatctcgcaaaatgggccgt
atactggcggtggatcgtctctgcgcaggtgtgcgtccgggggagtgttttgggttgctt
ggggtcaacggagctgggaaaaccaccagcttcaagatgctcacaggtgatgagagcacc
acaggaggggaagccttcatcaatggacatagcatcctgaaggagctcctgcaggtgcag
cagagcattggctactgccctcagtttgatgctttgtttgatgagctcacggcccaggag
cacctggagctttacacacgcctacgcgggattccatggaaggacgaagaaagggtggtg
aaatgggcgatggagaagctcgaactgaccaaatatgctgacaagccagccggaacctac
agtggagggaataagaggaagctctctacggcaatcgcactgattgggtatccatccttc
atcttcctggatgaaccaactactggaatggaccccaaagcccggcgtttcctctggaat
ctgatccttgacatcatcaaaactgggcgctccgtagtgcttacatcccacagcatggaa
gaatgtgaagcgctctgcacccggctggccatcatggtgaatgggcgcctgaaatgcctt
ggcagtatccagcacctgaaaaacaggtttggggatgggtacatgatcacagtacggacc
aagtccagctcaaacgtcaaggaagtggttcggttcttcaacagaaacttcccagaggcc
atccttaaggagcgacaccacaccaaggtacagtttcagctcaaatctgaacagatctca
ctggctcaggtatttagcaaaatggagcaggtggtggatgtgttgggcattgaagactat
tccgtcagccagaccactttggacaacgtgtttgtgaactttgctaagaagcagagtgat
aacctggagcagcaggaatctctccccagttgcgcagcccagtctccgttgtctcgcatc
ttgagcctgctccgaccgcacacaacccccacagagctgcgctccctggtggtagaagag
tctgaggatttggagaccgatgatgagggcttaatcagctttgaggaagaaagggctcag
ttgtccttcaacacggatacgctttgctaa
DBGET
integrated database retrieval system
