Pleurodeles waltl (Iberian ribbed newt): 138301358
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Entry
138301358 CDS
T10800
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138301358 (GAPVD1)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138301358 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
138301358
NCBI-ProteinID:
XP_069097850
LinkDB
All DBs
Position
6:1687128626..1687547108
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AA seq
1493 aa
AA seq
DB search
MVKLDIHSLAHHLKQERLYVNSEKQLIQRLNAEVLKTAEKLYHTSWISKQQRINLDRLIL
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETTYGEFLNRLRENPRLIASCLVAGEKL
NLECTQSVIHTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDDPRRLLRRGTCAFSI
IFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPAQQEKVFGEKGT
ERFKQKVQEMVEYNEGKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVG
EVRAMCTDLLLACLICPAIVNPEQYGIISDAPINEVARFNLMQVGSLLQQLAMTGSEERD
PRIRSSLGRFDKGCVAAFLDVVIGGRAVETPPLSSVNLLEGLSRTVVYMTYNHLFNLVAF
MRNVIFGNQLREEDRMALENLLATIPSNKPGKNSAIDVTPYSTPQLSPASTPANKKNRTP
IGQQLSAITAWETSATNLSAHINLVAPFAATRSRSKSNLVEQHTDNEGASQENIQEIVPD
EVLVISLGTGSLLTPGMMTENEVLNMQLAEGGQGEVPVDDTKLHGKPDKTLRFSLCSDNL
EGISEEEENQCSTGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQD
NLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEMAGAAAENM
LGSLLCLPGSGSLLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGL
GSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKTEDLRSECSSDFGGKDSVTSPDM
EDTVHVVQQLTSPPSQSDSVLAMFDPLSAGEVVRPKVHYARPSHPPPDPPILEGAPGGNE
ARLPMFGSHVLMSSDSEAFRQRHSFPDRLVRSRSSDIVSSGRRPMSDPGWNRRAGNEERE
PAFGGAAGLSGASLTAAPQSSSSSPSKDSSRGELEILKDSDDEKSDRNRPWWRKRFVSAI
PKAPIPFRKKEKQEKDRDDFGTDRFLLQDDGNPRLSAQAQAAEDILDKYRNAMKRTSTGE
AAIVNYENAEGVGDGESVHDSPRDEALQNITSDDLPDSASQVALPLDSVFSYRDAKKKLR
MALCSADAVAFPMLSHSTRNGLPDHNDPEDNEIVCFLKVQLAEAINLQDKNLLAQIQETM
RCVGRFDNRTCRKLLASVAEDYRKRAPYIAYLTRCRQGLQSTQAHLERLLQRVLRDKEVA
TRYFTTVCVRLLLESKEKNIQEFIKDFQRLTAADDKTAHVEEFLQSLYGAMAQDVIWQNA
SEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDSLRDQVLYEHIQRLSKVVTANHRALQIP
EVYLKEAPWPSAQGEIRTLSAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPV
LVFVLIKANPPCLLSTIQYINSFYANRLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagacatccattctttggcacatcacctcaaacaggagcgactttatgtg
aactctgagaagcaactcatccagcgactcaatgctgaagttctgaagacagcagagaaa
ttgtatcacacttcctggatatccaagcagcagaggataaacttggacagactcatactt
acaagtgcggaagcttctcctgctgaatgttgccaacatgccaaaatcctggaggacact
cagtttgttgatggttacaaacagttgggcttccaagagacaacctacggcgagttcctt
aacaggcttagggaaaacccccgacttattgcctcatgcctggttgcaggggaaaagctc
aatcttgagtgcacccaaagcgtcatccatacagtctttacatctctttatgggaactgc
ataatgcaagaggatgaaagctacctccttcaggtcttgcgttacttgattgagtttgaa
ctcaaggagagcgatgatccacgacgtctgttgagaagaggcacatgtgcattcagcatc
attttcaaacttttctcagaaggacttttttctgccaaactctttctcactgcaaccttg
catgagcccattatgcagttgttggttgaggatgaagaccacctagaaactgacccaaac
aagttgattgagcgtttttccccagcgcagcaagaaaaggtttttggggaaaagggcaca
gagagatttaaacagaaagtccaggaaatggtggaatataatgagggtaaacttgtggcc
ttggtgaacaaattcattggatacctcaagcagaacacctactgttttccacacagcttg
cgctggattgtgtctcagatgtataaaacgttgtcttgcgtagaaaggctggaggtgggg
gaggttcgggccatgtgcactgaccttcttttggcatgtttaatctgtccagcaatagta
aatccagagcagtatggaatcatctctgatgctcctatcaacgaggtggcacgatttaat
ctgatgcaggttggaagccttttgcaacagttggcaatgacaggttctgaagaaagagat
ccacgaatcaggagcagtcttggtagatttgacaagggctgtgttgctgcgttccttgat
gttgtcattggtgggcgtgctgtggaaactcctcccctatcctctgtgaaccttcttgaa
ggtttaagcaggactgttgtctatatgacatacaaccatctttttaatttggttgcattc
atgcggaatgtaatctttggcaaccagctaagagaagaagaccggatggcactagaaaac
ctgctcgcaacaataccaagtaataaaccagggaagaacagtgccattgatgtaactccc
tatagcaccccccagctgtcgccggcgagcacccccgccaacaaaaagaaccgcacgcca
ataggacaacaactatctgccataactgcctgggagacttcggccaccaatctctcggct
cacattaacctggtagccccatttgcagctactcgaagcagaagcaaatcaaatttagtc
gagcagcacacagacaacgaaggagcatcccaggaaaatattcaggaaatcgttccagat
gaagttttggttatttctttgggtacaggttccttgctaactccaggcatgatgactgaa
aacgaggttttgaacatgcagcttgcagagggaggacaaggagaggtgcctgttgacgat
accaaactgcatggtaaacctgataaaaccttgcgattttctctctgcagtgataatctg
gaaggaatatctgaagaagaggaaaatcaatgttcgacaggtccctcaaatcgttccaac
tctgtgtcttcgctggatttggaaggagaatctgtgtcggagttgggagcaggaccttcc
ggaagtaatggggtggaggcgttgcagttactggagcatgaacaagcaaccacccaagac
aaccttgatgacaaactgcgcaagtttgaaatcagagacatgatggggctcactgatgac
agggacatatctgaaacagttagtgaaacctggagcaccgatgtcctgggcagcgacttt
gacccaaacatagatgaagaccggttgcaagaaatggcaggtgcagctgcagagaacatg
ttgggcagtcttctgtgcttaccagggtctgggtcacttctacttgatccttgcactggc
tcaaccatctcggaaaccaccagtgaggcctggagtgttgaagtattgccaagcgactcg
gaagctccggacttaaagcaggaggagaggctgcaggagctggagagctgttctggctta
ggaagcacatctgatgacacagatgtccgagaagtcagctcccgccccagcactcccggc
ctgagtgtggtatctggcatcagtgcaacctccgaggacattcccaataagacagaggac
cttcgatctgagtgcagctctgactttggaggaaaagattcggttacaagtccagatatg
gaagacacggttcacgttgtgcagcagcttacttctcctccttctcagtctgattctgtg
cttgcaatgtttgaccctctgtctgcaggtgaagtggttcggcctaaggtgcattatgcg
aggccctctcatccaccgccagaccctccaattttggaaggagcccctggaggtaatgaa
gcaaggttgccgatgtttggctcccacgtacttatgtcatctgattctgaggcattcaga
cagaggcattccttccctgacagattagttcgcagccgcagctctgacattgtgtcatct
ggacgaagacccatgagtgatcctggctggaaccggcgggcaggcaatgaagaaagagag
cctgcttttgggggtgctgctggtctcagtggtgcatcattaacagcggctccccagtca
tcttcgtcgtcgcctagtaaagactcttccagaggagagcttgaaatcctgaaagatagt
gatgacgagaaatctgaccgcaacaggccgtggtggagaaagcgttttgtttctgcaata
cccaaagctcccataccttttagaaagaaggaaaaacaagaaaaagaccgagatgacttt
gggacggacaggttcttgctgcaagatgatggtaaccctaggctaagtgcacaagcgcag
gcagcagaggacatcctggacaaatacagaaatgccatgaaacggaccagtacaggagaa
gctgctatagtgaactatgaaaatgcagaaggtgttggtgatggtgaaagtgtccacgac
tccccaagggatgaggccttacagaatatcacttctgacgatctcccagactctgccagc
caagttgcacttcccctggactctgttttctcgtacagggatgctaagaagaagcttcgc
atggctctatgctcagcagatgcagtcgcttttcccatgctgtcccattccactcggaat
ggtctgccagatcacaatgacccagaagacaatgaaatagtgtgcttcctcaaagtgcag
ttagctgaagccatcaaccttcaggacaagaacctattggctcagattcaagaaactatg
cgctgtgtgggccgttttgataaccgaacatgtcgaaagctcctagcgtctgtagcagag
gactataggaaaagggctccatatattgcttatttaactcgatgccgtcagggtcttcag
agcacacaagctcatctagaaagacttctgcagagggtgctgcgagacaaagaagtggcc
acaagatactttacaacagtttgtgtgaggctattgctggagagcaaagagaagaatatt
caagaattcattaaagattttcagagactcacagcggcagatgataagactgcacatgtg
gaagaattccttcaatctttatatggcgcaatggcgcaagatgtcatctggcaaaatgcc
agcgaagagcagctgcaagatgcacagatggcaattgaacgtagtgtcatgaacagaatc
ttcaagcttgccttctatcctaaccaagacggagacagtcttcgagatcaggtcctttat
gagcatatccaaagattatccaaagtcgtcacagcaaaccacagagcactccaaatacca
gaggtgtacctcaaagaggctccatggccgtcagcacaaggtgaaatccggacactgagt
gcttacaaaacaccaagagacaaagtacagtgtatcctcagaatgtgttccaccatcatg
aatctgttgagcctagccaatgaggattctgttcctggcgcagatgactttgtccccgtt
cttgtcttcgttctgatcaaggccaacccaccttgtttgctatccaccattcaatacatc
aatagcttttatgccaaccgacttagtggagaagaatcctattggtggatgcagttcaca
gcagcagtagagttcatcaaaaccattgacgatcgcaagtaa
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integrated database retrieval system
